BLASTX nr result

ID: Cnidium21_contig00013440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013440
         (1367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313422.1| predicted protein [Populus trichocarpa] gi|2...   306   8e-81
ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   303   9e-80
gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]     302   2e-79
ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   297   4e-78
emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]   296   6e-78

>ref|XP_002313422.1| predicted protein [Populus trichocarpa] gi|222849830|gb|EEE87377.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  306 bits (784), Expect = 8e-81
 Identities = 161/276 (58%), Positives = 188/276 (68%), Gaps = 3/276 (1%)
 Frame = +1

Query: 43  MSFVFRGARPDIENGLSGVLPDRRAMRVQP-RPINTNSLAFLISVLLLFTILNS-QMSPN 216
           MSFVFRG+R DIE+G SG +P+R A+R+   RP+N+NSLAFL++VLLLF ILNS QMSPN
Sbjct: 1   MSFVFRGSRGDIESGFSGFIPERPAVRIHAARPVNSNSLAFLVTVLLLFMILNSHQMSPN 60

Query: 217 FLLWVVLGIFLMATTLRMYATCQRXXXXXXXXXXXXXXXXXRTEFRLHMPPSIXXXXXXX 396
           FLLW+V+G+FLMAT+LRMYATCQ+                  TE RLHMPPSI       
Sbjct: 61  FLLWLVVGVFLMATSLRMYATCQQLQAQARAHAAAASGLMGHTELRLHMPPSIAFATRGR 120

Query: 397 XXXXXXXXXXXDREFDDLDYETLRSLDSNNPPNTHSMSEEEINALPVHKYKVSNXXXXXX 576
                      DREFDDLDY+TLR+LDS N   T SM+EEEINALPVHKYKV        
Sbjct: 121 LQGLRLQLALLDREFDDLDYDTLRALDSGNASTT-SMTEEEINALPVHKYKVPVQENGSA 179

Query: 577 XXXXXXXXXXXXXXXXETE-LDKNLESPEDELTCTICLEQVTADELVRSLPCLHQFHATC 753
                           +++  D N+++ EDELTCTICLEQV   ELVRSLPCLHQFH  C
Sbjct: 180 SLQHASSSSAPAETKQDSKNADGNMKTSEDELTCTICLEQVNRGELVRSLPCLHQFHTNC 239

Query: 754 IDQWLHQQGTCPVCKLMVGSGWQESRESETDGDDMV 861
           ID WL QQGTCPVCK ++GSGWQESRESE+DG DMV
Sbjct: 240 IDPWLRQQGTCPVCKFLIGSGWQESRESESDGSDMV 275


>ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus]
          Length = 275

 Score =  303 bits (775), Expect = 9e-80
 Identities = 159/271 (58%), Positives = 178/271 (65%), Gaps = 3/271 (1%)
 Frame = +1

Query: 43  MSFVFRGAR-PDIENGLSGVLPDRRAMRVQP-RPINTNSLAFLISVLLLFTILNS-QMSP 213
           MSFVFRG R PDIENGLSG +P+RRAMRV   RP+N+NSLAFL++VLLLF ILNS QMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 214 NFLLWVVLGIFLMATTLRMYATCQRXXXXXXXXXXXXXXXXXRTEFRLHMPPSIXXXXXX 393
           NFLLW+VLG+FLMATTLRMYATCQ+                  TE RLHMPPSI      
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 394 XXXXXXXXXXXXDREFDDLDYETLRSLDSNNPPNTHSMSEEEINALPVHKYKVSNXXXXX 573
                       DREFDDLDYETLR+LDS+N P T SMSEE+INALPVHKYKVS      
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 574 XXXXXXXXXXXXXXXXXETELDKNLESPEDELTCTICLEQVTADELVRSLPCLHQFHATC 753
                                  + ++ EDELTC++CLEQV   EL+RSLPCLHQFHA C
Sbjct: 181 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 754 IDQWLHQQGTCPVCKLMVGSGWQESRESETD 846
           ID WL QQGTCPVCK    SGW E  + ETD
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETD 271


>gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]
          Length = 275

 Score =  302 bits (773), Expect = 2e-79
 Identities = 159/271 (58%), Positives = 178/271 (65%), Gaps = 3/271 (1%)
 Frame = +1

Query: 43  MSFVFRGAR-PDIENGLSGVLPDRRAMRVQP-RPINTNSLAFLISVLLLFTILNS-QMSP 213
           MSFVFRG R PDIENGLSG +P+RRAMRV   RP+N+NSLAFL++VLLLF ILNS QMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 214 NFLLWVVLGIFLMATTLRMYATCQRXXXXXXXXXXXXXXXXXRTEFRLHMPPSIXXXXXX 393
           NFLLW+VLG+FLMATTLRMYATCQ+                  TE RLHMPPSI      
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 394 XXXXXXXXXXXXDREFDDLDYETLRSLDSNNPPNTHSMSEEEINALPVHKYKVSNXXXXX 573
                       DREFDDLDYETLR+LDS+N P T SMSEE+INALPVHKYKVS      
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 574 XXXXXXXXXXXXXXXXXETELDKNLESPEDELTCTICLEQVTADELVRSLPCLHQFHATC 753
                                  + ++ EDELTC++CLEQV   EL+RSLPCLHQFHA C
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 754 IDQWLHQQGTCPVCKLMVGSGWQESRESETD 846
           ID WL QQGTCPVCK    SGW E  + ETD
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETD 271


>ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera]
           gi|296086209|emb|CBI31650.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  297 bits (761), Expect = 4e-78
 Identities = 155/275 (56%), Positives = 177/275 (64%), Gaps = 2/275 (0%)
 Frame = +1

Query: 43  MSFVFRGARPDIENGLSGVLPDRRAMRVQP-RPINTNSLAFLISVLLLFTILNS-QMSPN 216
           MSFVFRG+R DIE+G  G +P+RRA+RV   RP+NTNSLAFL++VLLLF ILNS QMSPN
Sbjct: 1   MSFVFRGSRADIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSPN 60

Query: 217 FLLWVVLGIFLMATTLRMYATCQRXXXXXXXXXXXXXXXXXRTEFRLHMPPSIXXXXXXX 396
           FL+W+VLGIFLMATTLRMYATCQ+                  TE RLHMPPSI       
Sbjct: 61  FLIWLVLGIFLMATTLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGR 120

Query: 397 XXXXXXXXXXXDREFDDLDYETLRSLDSNNPPNTHSMSEEEINALPVHKYKVSNXXXXXX 576
                      DREFDDLDYETLR+LDS N P T SMSEEEINALPVHKYKV+       
Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGGS 180

Query: 577 XXXXXXXXXXXXXXXXETELDKNLESPEDELTCTICLEQVTADELVRSLPCLHQFHATCI 756
                                 + ++P+DELTC++CLEQV   EL+RSLPCLHQFHA CI
Sbjct: 181 SMQQGSSSASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANCI 240

Query: 757 DQWLHQQGTCPVCKLMVGSGWQESRESETDGDDMV 861
           D WL QQGTCPVCK     GWQE+ +   D   MV
Sbjct: 241 DPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 275


>emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]
          Length = 262

 Score =  296 bits (759), Expect = 6e-78
 Identities = 156/275 (56%), Positives = 178/275 (64%), Gaps = 2/275 (0%)
 Frame = +1

Query: 43  MSFVFRGARPDIENGLSGVLPDRRAMRVQP-RPINTNSLAFLISVLLLFTILNS-QMSPN 216
           MSFVFRG+R DIE+G  G +P+RRA+RV   RP+NTNSLAFL++VLLLF ILNS QMSPN
Sbjct: 1   MSFVFRGSRADIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSPN 60

Query: 217 FLLWVVLGIFLMATTLRMYATCQRXXXXXXXXXXXXXXXXXRTEFRLHMPPSIXXXXXXX 396
           FL+W+VLGIFLMATTLRMYATCQ+                  TE RLHMPPSI       
Sbjct: 61  FLIWLVLGIFLMATTLRMYATCQQLQAHAQAHAAAASGLLGHTELRLHMPPSIALATRGR 120

Query: 397 XXXXXXXXXXXDREFDDLDYETLRSLDSNNPPNTHSMSEEEINALPVHKYKVSNXXXXXX 576
                      DREFDDLDYETLR+LDS N P T SMSEEEINALPVHKYKV+       
Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGGS 180

Query: 577 XXXXXXXXXXXXXXXXETELDKNLESPEDELTCTICLEQVTADELVRSLPCLHQFHATCI 756
                           +     + E+P+DELTC++CLEQV   EL+RSLPCLHQFHA CI
Sbjct: 181 SMQ-------------QGSSSASAEAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANCI 227

Query: 757 DQWLHQQGTCPVCKLMVGSGWQESRESETDGDDMV 861
           D WL QQGTCPVCK     GWQE+ +   D   MV
Sbjct: 228 DPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 262


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