BLASTX nr result

ID: Cnidium21_contig00013522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013522
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    80   9e-13
emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]    80   9e-13
ref|XP_002514028.1| conserved hypothetical protein [Ricinus comm...    61   3e-07
ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    57   6e-06
ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    57   8e-06

>ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
            vinifera]
          Length = 1213

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 42/103 (40%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
 Frame = +1

Query: 472  DHYATRYNKGSHYSADHAEYAEDGH-VWAKQPSKCSSAENMRGKGSVPILYSDKSKHCRK 648
            + Y++   + SH   D A+   +G   WA+ P+  S   +M GKG +P L SD +K CRK
Sbjct: 1111 NRYSSCSTETSHSQTDKAKLVMEGDGFWARPPNGSSKLVDMEGKGDIPFLLSDIAKPCRK 1170

Query: 649  LDSNSNCSS-CRETYLDKLGKLNPLNSVKSGMSLRKSSRGKLD 774
            L SNS+  S C+ET  +K+G++NPL+S+K G+  R+S+R + D
Sbjct: 1171 LVSNSSSDSYCKETDKEKVGRVNPLDSMKLGVPSRRSTRERTD 1213


>emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
          Length = 1225

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 42/103 (40%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
 Frame = +1

Query: 472  DHYATRYNKGSHYSADHAEYAEDGH-VWAKQPSKCSSAENMRGKGSVPILYSDKSKHCRK 648
            + Y++   + SH   D A+   +G   WA+ P+  S   +M GKG +P L SD +K CRK
Sbjct: 1123 NRYSSCSTETSHSQTDKAKLVMEGDGFWARPPNGSSKLVDMEGKGDIPFLLSDIAKPCRK 1182

Query: 649  LDSNSNCSS-CRETYLDKLGKLNPLNSVKSGMSLRKSSRGKLD 774
            L SNS+  S C+ET  +K+G++NPL+S+K G+  R+S+R + D
Sbjct: 1183 LVSNSSSDSYCKETDKEKVGRVNPLDSMKLGVPSRRSTRERTD 1225


>ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
           gi|223547114|gb|EEF48611.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1060

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/54 (61%), Positives = 37/54 (68%), Gaps = 8/54 (14%)
 Frame = +1

Query: 1   VLTKGAYMLLYARCSPRAPKLIRNSMVPHDPR--------KPKNISLLSRSHST 138
           VLTKGAYMLLYARCSPRAP+LIRN +   DP+          KN +L SRS ST
Sbjct: 815 VLTKGAYMLLYARCSPRAPRLIRNRIASSDPKMKGSASRVSAKNTALNSRSSST 868


>ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
           max]
          Length = 1036

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
 Frame = +1

Query: 1   VLTKGAYMLLYARCSPRAPKLIRNSMVPHDPR---KPKNISLLSRSHSTGA 144
           VL KGAYML Y+RCSPRAP+LIRNS+V  D +     K  ++ SR  STGA
Sbjct: 797 VLAKGAYMLFYSRCSPRAPRLIRNSIVSSDSKWKLNGKTATMKSRRLSTGA 847


>ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
            max]
          Length = 1063

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1    VLTKGAYMLLYARCSPRAPKLIRNSMVPHDPRKP---KNISLLSRSHSTGACDSPRTDHL 171
            VLTKGAYML YARCSPRAP+LIRN ++  D ++    K ++  +RS ST   +S   +H+
Sbjct: 895  VLTKGAYMLFYARCSPRAPRLIRNRILSPDSKRKVSGKTLTTKARSIST---NSGVAEHV 951

Query: 172  NHQTS 186
            N   S
Sbjct: 952  NSSIS 956


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