BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013736
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I sub...   135   6e-30
emb|CBI19898.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian...   127   2e-27
ref|XP_002318989.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002875292.1| transcription factor S-II domain-containing ...   124   1e-26

>ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449450516|ref|XP_004143008.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449450518|ref|XP_004143009.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus] gi|449500372|ref|XP_004161079.1| PREDICTED:
           DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449500375|ref|XP_004161080.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449500379|ref|XP_004161081.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus]
          Length = 116

 Score =  135 bits (339), Expect = 6e-30
 Identities = 66/120 (55%), Positives = 81/120 (67%)
 Frame = -2

Query: 372 MEYCHQRDFLFCNICGTMLSLDSTKFAHCPLCKYKRKAKEIVDREISYTISAEDIRMALG 193
           M Y    DFLFCN+CGTMLS  STK+  CP CK +R AKEIV REISYT++AE+IR  LG
Sbjct: 1   MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLG 60

Query: 192 ISTFDDDEGEKDKKAIDYSARCKNCPKVGLQYEARQMRSADEGQTIFFTCTDCGHTRTEN 13
           IS  D+++ +  K+      RC+ C      +E+RQMRSADEGQT F+TCT C H   EN
Sbjct: 61  ISLIDEEKMQLAKE----RRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN 116


>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score =  133 bits (335), Expect = 2e-29
 Identities = 66/126 (52%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
 Frame = -2

Query: 372 MEYCHQRDFLFCNICGTMLSLDSTKFAHCPLCKYKRKAKEIVDREISYTISAEDIRMALG 193
           M Y  QRDF+FCN+CGTML + STK+A CPLCK +RK K+I  REI YT+SAEDIR  L 
Sbjct: 1   MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELN 60

Query: 192 ISTFDDDEG----EKDKKAIDYSARCKNCPK-VGLQYEARQMRSADEGQTIFFTCTDCGH 28
           I  F   +G    E + +      RC  C +   L Y  RQ+RSADEGQTIF+ CT CGH
Sbjct: 61  IEPFVKLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGH 120

Query: 27  TRTENS 10
             ++N+
Sbjct: 121 KWSQNT 126


>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
           gi|9279599|dbj|BAB01057.1| unnamed protein product
           [Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
           putative RNA polymerase I subunit [Arabidopsis thaliana]
           gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
           thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
           protein [Arabidopsis thaliana]
          Length = 119

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/119 (51%), Positives = 79/119 (66%)
 Frame = -2

Query: 372 MEYCHQRDFLFCNICGTMLSLDSTKFAHCPLCKYKRKAKEIVDREISYTISAEDIRMALG 193
           ME   + +FLFCN+CGTML L STK+A CP CK  R AK+I+D+EI+YT+SAEDIR  LG
Sbjct: 1   MEKSRESEFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAEDIRRELG 60

Query: 192 ISTFDDDEGEKDKKAIDYSARCKNCPKVGLQYEARQMRSADEGQTIFFTCTDCGHTRTE 16
           IS F  ++ + + +       C+ C    L Y  RQ RSADEGQT ++TC +C H  TE
Sbjct: 61  ISLF-GEKTQAEAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|XP_002318989.1| predicted protein [Populus trichocarpa] gi|222857365|gb|EEE94912.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/120 (48%), Positives = 83/120 (69%)
 Frame = -2

Query: 372 MEYCHQRDFLFCNICGTMLSLDSTKFAHCPLCKYKRKAKEIVDREISYTISAEDIRMALG 193
           M +    DF+FC++CGTM+ L S +   CPLCK+K+ AK++ +REISY +S+ED+R  LG
Sbjct: 1   MAHARGGDFMFCDLCGTMMFLYSKEHVECPLCKFKKSAKDLSEREISYQVSSEDMRRDLG 60

Query: 192 ISTFDDDEGEKDKKAIDYSARCKNCPKVGLQYEARQMRSADEGQTIFFTCTDCGHTRTEN 13
           IS F   EG+ + K ++ + +C+ C    L++  RQMRSADEGQT FF C +C +T TEN
Sbjct: 61  ISHF---EGKMEVKDMEINKKCEKCGHTKLKFSTRQMRSADEGQTTFFHCANCSYTFTEN 117


>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
           transcription factor S-II domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 119

 Score =  124 bits (311), Expect = 1e-26
 Identities = 60/119 (50%), Positives = 79/119 (66%)
 Frame = -2

Query: 372 MEYCHQRDFLFCNICGTMLSLDSTKFAHCPLCKYKRKAKEIVDREISYTISAEDIRMALG 193
           ME   +  FLFCN CGTML L STK+A CPLCK  R AKEI++++I+YT++AEDIR  LG
Sbjct: 1   MEKSRESGFLFCNWCGTMLVLKSTKYAECPLCKTTRNAKEIINKDIAYTVTAEDIRRELG 60

Query: 192 ISTFDDDEGEKDKKAIDYSARCKNCPKVGLQYEARQMRSADEGQTIFFTCTDCGHTRTE 16
           IS F  ++ +++ +       C+ C    L Y  RQ RSADEGQT ++TC +C H  TE
Sbjct: 61  ISLF-GEKTQEEAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118