BLASTX nr result

ID: Cnidium21_contig00013627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013627
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550686.1| PREDICTED: eukaryotic translation initiation...    79   4e-14
gb|ACM79937.1| eIF5A3 [Populus deltoides]                              79   5e-14
ref|XP_004138702.1| PREDICTED: eukaryotic translation initiation...    80   1e-13
ref|XP_002315023.1| predicted protein [Populus trichocarpa] gi|1...    77   1e-13
ref|XP_002335795.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-13

>ref|XP_003550686.1| PREDICTED: eukaryotic translation initiation factor 5A-like
           [Glycine max]
          Length = 194

 Score = 79.0 bits (193), Expect(2) = 4e-14
 Identities = 45/78 (57%), Positives = 54/78 (69%)
 Frame = +3

Query: 273 VPVVTLTDYQLVDISEEDSHVVVLDDKAHKKCDLNLPTNQDLLSQIKRGLMEGKDVYVSV 452
           VP V  TDYQL+DISE D  V +L D  + K DL LPT++ LLSQIK G  EGKD+ VSV
Sbjct: 117 VPHVNRTDYQLIDISE-DGFVSLLTDNGNTKDDLKLPTDEALLSQIKDGFAEGKDLVVSV 175

Query: 453 TSAMGKEKIIASKIQDPK 506
            SAMG+E+I + K   PK
Sbjct: 176 MSAMGEEQICSLKDIGPK 193



 Score = 25.0 bits (53), Expect(2) = 4e-14
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = +1

Query: 88  IVEIRTATATKR-----LFIAIDIFNGK 156
           +VE+ T+   K       F+AIDIFNGK
Sbjct: 76  VVEVSTSKTGKHGHAKCHFVAIDIFNGK 103


>gb|ACM79937.1| eIF5A3 [Populus deltoides]
          Length = 159

 Score = 78.6 bits (192), Expect(2) = 5e-14
 Identities = 44/78 (56%), Positives = 55/78 (70%)
 Frame = +3

Query: 273 VPVVTLTDYQLVDISEEDSHVVVLDDKAHKKCDLNLPTNQDLLSQIKRGLMEGKDVYVSV 452
           VP VT TDYQL+DISE D  V +L +  + K DL LPT++ LLSQIK G  EGKD+ V+V
Sbjct: 83  VPHVTRTDYQLIDISE-DGFVSLLTENGNTKDDLRLPTDESLLSQIKDGFGEGKDLVVTV 141

Query: 453 TSAMGKEKIIASKIQDPK 506
            S+MG+E+I A K   PK
Sbjct: 142 MSSMGEEQICALKDVGPK 159



 Score = 25.0 bits (53), Expect(2) = 5e-14
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = +1

Query: 88  IVEIRTATATKR-----LFIAIDIFNGK 156
           +VE+ T+   K       F+AIDIFNGK
Sbjct: 42  VVEVSTSKTGKHGHAKCHFVAIDIFNGK 69


>ref|XP_004138702.1| PREDICTED: eukaryotic translation initiation factor 5A-2-like
           [Cucumis sativus] gi|449524174|ref|XP_004169098.1|
           PREDICTED: eukaryotic translation initiation factor
           5A-2-like [Cucumis sativus]
          Length = 160

 Score = 79.7 bits (195), Expect(2) = 1e-13
 Identities = 45/78 (57%), Positives = 53/78 (67%)
 Frame = +3

Query: 273 VPVVTLTDYQLVDISEEDSHVVVLDDKAHKKCDLNLPTNQDLLSQIKRGLMEGKDVYVSV 452
           VP VT TDYQL+DISE D  V +L D    K DL LPT++ LL+QIK G  EGKD+ VSV
Sbjct: 83  VPEVTRTDYQLIDISE-DGFVSLLTDNGSTKDDLRLPTDESLLTQIKDGFAEGKDLVVSV 141

Query: 453 TSAMGKEKIIASKIQDPK 506
            SAMG+E+I   K   PK
Sbjct: 142 MSAMGEEQICGLKDIGPK 159



 Score = 22.7 bits (47), Expect(2) = 1e-13
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
 Frame = +1

Query: 88  IVEIRTATATKR-----LFIAIDIFNGK 156
           +VE+ T+   K       F+AIDIF GK
Sbjct: 42  VVEVSTSKTGKHGHAKCHFVAIDIFTGK 69


>ref|XP_002315023.1| predicted protein [Populus trichocarpa] gi|118483571|gb|ABK93683.1|
           unknown [Populus trichocarpa]
           gi|118487769|gb|ABK95708.1| unknown [Populus
           trichocarpa] gi|222864063|gb|EEF01194.1| predicted
           protein [Populus trichocarpa]
          Length = 159

 Score = 77.4 bits (189), Expect(2) = 1e-13
 Identities = 43/78 (55%), Positives = 55/78 (70%)
 Frame = +3

Query: 273 VPVVTLTDYQLVDISEEDSHVVVLDDKAHKKCDLNLPTNQDLLSQIKRGLMEGKDVYVSV 452
           VP VT TDYQL+DISE D  V +L +  + K DL LPT++ LLSQIK G  +GKD+ V+V
Sbjct: 83  VPHVTRTDYQLIDISE-DGFVSLLTENGNTKDDLRLPTDESLLSQIKDGFGDGKDLVVTV 141

Query: 453 TSAMGKEKIIASKIQDPK 506
            S+MG+E+I A K   PK
Sbjct: 142 MSSMGEEQICALKDVGPK 159



 Score = 25.0 bits (53), Expect(2) = 1e-13
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = +1

Query: 88  IVEIRTATATKR-----LFIAIDIFNGK 156
           +VE+ T+   K       F+AIDIFNGK
Sbjct: 42  VVEVSTSKTGKHGHAKCHFVAIDIFNGK 69


>ref|XP_002335795.1| predicted protein [Populus trichocarpa] gi|222834827|gb|EEE73276.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score = 77.4 bits (189), Expect(2) = 1e-13
 Identities = 43/78 (55%), Positives = 55/78 (70%)
 Frame = +3

Query: 273 VPVVTLTDYQLVDISEEDSHVVVLDDKAHKKCDLNLPTNQDLLSQIKRGLMEGKDVYVSV 452
           VP VT TDYQL+DISE D  V +L +  + K DL LPT++ LLSQIK G  +GKD+ V+V
Sbjct: 45  VPHVTRTDYQLIDISE-DGFVSLLTENGNTKDDLRLPTDESLLSQIKDGFGDGKDLVVTV 103

Query: 453 TSAMGKEKIIASKIQDPK 506
            S+MG+E+I A K   PK
Sbjct: 104 MSSMGEEQICALKDVGPK 121



 Score = 25.0 bits (53), Expect(2) = 1e-13
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = +1

Query: 88  IVEIRTATATKR-----LFIAIDIFNGK 156
           +VE+ T+   K       F+AIDIFNGK
Sbjct: 4   VVEVSTSKTGKHGHAKCHFVAIDIFNGK 31


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