BLASTX nr result

ID: Cnidium21_contig00013686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013686
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314172.1| GRAS family transcription factor [Populus tr...   110   4e-22
gb|AFH54537.1| GRAS family protein, partial [Dimocarpus longan]       102   1e-19
ref|XP_002299867.1| GRAS family transcription factor [Populus tr...   101   2e-19
ref|XP_002283383.1| PREDICTED: scarecrow-like protein 14-like [V...   100   3e-19
gb|AAF79548.1|AC022464_6 F22G5.9 [Arabidopsis thaliana]                99   1e-18

>ref|XP_002314172.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222850580|gb|EEE88127.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 762

 Score =  110 bits (274), Expect = 4e-22
 Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 10/185 (5%)
 Frame = +3

Query: 87  FDDELVSPDSDQSQNVANGCKFKDEXXXXXXXXXXXXXXXXXXKNSKLPSGGLSLLDIPT 266
           F+DE+V P S+Q QNV NG K +D                            L  L+ P 
Sbjct: 16  FEDEIVFPVSNQYQNVTNGFKIEDLD--------------------------LDHLENPL 49

Query: 267 NSPDLDPRN-ATPSTGSSETNSSDDSLFSDGVLKFLNQILMEDKIEEKPCMFHDPLALQA 443
             PD DP N A  S  S + +S  D   S+ +LK+++Q+LME+ +EEKPCMFHDPLALQA
Sbjct: 50  VLPDPDPGNSALSSITSMDGDSPSDDNDSENLLKYISQMLMEENMEEKPCMFHDPLALQA 109

Query: 444 AEKSFYDVLG-KEYPASSHQ-PLVDINCCVESPNGNFIGC-------SNGSSGDGNYIDT 596
           AE+S YD+LG K  P+S H+ P       V+SP+ NF          S+ +S   + +D 
Sbjct: 110 AERSLYDILGDKNLPSSPHESPSYGDQFLVDSPDDNFWSSRSDYSSNSSSTSNTASLVDP 169

Query: 597 QWVGD 611
           QW G+
Sbjct: 170 QWNGE 174


>gb|AFH54537.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 288

 Score =  102 bits (253), Expect = 1e-19
 Identities = 70/198 (35%), Positives = 102/198 (51%), Gaps = 8/198 (4%)
 Frame = +3

Query: 42  DPGFSDLSDVLIGFGFDDELVSPDSDQSQNVANGCKFKDEXXXXXXXXXXXXXXXXXXKN 221
           DP F++ +  + GF  + + V P+S++  +VAN  KF D                     
Sbjct: 1   DPQFTEFNSSINGFNGERDTVFPNSNEYLDVANEFKFSD--------------------- 39

Query: 222 SKLPSGGLS-LLDIPTNSPDLDPRNATPSTGSSETNSSDDSLFSDGVLKFLNQILMEDKI 398
           S L +  +  LL  P        ++ + S     ++ SDD+ FS+ VL ++NQ+LME+ +
Sbjct: 40  SNLDTSFVDDLLVTPERDSGFSAQSFSLSPEGESSSPSDDNDFSETVLNYINQMLMEEDM 99

Query: 399 EEKPCMFHDPLALQAAEKSFYDVLGKEYPASSHQPLVDINCCVESPNGNFIGC------- 557
           EEKPCMFHDPLALQA E+S Y+VLG E  +SS   L   N   ESP+  F  C       
Sbjct: 100 EEKPCMFHDPLALQAKEQSLYEVLG-EKDSSSPDQLPFYN--TESPDDYFSSCFSDHGSN 156

Query: 558 SNGSSGDGNYIDTQWVGD 611
           S+ SSG  + ++  W GD
Sbjct: 157 SSSSSGTNHLVEPFWNGD 174


>ref|XP_002299867.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222847125|gb|EEE84672.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 757

 Score =  101 bits (251), Expect = 2e-19
 Identities = 63/156 (40%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
 Frame = +3

Query: 87  FDDELVSPDSDQSQNVANGCKFKDEXXXXXXXXXXXXXXXXXXKNSKLPSGGLSLLDIPT 266
           F+DE+V PDS+Q  NV+NG KF+D                               ++ P 
Sbjct: 16  FEDEIVFPDSNQYHNVSNGFKFEDLD--------------------------FDCVENPL 49

Query: 267 NSPDLDPRNATPSTGSSETNSSDDSLFSDGVLKFLNQILMEDKIEEKPCMFHDPLALQAA 446
             PD DP   +  T   E + SDD+  S+ +LK++NQ+LME+ +EEKPCMFHDPLALQAA
Sbjct: 50  VLPDPDPGALSSITAIDEDSPSDDN-DSENLLKYINQMLMEEDMEEKPCMFHDPLALQAA 108

Query: 447 EKSFYDVLG-KEYPASSH-QPLVDINCCVESPNGNF 548
           E+S YD+LG K  P+  H  P       V+SP+  F
Sbjct: 109 ERSLYDILGEKNQPSLPHDSPSYGDQFLVDSPDDVF 144


>ref|XP_002283383.1| PREDICTED: scarecrow-like protein 14-like [Vitis vinifera]
          Length = 764

 Score =  100 bits (249), Expect = 3e-19
 Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 27/201 (13%)
 Frame = +3

Query: 243 LSLLDIPTNSPDLDPRN-ATPSTGSSETNSSDDSLFSDGVLKFLNQILMEDKIEEKPCMF 419
           L+ LD P   PD++    A  S+ S + +SSDD   SD  LK+++Q+LME+ +E+K CMF
Sbjct: 35  LNFLDHPFLPPDVNLGVFAQSSSLSPDGDSSDDGDSSDSFLKYVSQVLMEENLEDKACMF 94

Query: 420 HDPLALQAAEKSFYDVLGKEYPASSHQPLVDINCCVESPNGNFIGCS----------NGS 569
           HDPLA+QAAEKSFYDVLG + P    +P V ++  V+SP+ +  G S          NG+
Sbjct: 95  HDPLAVQAAEKSFYDVLGGQNPTFRSEPPVHVDQVVDSPDDSVSGSSSDYGSYSSRINGT 154

Query: 570 SG------DGNYIDTQWVGDXXXXXXXXXXXXXXXXXNLQW----------SLSSVESFN 701
           S         N  + QWV D                 N  +          S++S +SF+
Sbjct: 155 SNLQWSADAHNSANHQWVVDPGDRNYKSSFLQNPLPENYVFGSALGSASPSSVTSSDSFS 214

Query: 702 NSVIGPTNLSASTNLIQNIFN 764
           N   G  + S  T L+ NIF+
Sbjct: 215 NIGNGVVDSSPKTVLVPNIFS 235


>gb|AAF79548.1|AC022464_6 F22G5.9 [Arabidopsis thaliana]
          Length = 1502

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 15/130 (11%)
 Frame = +3

Query: 234 SGGLSLLDIPTNSPDLDPRNATPSTGSSETN-------------SSDDSLFSDGVLKFLN 374
           + G  L D+  +S  LDP  A PS  ++  N             SSDD+ FSD VLK+++
Sbjct: 34  ANGFYLDDLDFSS--LDPPEAYPSQNNNNNNINNKAVAGDLLSSSSDDADFSDSVLKYIS 91

Query: 375 QILMEDKIEEKPCMFHDPLALQAAEKSFYDVLGKEYPASSHQPLVD--INCCVESPNGNF 548
           Q+LME+ +EEKPCMFHD LALQAAEKS Y+ LG++YP+SS    VD       +SP+G+ 
Sbjct: 92  QVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKYPSSSSASSVDHPERLASDSPDGS- 150

Query: 549 IGCSNGSSGD 578
             CS G+  D
Sbjct: 151 --CSGGAFSD 158


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