BLASTX nr result

ID: Cnidium21_contig00013544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013544
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303427.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06
ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266...    58   2e-06

>ref|XP_002303427.1| predicted protein [Populus trichocarpa] gi|222840859|gb|EEE78406.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
 Frame = -2

Query: 723 SATKFVANSRTPDSKAK-----TMSYQGLRASKSGVQKKAHTKKFEPLKFNSMSVKVQKP 559
           S  K   +SRTPD   +       SYQGLRASKSG++KK H       +  +  VK +  
Sbjct: 379 SNKKLATDSRTPDRNNRPDTKAAKSYQGLRASKSGIEKKVHAPA-NAKRNGTAKVKSKTQ 437

Query: 558 KE-RTEXXXXXXXXXXXXXXXXSNGAKEAGGKKRKVENRTPSSSQKSKKARRF 403
           +E R E                  GA     +KRK+++RTP SS + KKAR+F
Sbjct: 438 REKRQEKRPAVALRKAKATALKDGGASGPARQKRKLDSRTPDSSNRKKKARKF 490


>ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|222833855|gb|EEE72332.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
 Frame = -2

Query: 702 NSRTPDSKAKTMSYQGLRASKSGVQKK----AHTKKFEPLKFNSMSVKVQKPKERTEXXX 535
           ++  PD KA   SYQGLRASKSGV+KK    AH+K+    K  S      KP+E      
Sbjct: 388 HNNRPDRKA-AKSYQGLRASKSGVEKKVHAPAHSKRDVAPKMKS------KPREEKHQGK 440

Query: 534 XXXXXXXXXXXXXSN--GAKEAGGKKRKVENRTPSSSQKSKKARRF 403
                            GA E   +KRK+++RTP SS + KKAR+F
Sbjct: 441 RPAVAKRKAKATALKDGGALEPARQKRKLDSRTPDSSNRKKKARKF 486


>ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266124 [Vitis vinifera]
          Length = 541

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
 Frame = -2

Query: 669 MSYQGLRASKSGVQKKAHTKKFEPLKFNSMSVK----VQKPKERTEXXXXXXXXXXXXXX 502
           +SYQGL+ASKSGV KK   +  E +KF S + K     ++ K+R                
Sbjct: 449 ISYQGLQASKSGVPKKGRLQTKEAVKFKSKNQKENTLKEQQKKRPAVAARKAKINAVNAA 508

Query: 501 XXSNGAKEAGGKKRKVENRTPSSSQKSKKARRF 403
               G+K+  GKKRK+E++TP   ++SKKA++F
Sbjct: 509 GGGGGSKQT-GKKRKLESQTPEGGRRSKKAKKF 540


Top