BLASTX nr result

ID: Cnidium21_contig00013690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013690
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311320.1| SET domain-containing protein [Populus trich...   154   7e-36
gb|AAC29136.1| ribulose-1,5-bisphosphate carboxylase/oxygenase N...   153   1e-35
gb|AAC29137.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   153   1e-35
ref|XP_002522479.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   151   6e-35
ref|XP_002267249.1| PREDICTED: probable ribulose-1,5 bisphosphat...   151   6e-35

>ref|XP_002311320.1| SET domain-containing protein [Populus trichocarpa]
           gi|222851140|gb|EEE88687.1| SET domain-containing
           protein [Populus trichocarpa]
          Length = 490

 Score =  154 bits (389), Expect = 7e-36
 Identities = 82/129 (63%), Positives = 91/129 (70%)
 Frame = +1

Query: 100 STLFYLNPSSSILKHHHSHFKTPSKRSSFYINSXXXXXXXXXXEVQTFWQWLSDEKVVTH 279
           ST F  NPS         HFK P   +SF               VQTFWQWLSD+ VV+ 
Sbjct: 18  STFFTKNPSL--------HFKKPLSVTSFQ----SPPAAAAAAAVQTFWQWLSDQDVVSA 65

Query: 280 KSPAKPGVVAEGLGLVAQRDISRNEVVLEIPKKFWINPDTVAASEIGNVCSGLKPWVCVA 459
           K+PA+PG+V +GLGLVAQRDISRNEVVLEIPKK WINPD VAASEIGNVC G+KPWV VA
Sbjct: 66  KTPARPGLVPQGLGLVAQRDISRNEVVLEIPKKLWINPDVVAASEIGNVCGGVKPWVSVA 125

Query: 460 LFLIREKLR 486
           LFLIREKL+
Sbjct: 126 LFLIREKLK 134


>gb|AAC29136.1| ribulose-1,5-bisphosphate carboxylase/oxygenase N-methyltransferase
           [Spinacia oleracea] gi|3403238|gb|AAC29138.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit N-methyltransferase II [Spinacia oleracea]
          Length = 495

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 10/138 (7%)
 Frame = +1

Query: 97  MSTLFYLNPSSS--------ILKHHHSHFKTPSK--RSSFYINSXXXXXXXXXXEVQTFW 246
           M+TLF L PSS+          +H   HF TPS   ++   I            E+Q FW
Sbjct: 1   MATLFTLIPSSNSTFLNPFKTTQHSKLHFATPSPTFKNPLSIRCFRPPETDTPPEIQKFW 60

Query: 247 QWLSDEKVVTHKSPAKPGVVAEGLGLVAQRDISRNEVVLEIPKKFWINPDTVAASEIGNV 426
            WLSD+ +++ K P KPG+V EGLGLVAQ+DISRNEVVLE+P+KFWINPDTVAASEIG+V
Sbjct: 61  GWLSDKGIISPKCPVKPGIVPEGLGLVAQKDISRNEVVLEVPQKFWINPDTVAASEIGSV 120

Query: 427 CSGLKPWVCVALFLIREK 480
           C+GLKPWV VALFL+REK
Sbjct: 121 CNGLKPWVSVALFLMREK 138


>gb|AAC29137.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           N-methyltransferase I [Spinacia oleracea]
          Length = 491

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 10/138 (7%)
 Frame = +1

Query: 97  MSTLFYLNPSSS--------ILKHHHSHFKTPSK--RSSFYINSXXXXXXXXXXEVQTFW 246
           M+TLF L PSS+          +H   HF TPS   ++   I            E+Q FW
Sbjct: 1   MATLFTLIPSSNSTFLNPFKTTQHSKLHFATPSPTFKNPLSIRCFRPPETDTPPEIQKFW 60

Query: 247 QWLSDEKVVTHKSPAKPGVVAEGLGLVAQRDISRNEVVLEIPKKFWINPDTVAASEIGNV 426
            WLSD+ +++ K P KPG+V EGLGLVAQ+DISRNEVVLE+P+KFWINPDTVAASEIG+V
Sbjct: 61  GWLSDKGIISPKCPVKPGIVPEGLGLVAQKDISRNEVVLEVPQKFWINPDTVAASEIGSV 120

Query: 427 CSGLKPWVCVALFLIREK 480
           C+GLKPWV VALFL+REK
Sbjct: 121 CNGLKPWVSVALFLMREK 138


>ref|XP_002522479.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase, chloroplast precursor, putative
           [Ricinus communis] gi|223538364|gb|EEF39971.1|
           Ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplast precursor,
           putative [Ricinus communis]
          Length = 502

 Score =  151 bits (381), Expect = 6e-35
 Identities = 78/126 (61%), Positives = 91/126 (72%), Gaps = 2/126 (1%)
 Frame = +1

Query: 115 LNPSSSILKHHHSHFKTPSKRSSFYI--NSXXXXXXXXXXEVQTFWQWLSDEKVVTHKSP 288
           L P S + K    H K P     F+I  +S           ++ FWQWLSD+ VV+ KSP
Sbjct: 16  LKPFSPVTKIPSFHLKKP-----FFITSSSLQSSATAPPQSLEIFWQWLSDQGVVSGKSP 70

Query: 289 AKPGVVAEGLGLVAQRDISRNEVVLEIPKKFWINPDTVAASEIGNVCSGLKPWVCVALFL 468
           AKPGVV EGLGL+A+RDI+RNEVVLEIPKK WINPD VAAS+IGNVCSGLKPW+ VALFL
Sbjct: 71  AKPGVVKEGLGLIAERDIARNEVVLEIPKKLWINPDAVAASDIGNVCSGLKPWISVALFL 130

Query: 469 IREKLR 486
           IREKL+
Sbjct: 131 IREKLK 136


>ref|XP_002267249.1| PREDICTED: probable ribulose-1,5 bisphosphate carboxylase/oxygenase
           large subunit N-methyltransferase, chloroplastic [Vitis
           vinifera] gi|296087793|emb|CBI35049.3| unnamed protein
           product [Vitis vinifera]
          Length = 484

 Score =  151 bits (381), Expect = 6e-35
 Identities = 80/135 (59%), Positives = 94/135 (69%), Gaps = 5/135 (3%)
 Frame = +1

Query: 97  MSTLFYL-NPSSSILKHHHSHFKTP----SKRSSFYINSXXXXXXXXXXEVQTFWQWLSD 261
           M+TLF L + SSS+        K P    S+R  F +             VQTFW+WL D
Sbjct: 1   MATLFTLVSSSSSVFFFPIKTLKNPPIIHSRRPPFSLTCLRSLETNPPPPVQTFWKWLFD 60

Query: 262 EKVVTHKSPAKPGVVAEGLGLVAQRDISRNEVVLEIPKKFWINPDTVAASEIGNVCSGLK 441
           + VV+ K+P KPG+V EGLGLVAQRDI+RNE VLE+PK+FWINPD VAASEIG+VC GLK
Sbjct: 61  QGVVSGKTPVKPGIVPEGLGLVAQRDIARNEAVLEVPKRFWINPDAVAASEIGSVCGGLK 120

Query: 442 PWVCVALFLIREKLR 486
           PWV VALFLIREKLR
Sbjct: 121 PWVSVALFLIREKLR 135


Top