BLASTX nr result

ID: Cnidium21_contig00013583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013583
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]             130   8e-33
dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]             130   8e-33
ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...   127   4e-32
emb|CBI21127.3| unnamed protein product [Vitis vinifera]              127   4e-32
ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...   127   8e-32

>dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
          Length = 582

 Score =  130 bits (328), Expect(2) = 8e-33
 Identities = 60/76 (78%), Positives = 68/76 (89%)
 Frame = -1

Query: 229 RYLRVLGYEVNYVRNFTDVDDKIISRANQLGEDPIGLSRRFCEEFHQDMEDLHCLPPCVE 50
           RYL+ LGY+V YVRNFTDVDDKII+RAN++GE+PI LSRRFC+EFHQDM  LHCLPP VE
Sbjct: 134 RYLKYLGYDVCYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVE 193

Query: 49  PRVSDHISHIIDMIKQ 2
           PRVSDH+  IIDMIKQ
Sbjct: 194 PRVSDHMPQIIDMIKQ 209



 Score = 34.7 bits (78), Expect(2) = 8e-33
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -3

Query: 284 FSHIGHARVYVSVDVLFRQI 225
           FSHIGHAR YV+ D+L+R +
Sbjct: 117 FSHIGHARAYVTFDILYRYL 136


>dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
          Length = 582

 Score =  130 bits (328), Expect(2) = 8e-33
 Identities = 60/76 (78%), Positives = 68/76 (89%)
 Frame = -1

Query: 229 RYLRVLGYEVNYVRNFTDVDDKIISRANQLGEDPIGLSRRFCEEFHQDMEDLHCLPPCVE 50
           RYL+ LGY+V YVRNFTDVDDKII+RAN++GE+PI LSRRFC+EFHQDM  LHCLPP VE
Sbjct: 134 RYLKYLGYDVCYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVE 193

Query: 49  PRVSDHISHIIDMIKQ 2
           PRVSDH+  IIDMIKQ
Sbjct: 194 PRVSDHMPQIIDMIKQ 209



 Score = 34.7 bits (78), Expect(2) = 8e-33
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -3

Query: 284 FSHIGHARVYVSVDVLFRQI 225
           FSHIGHAR YV+ D+L+R +
Sbjct: 117 FSHIGHARAYVTFDILYRYL 136


>ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
          Length = 571

 Score =  127 bits (320), Expect(2) = 4e-32
 Identities = 60/76 (78%), Positives = 66/76 (86%)
 Frame = -1

Query: 229 RYLRVLGYEVNYVRNFTDVDDKIISRANQLGEDPIGLSRRFCEEFHQDMEDLHCLPPCVE 50
           RYLR L YEVNYVRNFTDVDDKII+RAN++GEDPI LSRR+C+EFH DM  LHCLPP VE
Sbjct: 125 RYLRHLEYEVNYVRNFTDVDDKIIARANEMGEDPINLSRRYCQEFHVDMTYLHCLPPSVE 184

Query: 49  PRVSDHISHIIDMIKQ 2
           P VSDH+  IIDMIKQ
Sbjct: 185 PCVSDHMPQIIDMIKQ 200



 Score = 35.4 bits (80), Expect(2) = 4e-32
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -3

Query: 281 SHIGHARVYVSVDVLFRQI 225
           SHIGHARVYVS DVL+R +
Sbjct: 109 SHIGHARVYVSFDVLYRYL 127


>emb|CBI21127.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  127 bits (320), Expect(2) = 4e-32
 Identities = 60/76 (78%), Positives = 66/76 (86%)
 Frame = -1

Query: 229 RYLRVLGYEVNYVRNFTDVDDKIISRANQLGEDPIGLSRRFCEEFHQDMEDLHCLPPCVE 50
           RYLR L YEVNYVRNFTDVDDKII+RAN++GEDPI LSRR+C+EFH DM  LHCLPP VE
Sbjct: 28  RYLRHLEYEVNYVRNFTDVDDKIIARANEMGEDPINLSRRYCQEFHVDMTYLHCLPPSVE 87

Query: 49  PRVSDHISHIIDMIKQ 2
           P VSDH+  IIDMIKQ
Sbjct: 88  PCVSDHMPQIIDMIKQ 103



 Score = 35.4 bits (80), Expect(2) = 4e-32
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -3

Query: 281 SHIGHARVYVSVDVLFRQI 225
           SHIGHARVYVS DVL+R +
Sbjct: 12  SHIGHARVYVSFDVLYRYL 30


>ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 576

 Score =  127 bits (320), Expect(2) = 8e-32
 Identities = 60/76 (78%), Positives = 67/76 (88%)
 Frame = -1

Query: 229 RYLRVLGYEVNYVRNFTDVDDKIISRANQLGEDPIGLSRRFCEEFHQDMEDLHCLPPCVE 50
           RYLR LGYEV YVRNFTDVDDKII+RAN+LGEDP+ LSRR+CEEF +DM  LHCLPP VE
Sbjct: 128 RYLRHLGYEVLYVRNFTDVDDKIIARANELGEDPLNLSRRYCEEFRRDMMYLHCLPPSVE 187

Query: 49  PRVSDHISHIIDMIKQ 2
           P+VSDH+  IIDMIKQ
Sbjct: 188 PQVSDHMPQIIDMIKQ 203



 Score = 34.3 bits (77), Expect(2) = 8e-32
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -3

Query: 281 SHIGHARVYVSVDVLFRQI 225
           SHIGHARVYV+ DVL+R +
Sbjct: 112 SHIGHARVYVTFDVLYRYL 130


Top