BLASTX nr result
ID: Cnidium21_contig00013842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00013842
(1123 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig... 291 2e-76
emb|CBI19874.3| unnamed protein product [Vitis vinifera] 291 2e-76
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] 289 8e-76
ref|XP_003591660.1| U-box domain-containing protein [Medicago tr... 288 2e-75
sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protei... 288 2e-75
>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1494
Score = 291 bits (746), Expect = 2e-76
Identities = 144/203 (70%), Positives = 164/203 (80%)
Frame = -3
Query: 1121 QVHDVKEAVLELVANNSIACFAPQGTGVKIYNWSGVPKYINFNKTVKCLAMMGNKLYCGC 942
QVHDVKEAV +L AN S ACF+ QGTGV +Y+WSGVPK+INFNK VK L M ++LYCGC
Sbjct: 1292 QVHDVKEAVYQLTANASFACFSSQGTGVNVYSWSGVPKHINFNKNVKSLDMAEDRLYCGC 1351
Query: 941 TAFSIQEVDLQKHTSTVFYSGARKLLGKQIVQSLHVHDNLLFAGGSSVDGIAGKVFSLST 762
T +SIQEVDL K T+ FYSGARKLLGKQ + SL +HD LL+AGGSSVDG AGKVFSLST
Sbjct: 1352 TGYSIQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYAGGSSVDGTAGKVFSLST 1411
Query: 761 KAVIGSLTTGLDIQCITVNNDFIFTATRFGTIEVWLKERVTRVASIKMGNGGNAKITCLT 582
KA+ GS TGLDIQ + VN+DFIFTA++ G IEVW KE VTRVASIK+G G+AKI L
Sbjct: 1412 KALTGSFLTGLDIQRLAVNSDFIFTASKSGIIEVWFKETVTRVASIKIGGHGHAKIASLA 1471
Query: 581 SDKDGQMLFAGSSDGKIQAWVLD 513
SD DG+MLFAG DGKIQAW LD
Sbjct: 1472 SDTDGEMLFAGFLDGKIQAWALD 1494
Score = 227 bits (579), Expect = 4e-57
Identities = 121/179 (67%), Positives = 135/179 (75%)
Frame = +2
Query: 5 KCLLDQFINVLQSSKNLEEKILVTLALSAFTNDPGAAGELGVYAKCMYKTLRKLKRNSVV 184
K L+ FINVLQSSKNLEEKIL TLAL+ F NDPGA ELG YAKCMYKTLRKLK+NSVV
Sbjct: 1120 KSFLEPFINVLQSSKNLEEKILATLALNCFLNDPGALEELGAYAKCMYKTLRKLKKNSVV 1179
Query: 185 VNDILKTLMNLPSVDAADMWCCAEGPELNSSMNGEVLALLHVKSRVISSHSDGTIKVWDA 364
V+D+LK L+ LPSVD ++WCC E EL+S NG +L+LL +KS V+S HSDGTIKVWDA
Sbjct: 1180 VSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTIKVWDA 1239
Query: 365 TKRVPRLIQEVREHTKAVTCLYVPSPGDKLYSGSLDKVKM*KEWTNLCFNPAPKPEFCH 541
KR RLIQEVREHTKAVTCLY S DKLYSGSLDK + WT KPE H
Sbjct: 1240 GKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTI--RVWT-------VKPEEIH 1289
>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
Length = 1510
Score = 291 bits (746), Expect = 2e-76
Identities = 144/203 (70%), Positives = 164/203 (80%)
Frame = -3
Query: 1121 QVHDVKEAVLELVANNSIACFAPQGTGVKIYNWSGVPKYINFNKTVKCLAMMGNKLYCGC 942
QVHDVKEAV +L AN S ACF+ QGTGV +Y+WSGVPK+INFNK VK L M ++LYCGC
Sbjct: 1308 QVHDVKEAVYQLTANASFACFSSQGTGVNVYSWSGVPKHINFNKNVKSLDMAEDRLYCGC 1367
Query: 941 TAFSIQEVDLQKHTSTVFYSGARKLLGKQIVQSLHVHDNLLFAGGSSVDGIAGKVFSLST 762
T +SIQEVDL K T+ FYSGARKLLGKQ + SL +HD LL+AGGSSVDG AGKVFSLST
Sbjct: 1368 TGYSIQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYAGGSSVDGTAGKVFSLST 1427
Query: 761 KAVIGSLTTGLDIQCITVNNDFIFTATRFGTIEVWLKERVTRVASIKMGNGGNAKITCLT 582
KA+ GS TGLDIQ + VN+DFIFTA++ G IEVW KE VTRVASIK+G G+AKI L
Sbjct: 1428 KALTGSFLTGLDIQRLAVNSDFIFTASKSGIIEVWFKETVTRVASIKIGGHGHAKIASLA 1487
Query: 581 SDKDGQMLFAGSSDGKIQAWVLD 513
SD DG+MLFAG DGKIQAW LD
Sbjct: 1488 SDTDGEMLFAGFLDGKIQAWALD 1510
Score = 227 bits (579), Expect = 4e-57
Identities = 121/179 (67%), Positives = 135/179 (75%)
Frame = +2
Query: 5 KCLLDQFINVLQSSKNLEEKILVTLALSAFTNDPGAAGELGVYAKCMYKTLRKLKRNSVV 184
K L+ FINVLQSSKNLEEKIL TLAL+ F NDPGA ELG YAKCMYKTLRKLK+NSVV
Sbjct: 1136 KSFLEPFINVLQSSKNLEEKILATLALNCFLNDPGALEELGAYAKCMYKTLRKLKKNSVV 1195
Query: 185 VNDILKTLMNLPSVDAADMWCCAEGPELNSSMNGEVLALLHVKSRVISSHSDGTIKVWDA 364
V+D+LK L+ LPSVD ++WCC E EL+S NG +L+LL +KS V+S HSDGTIKVWDA
Sbjct: 1196 VSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTIKVWDA 1255
Query: 365 TKRVPRLIQEVREHTKAVTCLYVPSPGDKLYSGSLDKVKM*KEWTNLCFNPAPKPEFCH 541
KR RLIQEVREHTKAVTCLY S DKLYSGSLDK + WT KPE H
Sbjct: 1256 GKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTI--RVWT-------VKPEEIH 1305
>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
Length = 1494
Score = 289 bits (740), Expect = 8e-76
Identities = 142/203 (69%), Positives = 163/203 (80%)
Frame = -3
Query: 1121 QVHDVKEAVLELVANNSIACFAPQGTGVKIYNWSGVPKYINFNKTVKCLAMMGNKLYCGC 942
QVHDVKEAV +L AN + ACF+ QGTGV +Y+WSGVPK+INFNK VKCL M ++LYCGC
Sbjct: 1292 QVHDVKEAVYQLTANANFACFSSQGTGVNVYSWSGVPKHINFNKYVKCLDMAEDRLYCGC 1351
Query: 941 TAFSIQEVDLQKHTSTVFYSGARKLLGKQIVQSLHVHDNLLFAGGSSVDGIAGKVFSLST 762
T +SIQEVDL K TS FYSGARKLLGKQ + SL +HD L+AGGSSVDG AGKVFSLST
Sbjct: 1352 TGYSIQEVDLCKSTSNTFYSGARKLLGKQTIYSLRIHDGFLYAGGSSVDGTAGKVFSLST 1411
Query: 761 KAVIGSLTTGLDIQCITVNNDFIFTATRFGTIEVWLKERVTRVASIKMGNGGNAKITCLT 582
KA+ GS TGLDIQ + VN+DFIFTA + G IEVW KE VT+VASIK+G G+AKI L
Sbjct: 1412 KALTGSFLTGLDIQRLAVNSDFIFTAGKSGIIEVWFKETVTKVASIKIGGHGHAKIASLA 1471
Query: 581 SDKDGQMLFAGSSDGKIQAWVLD 513
SD DG+MLFAG DGKI+AW LD
Sbjct: 1472 SDTDGEMLFAGFLDGKIRAWALD 1494
Score = 227 bits (579), Expect = 4e-57
Identities = 121/179 (67%), Positives = 135/179 (75%)
Frame = +2
Query: 5 KCLLDQFINVLQSSKNLEEKILVTLALSAFTNDPGAAGELGVYAKCMYKTLRKLKRNSVV 184
K L+ FINVLQSSKNLEEKIL TLAL+ F NDPGA ELG YAKCMYKTLRKLK+NSVV
Sbjct: 1120 KSFLEPFINVLQSSKNLEEKILATLALNCFLNDPGALEELGAYAKCMYKTLRKLKKNSVV 1179
Query: 185 VNDILKTLMNLPSVDAADMWCCAEGPELNSSMNGEVLALLHVKSRVISSHSDGTIKVWDA 364
V+D+LK L+ LPSVD ++WCC E EL+S NG +L+LL +KS V+S HSDGTIKVWDA
Sbjct: 1180 VSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTIKVWDA 1239
Query: 365 TKRVPRLIQEVREHTKAVTCLYVPSPGDKLYSGSLDKVKM*KEWTNLCFNPAPKPEFCH 541
KR RLIQEVREHTKAVTCLY S DKLYSGSLDK + WT KPE H
Sbjct: 1240 GKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTI--RVWT-------VKPEEIH 1289
>ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula]
gi|358346073|ref|XP_003637097.1| U-box domain-containing
protein [Medicago truncatula] gi|355480708|gb|AES61911.1|
U-box domain-containing protein [Medicago truncatula]
gi|355503032|gb|AES84235.1| U-box domain-containing
protein [Medicago truncatula]
Length = 1490
Score = 288 bits (736), Expect = 2e-75
Identities = 136/202 (67%), Positives = 164/202 (81%)
Frame = -3
Query: 1118 VHDVKEAVLELVANNSIACFAPQGTGVKIYNWSGVPKYINFNKTVKCLAMMGNKLYCGCT 939
V+DVKEAV EL AN +AC+ QGTGVK++NW PK+INFNK VKCLA+ G+KLYCGC+
Sbjct: 1290 VYDVKEAVYELAANAKLACYVTQGTGVKVFNWLDAPKFINFNKYVKCLAVSGDKLYCGCS 1349
Query: 938 AFSIQEVDLQKHTSTVFYSGARKLLGKQIVQSLHVHDNLLFAGGSSVDGIAGKVFSLSTK 759
+SIQEVDL K+TST F++G RKLLGKQ + SL +HD+LLFA GSS+D AGK+FSLS+K
Sbjct: 1350 GYSIQEVDLSKYTSTSFFTGTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSK 1409
Query: 758 AVIGSLTTGLDIQCITVNNDFIFTATRFGTIEVWLKERVTRVASIKMGNGGNAKITCLTS 579
V+GSL+TGLD+ + +N+DFIF T+FGTIEVWLK++ TRVASIKM GGN KIT L S
Sbjct: 1410 MVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMA-GGNTKITSLAS 1468
Query: 578 DKDGQMLFAGSSDGKIQAWVLD 513
D DG MLF GSSDGKIQ W LD
Sbjct: 1469 DADGMMLFVGSSDGKIQVWALD 1490
Score = 180 bits (456), Expect = 7e-43
Identities = 96/158 (60%), Positives = 116/158 (73%)
Frame = +2
Query: 2 RKCLLDQFINVLQSSKNLEEKILVTLALSAFTNDPGAAGELGVYAKCMYKTLRKLKRNSV 181
RK LL+ +NVLQSSKNLEEKIL +LAL +F +DP L VYAK +Y+ LRKLK+ S
Sbjct: 1118 RKSLLEALMNVLQSSKNLEEKILASLALKSFISDPTVHEVLRVYAKSIYRILRKLKKYST 1177
Query: 182 VVNDILKTLMNLPSVDAADMWCCAEGPELNSSMNGEVLALLHVKSRVISSHSDGTIKVWD 361
V DILK L+NL SVD ++W C E EL+ S NGEVL+L ++ +V+S H+DGTIKVWD
Sbjct: 1178 VAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGTIKVWD 1237
Query: 362 ATKRVPRLIQEVREHTKAVTCLYVPSPGDKLYSGSLDK 475
A KR+PR+IQE REH KAVT L S DKLYS SLDK
Sbjct: 1238 ARKRIPRVIQETREHKKAVTSLC--SSVDKLYSSSLDK 1273
>sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protein ligase LIN; Short=MtLIN
gi|219522090|gb|ACL14419.1| putative E3 ubiquitin ligase
[Medicago truncatula] gi|219522092|gb|ACL14420.1|
putative E3 ubiquitin ligase [Medicago truncatula]
Length = 1488
Score = 288 bits (736), Expect = 2e-75
Identities = 136/202 (67%), Positives = 164/202 (81%)
Frame = -3
Query: 1118 VHDVKEAVLELVANNSIACFAPQGTGVKIYNWSGVPKYINFNKTVKCLAMMGNKLYCGCT 939
V+DVKEAV EL AN +AC+ QGTGVK++NW PK+INFNK VKCLA+ G+KLYCGC+
Sbjct: 1288 VYDVKEAVYELAANAKLACYVTQGTGVKVFNWLDAPKFINFNKYVKCLAVSGDKLYCGCS 1347
Query: 938 AFSIQEVDLQKHTSTVFYSGARKLLGKQIVQSLHVHDNLLFAGGSSVDGIAGKVFSLSTK 759
+SIQEVDL K+TST F++G RKLLGKQ + SL +HD+LLFA GSS+D AGK+FSLS+K
Sbjct: 1348 GYSIQEVDLSKYTSTSFFTGTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSK 1407
Query: 758 AVIGSLTTGLDIQCITVNNDFIFTATRFGTIEVWLKERVTRVASIKMGNGGNAKITCLTS 579
V+GSL+TGLD+ + +N+DFIF T+FGTIEVWLK++ TRVASIKM GGN KIT L S
Sbjct: 1408 MVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMA-GGNTKITSLAS 1466
Query: 578 DKDGQMLFAGSSDGKIQAWVLD 513
D DG MLF GSSDGKIQ W LD
Sbjct: 1467 DADGMMLFVGSSDGKIQVWALD 1488
Score = 180 bits (456), Expect = 7e-43
Identities = 96/158 (60%), Positives = 116/158 (73%)
Frame = +2
Query: 2 RKCLLDQFINVLQSSKNLEEKILVTLALSAFTNDPGAAGELGVYAKCMYKTLRKLKRNSV 181
RK LL+ +NVLQSSKNLEEKIL +LAL +F +DP L VYAK +Y+ LRKLK+ S
Sbjct: 1116 RKSLLEALMNVLQSSKNLEEKILASLALKSFISDPTVHEVLRVYAKSIYRILRKLKKYST 1175
Query: 182 VVNDILKTLMNLPSVDAADMWCCAEGPELNSSMNGEVLALLHVKSRVISSHSDGTIKVWD 361
V DILK L+NL SVD ++W C E EL+ S NGEVL+L ++ +V+S H+DGTIKVWD
Sbjct: 1176 VAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGTIKVWD 1235
Query: 362 ATKRVPRLIQEVREHTKAVTCLYVPSPGDKLYSGSLDK 475
A KR+PR+IQE REH KAVT L S DKLYS SLDK
Sbjct: 1236 ARKRIPRVIQETREHKKAVTSLC--SSVDKLYSSSLDK 1271