BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013769
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subun...   248   3e-69
ref|YP_740150.1| ribosomal protein S11 [Daucus carota] gi|122239...   261   1e-67
ref|YP_007317281.1| ribosomal protein S11 (chloroplast) [Camelli...   259   6e-67
ref|YP_004222679.1| ribosomal protein S11 [Anthriscus cerefolium...   259   6e-67
gb|ADM92735.1| ribosomal protein S11 [Franklinia alatamaha]           257   2e-66

>ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subunit alpha-like [Cucumis
           sativus]
          Length = 466

 Score =  248 bits (634), Expect(2) = 3e-69
 Identities = 122/130 (93%), Positives = 127/130 (97%)
 Frame = -2

Query: 554 MAKTIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 375
           MAK IPRIGSR+NGRI SRK+TRRIPKGVIHVQASFNNTIVTVTDVRGRV+SWSSAGTCG
Sbjct: 1   MAKPIPRIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60

Query: 374 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 195
           FKGTRRGTPFAAQTAAGNAIR VVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILL+F+R
Sbjct: 61  FKGTRRGTPFAAQTAAGNAIRGVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIR 120

Query: 194 DVTPMPHNGC 165
           DVTPMPHNGC
Sbjct: 121 DVTPMPHNGC 130



 Score = 40.0 bits (92), Expect(2) = 3e-69
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -3

Query: 64  REKVTVSTRTLQWKCVESKAD 2
           R+K+ VSTRTL+WKCVES+AD
Sbjct: 136 RQKIRVSTRTLKWKCVESRAD 156


>ref|YP_740150.1| ribosomal protein S11 [Daucus carota]
           gi|122239959|sp|Q0G9S9.1|RR11_DAUCA RecName: Full=30S
           ribosomal protein S11, chloroplastic
           gi|113200940|gb|ABI32456.1| ribosomal protein S11
           [Daucus carota] gi|156573730|gb|ABU85197.1| ribosomal
           protein S11 [Anethum graveolens]
          Length = 138

 Score =  261 bits (667), Expect = 1e-67
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -2

Query: 554 MAKTIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 375
           MAKTIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG
Sbjct: 1   MAKTIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60

Query: 374 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 195
           FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR
Sbjct: 61  FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120

Query: 194 DVTPMPHNGC 165
           DVTPMPHNGC
Sbjct: 121 DVTPMPHNGC 130


>ref|YP_007317281.1| ribosomal protein S11 (chloroplast) [Camellia sinensis]
           gi|430728305|gb|AGA55629.1| ribosomal protein S11
           (chloroplast) [Camellia sinensis]
          Length = 138

 Score =  259 bits (661), Expect = 6e-67
 Identities = 128/130 (98%), Positives = 130/130 (100%)
 Frame = -2

Query: 554 MAKTIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 375
           MAKTIPRIGSR+NGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG
Sbjct: 1   MAKTIPRIGSRRNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60

Query: 374 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 195
           F+GTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR
Sbjct: 61  FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120

Query: 194 DVTPMPHNGC 165
           DVTPMPHNGC
Sbjct: 121 DVTPMPHNGC 130


>ref|YP_004222679.1| ribosomal protein S11 [Anthriscus cerefolium]
           gi|289645608|gb|ADD13671.1| ribosomal protein S11
           [Anthriscus cerefolium]
          Length = 138

 Score =  259 bits (661), Expect = 6e-67
 Identities = 129/130 (99%), Positives = 129/130 (99%)
 Frame = -2

Query: 554 MAKTIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 375
           MAK IPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG
Sbjct: 1   MAKPIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60

Query: 374 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 195
           FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR
Sbjct: 61  FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120

Query: 194 DVTPMPHNGC 165
           DVTPMPHNGC
Sbjct: 121 DVTPMPHNGC 130


>gb|ADM92735.1| ribosomal protein S11 [Franklinia alatamaha]
          Length = 138

 Score =  257 bits (657), Expect = 2e-66
 Identities = 127/130 (97%), Positives = 129/130 (99%)
 Frame = -2

Query: 554 MAKTIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 375
           M KTIPRIGSR+NGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG
Sbjct: 1   MTKTIPRIGSRRNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60

Query: 374 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 195
           F+GTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR
Sbjct: 61  FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120

Query: 194 DVTPMPHNGC 165
           DVTPMPHNGC
Sbjct: 121 DVTPMPHNGC 130