BLASTX nr result

ID: Cnidium21_contig00013626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013626
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM79937.1| eIF5A3 [Populus deltoides]                             128   1e-27
emb|CAB96075.1| translation initiation factor, eIF-5A [Oryza sat...   127   2e-27
sp|Q945F4.1|IF5A2_MEDSA RecName: Full=Eukaryotic translation ini...   127   3e-27
ref|XP_002315023.1| predicted protein [Populus trichocarpa] gi|1...   127   3e-27
gb|ABK22126.1| unknown [Picea sitchensis] gi|116792039|gb|ABK262...   127   3e-27

>gb|ACM79937.1| eIF5A3 [Populus deltoides]
          Length = 159

 Score =  128 bits (322), Expect = 1e-27
 Identities = 69/144 (47%), Positives = 95/144 (65%), Gaps = 4/144 (2%)
 Frame = -3

Query: 731 TKTVVQKVRDLTVTSFVRVEDSPCKIVEIRTPVDA----AKRQFIAVDVFNGKVFKATFP 564
           +KT  Q+   +  + ++ +++ PCK+VE+ T        AK  F+A+D+FNGK  +   P
Sbjct: 17  SKTYPQQAGTIRKSGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVP 76

Query: 563 LSGNCVVPIVTLTDYQLVDISEEDSFVAVLDDKGRKKCDLKLPSDQDLLSQIKLGLAEGK 384
            S NC VP VT TDYQL+DISE D FV++L + G  K DL+LP+D+ LLSQIK G  EGK
Sbjct: 77  SSHNCDVPHVTRTDYQLIDISE-DGFVSLLTENGNTKDDLRLPTDESLLSQIKDGFGEGK 135

Query: 383 DVFVCVVSAMGKEQIFASKIKNPK 312
           D+ V V+S+MG+EQI A K   PK
Sbjct: 136 DLVVTVMSSMGEEQICALKDVGPK 159


>emb|CAB96075.1| translation initiation factor, eIF-5A [Oryza sativa]
           gi|20429034|emb|CAC84392.1| translation initiation
           factor, eIF-5A [Oryza sativa]
          Length = 161

 Score =  127 bits (320), Expect = 2e-27
 Identities = 71/144 (49%), Positives = 94/144 (65%), Gaps = 4/144 (2%)
 Frame = -3

Query: 731 TKTVVQKVRDLTVTSFVRVEDSPCKIVEIRTPVDA----AKRQFIAVDVFNGKVFKATFP 564
           +KT  Q+   +  T  + +++ PCK+VE+ T        AK  F+A+D+FNGK  +   P
Sbjct: 18  SKTYPQQAGTIRKTGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVP 77

Query: 563 LSGNCVVPIVTLTDYQLVDISEEDSFVAVLDDKGRKKCDLKLPSDQDLLSQIKLGLAEGK 384
            S NC VP V  TDYQL+DISE D FV++L + G  K DL+LPSD+ LL+QIK G AEGK
Sbjct: 78  SSHNCDVPHVNRTDYQLIDISE-DGFVSLLTESGGTKDDLRLPSDEALLTQIKDGFAEGK 136

Query: 383 DVFVCVVSAMGKEQIFASKIKNPK 312
           D+ V V+SAMG+EQI A K   PK
Sbjct: 137 DLIVTVMSAMGEEQICALKDIGPK 160


>sp|Q945F4.1|IF5A2_MEDSA RecName: Full=Eukaryotic translation initiation factor 5A-2;
           Short=eIF-5A-2 gi|15866587|gb|AAL10404.1|AF416338_1
           eukaryotic translation initiation factor 5A-2 [Medicago
           sativa] gi|217071176|gb|ACJ83948.1| unknown [Medicago
           truncatula] gi|217075664|gb|ACJ86192.1| unknown
           [Medicago truncatula] gi|388494366|gb|AFK35249.1|
           unknown [Medicago truncatula]
          Length = 159

 Score =  127 bits (319), Expect = 3e-27
 Identities = 70/144 (48%), Positives = 92/144 (63%), Gaps = 4/144 (2%)
 Frame = -3

Query: 731 TKTVVQKVRDLTVTSFVRVEDSPCKIVEIRTPVDA----AKRQFIAVDVFNGKVFKATFP 564
           +KT  Q+   +    ++ ++  PCK+VE+ T        AK  F+A+D+FNGK  +   P
Sbjct: 17  SKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVP 76

Query: 563 LSGNCVVPIVTLTDYQLVDISEEDSFVAVLDDKGRKKCDLKLPSDQDLLSQIKLGLAEGK 384
            S NC VP V  TDYQL+DISE D FV++L D G  K DLKLP+D  LL+QIK G A+GK
Sbjct: 77  SSHNCDVPHVNRTDYQLIDISE-DGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGK 135

Query: 383 DVFVCVVSAMGKEQIFASKIKNPK 312
           D+ V V+SAMG+EQI A K   PK
Sbjct: 136 DLVVSVMSAMGEEQICALKDIGPK 159


>ref|XP_002315023.1| predicted protein [Populus trichocarpa] gi|118483571|gb|ABK93683.1|
           unknown [Populus trichocarpa]
           gi|118487769|gb|ABK95708.1| unknown [Populus
           trichocarpa] gi|222864063|gb|EEF01194.1| predicted
           protein [Populus trichocarpa]
          Length = 159

 Score =  127 bits (319), Expect = 3e-27
 Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 4/144 (2%)
 Frame = -3

Query: 731 TKTVVQKVRDLTVTSFVRVEDSPCKIVEIRTPVDA----AKRQFIAVDVFNGKVFKATFP 564
           +KT  Q+   +  + ++ +++ PCK+VE+ T        AK  F+A+D+FNGK  +   P
Sbjct: 17  SKTYPQQAGTIRKSGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVP 76

Query: 563 LSGNCVVPIVTLTDYQLVDISEEDSFVAVLDDKGRKKCDLKLPSDQDLLSQIKLGLAEGK 384
            S NC VP VT TDYQL+DISE D FV++L + G  K DL+LP+D+ LLSQIK G  +GK
Sbjct: 77  SSHNCDVPHVTRTDYQLIDISE-DGFVSLLTENGNTKDDLRLPTDESLLSQIKDGFGDGK 135

Query: 383 DVFVCVVSAMGKEQIFASKIKNPK 312
           D+ V V+S+MG+EQI A K   PK
Sbjct: 136 DLVVTVMSSMGEEQICALKDVGPK 159


>gb|ABK22126.1| unknown [Picea sitchensis] gi|116792039|gb|ABK26207.1| unknown
           [Picea sitchensis] gi|116792374|gb|ABK26338.1| unknown
           [Picea sitchensis] gi|148908259|gb|ABR17244.1| unknown
           [Picea sitchensis] gi|224284806|gb|ACN40133.1| unknown
           [Picea sitchensis] gi|224285675|gb|ACN40553.1| unknown
           [Picea sitchensis]
          Length = 159

 Score =  127 bits (319), Expect = 3e-27
 Identities = 70/144 (48%), Positives = 93/144 (64%), Gaps = 4/144 (2%)
 Frame = -3

Query: 731 TKTVVQKVRDLTVTSFVRVEDSPCKIVEIRTPVDA----AKRQFIAVDVFNGKVFKATFP 564
           +KT  Q+   +    ++ ++  PCK+VE+ T        AK  F+A+D+FNGK  +   P
Sbjct: 17  SKTFPQQAGTIRKNGYIVIKARPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVP 76

Query: 563 LSGNCVVPIVTLTDYQLVDISEEDSFVAVLDDKGRKKCDLKLPSDQDLLSQIKLGLAEGK 384
            S NC VP VT TD+QL+DISE D FV++L D G  K DL+LPSD+ LL+QIK G  EGK
Sbjct: 77  SSHNCDVPHVTRTDFQLIDISE-DGFVSLLADNGNTKDDLRLPSDEQLLTQIKDGFGEGK 135

Query: 383 DVFVCVVSAMGKEQIFASKIKNPK 312
           D+ V V+SAMG+EQI A K   PK
Sbjct: 136 DLVVTVMSAMGEEQICALKDIGPK 159


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