BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013452
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41303.1| unknown [Medicago truncatula]                          119   3e-25
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ...   119   3e-25
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...   115   3e-24
ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...   114   6e-24

>gb|AFK41303.1| unknown [Medicago truncatula]
          Length = 206

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = -2

Query: 248 MTMTEEEMSRLYRIRRTVMQMLDDRGYLVAEAEKEMSKNQFLQKYGENAKREDLVMCKSK 69
           M  +EEE++RLYRIR+TVMQML DR YLV + E  MSK+ F  KYGEN KREDLV+ K+K
Sbjct: 1   MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTK 60

Query: 68  KNNPSDQIYVFYPEEAKVGVKT 3
           K+ PSDQIYVF+PEEAKVGVKT
Sbjct: 61  KDKPSDQIYVFFPEEAKVGVKT 82


>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|355511987|gb|AES93610.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 [Medicago truncatula]
          Length = 410

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = -2

Query: 248 MTMTEEEMSRLYRIRRTVMQMLDDRGYLVAEAEKEMSKNQFLQKYGENAKREDLVMCKSK 69
           M  +EEE++RLYRIR+TVMQML DR YLV + E  MSK+ F  KYGEN KREDLV+ K+K
Sbjct: 205 MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTK 264

Query: 68  KNNPSDQIYVFYPEEAKVGVKT 3
           K+ PSDQIYVF+PEEAKVGVKT
Sbjct: 265 KDKPSDQIYVFFPEEAKVGVKT 286


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/82 (68%), Positives = 68/82 (82%)
 Frame = -2

Query: 248 MTMTEEEMSRLYRIRRTVMQMLDDRGYLVAEAEKEMSKNQFLQKYGENAKREDLVMCKSK 69
           M ++EEEM RLYRIR+TVMQML DRG+LV + E  MSK++F  KYGE+ KREDLV+ KSK
Sbjct: 1   MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 68  KNNPSDQIYVFYPEEAKVGVKT 3
           K+N  DQIYVF+P+E KVGVKT
Sbjct: 61  KDNSGDQIYVFFPDEPKVGVKT 82


>ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|222873254|gb|EEF10385.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/82 (68%), Positives = 68/82 (82%)
 Frame = -2

Query: 248 MTMTEEEMSRLYRIRRTVMQMLDDRGYLVAEAEKEMSKNQFLQKYGENAKREDLVMCKSK 69
           MT+TEEE+ RL RIR+TVMQML DRGY V + E +M++ QF  KYG N KREDLV+ K+K
Sbjct: 1   MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60

Query: 68  KNNPSDQIYVFYPEEAKVGVKT 3
           +N+ SDQIYVF+PEEAKVGVKT
Sbjct: 61  RNDSSDQIYVFFPEEAKVGVKT 82


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/81 (65%), Positives = 69/81 (85%)
 Frame = -2

Query: 248 MTMTEEEMSRLYRIRRTVMQMLDDRGYLVAEAEKEMSKNQFLQKYGENAKREDLVMCKSK 69
           M ++EEE++RL+RIR+TV QML DRGY V + E +M++ QF QKYGEN KRED+V+ KSK
Sbjct: 1   MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60

Query: 68  KNNPSDQIYVFYPEEAKVGVK 6
           +N+ SDQIYVF+PEEAKVG+K
Sbjct: 61  RNDSSDQIYVFFPEEAKVGIK 81