BLASTX nr result

ID: Cnidium21_contig00013451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013451
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277288.1| PREDICTED: WD repeat-containing protein 74 [...   384   e-104
ref|XP_002321685.1| predicted protein [Populus trichocarpa] gi|2...   368   1e-99
gb|ADN33953.1| WD-repeat protein [Cucumis melo subsp. melo]           365   1e-98
ref|XP_002318118.1| predicted protein [Populus trichocarpa] gi|2...   365   2e-98
ref|XP_002511220.1| WD-repeat protein, putative [Ricinus communi...   359   9e-97

>ref|XP_002277288.1| PREDICTED: WD repeat-containing protein 74 [Vitis vinifera]
           gi|297742065|emb|CBI33852.3| unnamed protein product
           [Vitis vinifera]
          Length = 421

 Score =  384 bits (985), Expect = e-104
 Identities = 193/287 (67%), Positives = 223/287 (77%), Gaps = 2/287 (0%)
 Frame = +3

Query: 3   IELISPVNGDLRLSLSNGSQVDGEPEDDPVSGLHLFKRKKLQXXXXXXXXXXXXKKGRVV 182
           IE+++P+NG   LS+SN      EP DD + GLHLFK++ L              KG   
Sbjct: 77  IEILNPLNGHPCLSISNIIDNGPEPGDDAIVGLHLFKKQNLDLSSRSHTLLTCTTKGNAS 136

Query: 183 LRSVELPSG--DVTSNGTPLTWTVCGSGDVLCSKVDENENYALFGGKRVEVNVWDLEKRT 356
           +RSVEL S   D TS+ +  TW VC SG++LCS+VD NENYALFGGK VEVNVWDLE+ T
Sbjct: 137 MRSVELTSSHADSTSSVSSRTWNVCASGNILCSQVDGNENYALFGGKGVEVNVWDLEQGT 196

Query: 357 KIWTAKSPPKNSLDIFTPTWFTSATFLNKDDHRKLVTGTNHHQVRLYDITAQRRPVISFD 536
           KIWTAKSPPKNSL +FTPTWFTSATFL+KDDHRK V GTN HQVRLYDI+AQRRPVISFD
Sbjct: 197 KIWTAKSPPKNSLGLFTPTWFTSATFLSKDDHRKFVAGTNSHQVRLYDISAQRRPVISFD 256

Query: 537 FLEAPITAVTEDLDGRKVYVGNGSGDLASFDIRTGKLLGRFSGKCSGSIKSIARHPELPV 716
           F E PI AV ED DG  +Y+GNGSGDLAS D+RTGKLLG F GKCSGSI+SIARHPELPV
Sbjct: 257 FRETPIKAVAEDQDGYTIYIGNGSGDLASVDMRTGKLLGCFLGKCSGSIRSIARHPELPV 316

Query: 717 LASCGLDRYLRFWDTESRQLLSAVFLKQHLTSVVLDSQFNDEEVVAS 857
           +ASCGLD YLRFWD ++R++LSAVFLKQ LT+VV DS F +EEV +S
Sbjct: 317 IASCGLDSYLRFWDIKTRKVLSAVFLKQPLTNVVFDSNFAEEEVPSS 363


>ref|XP_002321685.1| predicted protein [Populus trichocarpa] gi|222868681|gb|EEF05812.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  368 bits (945), Expect = 1e-99
 Identities = 181/282 (64%), Positives = 215/282 (76%), Gaps = 2/282 (0%)
 Frame = +3

Query: 3   IELISPVNGDLRLSLSNGSQVDGEPEDDPVSGLHLFKRKKLQXXXXXXXXXXXXKKGRVV 182
           +E+++P+NG++R+  SN  +   +PEDD ++GLHLFKR++               KG   
Sbjct: 76  VEVLNPLNGEIRVVFSNVVEDGVQPEDDAIAGLHLFKRER---STGSCALLTCTTKGNAS 132

Query: 183 LRS--VELPSGDVTSNGTPLTWTVCGSGDVLCSKVDENENYALFGGKRVEVNVWDLEKRT 356
           +RS  V+    DV +     TW VCGSG+VLCSKVD +ENYA+FGGK VEVN+WDLE  T
Sbjct: 133 MRSIGVDKSMADVANTSVTKTWKVCGSGNVLCSKVDGSENYAVFGGKGVEVNLWDLESST 192

Query: 357 KIWTAKSPPKNSLDIFTPTWFTSATFLNKDDHRKLVTGTNHHQVRLYDITAQRRPVISFD 536
           KIWTAK PPKNSL IFTPTWFT  TFL+ DDHRK   GTN HQVRLYDI+AQRRPV+SFD
Sbjct: 193 KIWTAKPPPKNSLGIFTPTWFTCTTFLSNDDHRKFAAGTNIHQVRLYDISAQRRPVLSFD 252

Query: 537 FLEAPITAVTEDLDGRKVYVGNGSGDLASFDIRTGKLLGRFSGKCSGSIKSIARHPELPV 716
           F E  I AVTED DG  +Y+GNGSGDLASFD+RTGKLLG F GKCSGSI+S+ARHPELPV
Sbjct: 253 FRETAIKAVTEDQDGHTIYIGNGSGDLASFDMRTGKLLGCFIGKCSGSIRSMARHPELPV 312

Query: 717 LASCGLDRYLRFWDTESRQLLSAVFLKQHLTSVVLDSQFNDE 842
           +ASCGLD YLR WD ++RQLLSAVFLKQHLT+VV DS F D+
Sbjct: 313 IASCGLDSYLRLWDIKTRQLLSAVFLKQHLTNVVFDSNFVDK 354


>gb|ADN33953.1| WD-repeat protein [Cucumis melo subsp. melo]
          Length = 422

 Score =  365 bits (937), Expect = 1e-98
 Identities = 176/284 (61%), Positives = 216/284 (76%), Gaps = 2/284 (0%)
 Frame = +3

Query: 3   IELISPVNGDLRLSLSNGSQVDGEPEDDPVSGLHLFKRKKLQXXXXXXXXXXXXKKGRVV 182
           IE+++P+NG+L +++S+ +     P+D+ + G+HLF + +L+             KG   
Sbjct: 77  IEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEVESRRCTLLSCTTKGNAS 136

Query: 183 LRSVELPSGDVTSNGTPL--TWTVCGSGDVLCSKVDENENYALFGGKRVEVNVWDLEKRT 356
           +RS+E  S       T L  TW VCGSGDV+CSKVD +E +ALFGGK VEVN+W+LE+ T
Sbjct: 137 MRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHALFGGKGVEVNMWNLEQCT 196

Query: 357 KIWTAKSPPKNSLDIFTPTWFTSATFLNKDDHRKLVTGTNHHQVRLYDITAQRRPVISFD 536
           KIWTAK+P KN+L IFTPTWFTSATFL+KDDHRK   GTN HQVRLYDI+AQ+RPVISFD
Sbjct: 197 KIWTAKAPKKNNLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISFD 256

Query: 537 FLEAPITAVTEDLDGRKVYVGNGSGDLASFDIRTGKLLGRFSGKCSGSIKSIARHPELPV 716
           F E PI ++ ED+DG  ++VGN SGDLASFDIR GKLLG F GKCSGSI+SIARHPELPV
Sbjct: 257 FRETPIKSLAEDVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPELPV 316

Query: 717 LASCGLDRYLRFWDTESRQLLSAVFLKQHLTSVVLDSQFNDEEV 848
           +ASCGLD Y+RFWD  +RQLLSAVFLKQHLT VV DS F  E+V
Sbjct: 317 IASCGLDSYVRFWDINTRQLLSAVFLKQHLTGVVFDSHFVGEDV 360


>ref|XP_002318118.1| predicted protein [Populus trichocarpa] gi|222858791|gb|EEE96338.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  365 bits (936), Expect = 2e-98
 Identities = 179/282 (63%), Positives = 213/282 (75%), Gaps = 2/282 (0%)
 Frame = +3

Query: 3   IELISPVNGDLRLSLSNGSQVDGEPEDDPVSGLHLFKRKKLQXXXXXXXXXXXXKKGRVV 182
           +E+++P+NG++ +  SN  +   +PEDD +SGLHLF+R++               KG   
Sbjct: 66  VEVVNPLNGEIHVVFSNVGEDGVQPEDDAISGLHLFRRERSSGSCTLLTCT---SKGNAS 122

Query: 183 LRSVELP--SGDVTSNGTPLTWTVCGSGDVLCSKVDENENYALFGGKRVEVNVWDLEKRT 356
           +RS+ +   + D  S     TW VCGSG+VLCSKVD +ENYA+FGGK VEVN+WDLE  T
Sbjct: 123 VRSIGVDKLTADSASISVTKTWKVCGSGNVLCSKVDGSENYAVFGGKGVEVNLWDLENST 182

Query: 357 KIWTAKSPPKNSLDIFTPTWFTSATFLNKDDHRKLVTGTNHHQVRLYDITAQRRPVISFD 536
           KIWTAK PPKNSL IFTPTWFT  TFL+ DDH K V GTN HQV LYDI+AQRRPV+SFD
Sbjct: 183 KIWTAKPPPKNSLGIFTPTWFTCTTFLSNDDHHKFVAGTNSHQVHLYDISAQRRPVLSFD 242

Query: 537 FLEAPITAVTEDLDGRKVYVGNGSGDLASFDIRTGKLLGRFSGKCSGSIKSIARHPELPV 716
           F E  I AVTED DG  +Y+GNGSGDLASFD+RTGKLLG F GKCSGSI+SIARHPELPV
Sbjct: 243 FRETAIKAVTEDQDGHTIYIGNGSGDLASFDMRTGKLLGCFIGKCSGSIRSIARHPELPV 302

Query: 717 LASCGLDRYLRFWDTESRQLLSAVFLKQHLTSVVLDSQFNDE 842
           +ASCGLD YLR WD ++RQLLSAVFLKQHLT+VV DS F D+
Sbjct: 303 IASCGLDSYLRLWDIKTRQLLSAVFLKQHLTNVVFDSNFVDK 344


>ref|XP_002511220.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550335|gb|EEF51822.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 406

 Score =  359 bits (921), Expect = 9e-97
 Identities = 179/285 (62%), Positives = 216/285 (75%), Gaps = 3/285 (1%)
 Frame = +3

Query: 3   IELISPVNGDLRLSLSNGSQVDG-EPEDDPVSGLHLFKRKKLQXXXXXXXXXXXXKKGRV 179
           IE+++ +NG ++ S+SN    D  +P+DD V+GLHLF+R++L              KG  
Sbjct: 76  IEVMNTLNGQIQASISNVGDADAVKPQDDAVAGLHLFRRQRLSGSCNLLTCTM---KGNA 132

Query: 180 VLRSVEL--PSGDVTSNGTPLTWTVCGSGDVLCSKVDENENYALFGGKRVEVNVWDLEKR 353
            +R +E    S D  S+     W VC SG++ CSKVD +ENYALFGGK VE+N+WDLEK 
Sbjct: 133 SIRPLEFNGSSADNASSDGLRNWKVCASGNIFCSKVDGSENYALFGGKSVELNLWDLEKC 192

Query: 354 TKIWTAKSPPKNSLDIFTPTWFTSATFLNKDDHRKLVTGTNHHQVRLYDITAQRRPVISF 533
           ++IW AKSPPKNSL IFTPTWFTSATFL+ DDHRK   GT++HQVRLYD +A RRPVISF
Sbjct: 193 SRIWNAKSPPKNSLGIFTPTWFTSATFLSNDDHRKFAAGTSNHQVRLYDTSALRRPVISF 252

Query: 534 DFLEAPITAVTEDLDGRKVYVGNGSGDLASFDIRTGKLLGRFSGKCSGSIKSIARHPELP 713
           DF EAPI AVTED DG  +Y+GNGSGDLAS DIRTGKLLG F GKCSGSI+SIARHPELP
Sbjct: 253 DFREAPIKAVTEDQDGYTIYIGNGSGDLASVDIRTGKLLGCFLGKCSGSIRSIARHPELP 312

Query: 714 VLASCGLDRYLRFWDTESRQLLSAVFLKQHLTSVVLDSQFNDEEV 848
           ++ SCGLD YLR WD ++RQLLSAVFLKQHLT+VV DS F++ EV
Sbjct: 313 LIGSCGLDSYLRLWDIKTRQLLSAVFLKQHLTNVVFDSSFSEREV 357


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