BLASTX nr result
ID: Cnidium21_contig00013428
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00013428
(1648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 479 e-133
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 479 e-133
gb|ABB47537.2| retrotransposon protein, putative, unclassified [... 456 e-126
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]... 453 e-125
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group] 449 e-123
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 479 bits (1234), Expect = e-133
Identities = 257/584 (44%), Positives = 349/584 (59%), Gaps = 37/584 (6%)
Frame = -3
Query: 1646 NHMTGQKLKFSNLDEQVTGQVRFGDGSTVNIEGKGSIIFKCKNGEERMLKDVYYIPTLCN 1467
NHMTG + KF +LD +TG V+FGD STV I+GKGSI+F CKNG++ +L+DV+YIP+LC
Sbjct: 369 NHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQDVFYIPSLCC 428
Query: 1466 NIISLGQISEEGNRVTLNGEFLWVHDHQG-RLLMKVKRSSNRLYKIILKTRKQVCLLSKS 1290
N++SLGQ++E G+RV ++ + L V D RL+M+V+R+ NRLY+I LK VCLL++
Sbjct: 429 NMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKLATPVCLLTRM 488
Query: 1289 DEVSWLWHSRLGHVNFQAMNLMSRSGMVTGFPKINHPKGVGSGCLMAKQTRKSIPARAQF 1110
DE +WLWH+RLGHVNFQAM L++ GM G P I HP + CL+AKQ R+ PA A F
Sbjct: 489 DEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANF 548
Query: 1109 SASRRLELIHGELCGPISPTTSAGNRYFFLLVDDFSRVMWIYMLKSKDEALDVFKKFHVM 930
A LEL+H +LCGPI+PTT AGNRYF L+VDDFSR MW++++K+KD+AL+ F KF +
Sbjct: 549 RAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKDQALEAFTKFKPL 608
Query: 929 VEKGRDDK*ECLERIEEENSCLMILRHTVNKLELLARHFTTPYTPQQNGVVERRNRTVVE 750
E + + L R + L + + + RH T PY+PQQNGVVERRNR+V+
Sbjct: 609 AENTAGRRIKTL-RSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSPQQNGVVERRNRSVMA 667
Query: 749 MARSYLKQMKLPPGLWAEAVRHSVYVLNRFPTRSLTGQTPYEVWTETKPDIGHIRVFGCL 570
MARS +K M +P W EAVRH+VY+LNR PT+++ +TP+E WT KP +GH+RVFGC+
Sbjct: 668 MARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEAWTGRKPQLGHLRVFGCI 727
Query: 569 AHMRTPGNQVKKLDDRSVEVINLGKEPGTKGYRLYDPSSGKVYVSRDVQFEETK*WSWDI 390
AH + KKLDDRS + LG E G+K +RL+DP G+++VSRDV FEE W W +
Sbjct: 728 AHAKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRCGRIHVSRDVIFEENVPWQWSV 787
Query: 389 -------------EKEVETP------------QLEAFVVLNDPSTET*GVDQSYPYQSDI 285
E V+ P + + V P G S P
Sbjct: 788 VAGEQNSTEFTVEEDGVDAPPAGAPAYPVPRYRAPSPAVPQSPPASPVGASSSLPTSPQS 847
Query: 284 NDSGT--TTPKSSS----SDVNSDAERYDDSATPKHFKSLTGVYNAT-----XXXXXXXX 138
+ S T +TP + S + S + D P F+SL +
Sbjct: 848 SPSSTPPSTPATGSAGPVASPGSGGDLRSDEG-PVRFRSLEDIMREAPRVDLVEDEHDGD 906
Query: 137 XXXXXXXEPSSFKHATKDRVWRQAMKSEMESIERNGTWKLTELP 6
EPSS++ A W AM E+++IE+N TW LT LP
Sbjct: 907 ALLAEMEEPSSYREAAGQPAWENAMAQELQAIEKNSTWALTALP 950
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 479 bits (1234), Expect = e-133
Identities = 259/585 (44%), Positives = 351/585 (60%), Gaps = 38/585 (6%)
Frame = -3
Query: 1646 NHMTGQKLKFSNLDEQVTGQVRFGDGSTVNIEGKGSIIFKCKNGEERMLKDVYYIPTLCN 1467
NHMTG + KF +LD +TG V+FGD STV I+GKGSI+F CKNG++ +L+DV+YIP+LC
Sbjct: 369 NHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQDVFYIPSLCC 428
Query: 1466 NIISLGQISEEGNRVTLNGEFLWVHDHQG-RLLMKVKRSSNRLYKIILKTRKQVCLLSKS 1290
N++SLGQ++E G+RV ++ + L V D RL+M+V+R+ NRLY+I LK VCLL++
Sbjct: 429 NMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKLATPVCLLTRM 488
Query: 1289 DEVSWLWHSRLGHVNFQAMNLMSRSGMVTGFPKINHPKGVGSGCLMAKQTRKSIPARAQF 1110
DE +WLWH+RLGHVNFQAM L++ GM G P I HP + CL+AKQ R+ PA A F
Sbjct: 489 DEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANF 548
Query: 1109 SASRRLELIHGELCGPISPTTSAGNRYFFLLVDDFSRVMWIYMLKSKDEALDVFKKFHVM 930
A LEL+H +LCGPI+PTT AGNRYF L+VDDFSR MW++++K+KD+AL+ F KF +
Sbjct: 549 RAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKDQALEAFTKFKPL 608
Query: 929 VEKGRDDK*ECLERIEEENSCLMILRHTVNKLELLARHFTTPYTPQQNGVVERRNRTVVE 750
E + + L R + L + + + RH T PY+PQQNGVVERRNR+V+
Sbjct: 609 AENTAGRRIKTL-RSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSPQQNGVVERRNRSVMA 667
Query: 749 MARSYLKQMKLPPGLWAEAVRHSVYVLNRFPTRSLTGQTPYEVWTETKPDIGHIRVFGCL 570
MARS +K M +P W EAVRH+VY+LNR PT+++ +TP+E WT KP +GH+RVFGC+
Sbjct: 668 MARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEAWTGRKPQLGHLRVFGCI 727
Query: 569 AHMRTPGNQVKKLDDRSVEVINLGKEPGTKGYRLYDPSSGKVYVSRDVQFEETK*WSWDI 390
AH + KKLDDRS + LG E G+K +RL+DP G+++VSRDV FEE W W +
Sbjct: 728 AHAKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRCGRIHVSRDVIFEENVPWQWSV 787
Query: 389 -------------EKEVETP------------QLEAFVVLNDPSTET*GVDQSYPYQSDI 285
E V+ P + + V P G S P
Sbjct: 788 VAGEQNSTEFTVEEDGVDAPPAGAPAYPVPRYRAPSPAVPQSPLASPVGASPSLPTSPQS 847
Query: 284 NDSGT--TTPKSSS-----SDVNSDAERYDDSATPKHFKSLTGVYNAT-----XXXXXXX 141
+ S T +TP + S S +S R D+ P F+SL +
Sbjct: 848 SPSSTPPSTPATGSVGPVASPGSSGDLRSDEG--PVRFRSLEDIMREAPRVDLVEDEHDG 905
Query: 140 XXXXXXXXEPSSFKHATKDRVWRQAMKSEMESIERNGTWKLTELP 6
EPSS++ A W AM E+++IE+N TW LT LP
Sbjct: 906 DALLAEMEEPSSYREAAGQPAWENAMAQELQAIEKNSTWALTALP 950
>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 456 bits (1173), Expect = e-126
Identities = 245/556 (44%), Positives = 337/556 (60%), Gaps = 9/556 (1%)
Frame = -3
Query: 1646 NHMTGQKLKFSNLDEQVTGQVRFGDGSTVNIEGKGSIIFKCKNGEERMLKDVYYIPTLCN 1467
NHM+G + KF LDE +TGQVRFGD S+V I G GSI+F CKNG++ +L DVYYIP+LC
Sbjct: 216 NHMSGDRRKFRELDETMTGQVRFGDASSVQIMGMGSILFSCKNGDQWLLDDVYYIPSLCC 275
Query: 1466 NIISLGQISEEGNRVTLNGEFLWVHD-HQGRLLMKVKRSSNRLYKIILKTRKQVCLLSKS 1290
N++SLGQ++E G+RV ++G+ L V D + RL+MKV+R+SNRLY+I L+ QVCLL+
Sbjct: 276 NMVSLGQLTETGHRVMMDGDDLKVFDKNPWRLVMKVRRTSNRLYRIELQLASQVCLLASL 335
Query: 1289 DEVSWLWHSRLGHVNFQAMNLMSRSGMVTGFPKINHPKGVGSGCLMAKQTRKSIPARAQF 1110
D +WLWH+R+GHVNF A+ L+ M +G P ++HP + CL+AKQ R+ P A +
Sbjct: 336 DNPAWLWHARIGHVNFHALKLLVDKEMASGVPTVHHPNQLCQACLVAKQVRQPFPGMANY 395
Query: 1109 SASRRLELIHGELCGPISPTTSAGNRYFFLLVDDFSRVMWIYMLKSKDEALDVFKKFHVM 930
A LEL+H +LCGPI+P+T AGNRYF L+VDDFS MW++++K KD+AL VF+KF +
Sbjct: 396 RAEAPLELLHMDLCGPITPSTFAGNRYFMLIVDDFSNWMWVFVIKLKDQALAVFEKFKPL 455
Query: 929 VEK--GRDDK*ECLERIEEENSCLMILRHTVNKLELLARHFTTPYTPQQNGVVERRNRTV 756
+ GR K R + L V + RH T PY+PQQN VVERRNRTV
Sbjct: 456 AKNTVGRTIK---TLRTDRGGEFLSGKFARVCDAASIERHLTAPYSPQQNDVVERRNRTV 512
Query: 755 VEMARSYLKQMKLPPGLWAEAVRHSVYVLNRFPTRSLTGQTPYEVWTETKPDIGHIRVFG 576
+ MARS LK M +P +W EAVRH++++LN PT+++ +TP+E WT KP +GH+RVFG
Sbjct: 513 MAMARSLLKGMSVPGRMWGEAVRHAIFLLNWLPTKAMGNRTPFEAWTGKKPHLGHLRVFG 572
Query: 575 CLAHMRTPGNQVKKLDDRSVEVINLGKEPGTKGYRLYDPSSGKVYVSRDVQFEETK*WSW 396
C AH + +KKLDDRS + LG E G+K +RL+DP ++ VSRDV F+E W W
Sbjct: 573 CTAHAKVTAPHLKKLDDRSNPFVYLGVEEGSKAHRLFDPRRRQIIVSRDVVFDENTPWQW 632
Query: 395 DIEK-EVETPQLEAFVVLNDPSTET*GVDQSYPYQSDINDSGTTTPKSSSSDVNSDAERY 219
EV + + E E G +Q + +G +P ++ SDV
Sbjct: 633 SAAAGEVTSTEFEV--------EEPVGAEQ----PALAEQAGLASPHTAGSDVG------ 674
Query: 218 DDSATPKHFKSLTGVYNAT-----XXXXXXXXXXXXXXXEPSSFKHATKDRVWRQAMKSE 54
P ++SL + EP S++ AT + W AM E
Sbjct: 675 -----PVRYRSLAEIMLEAPRVDLVEDDDDARALLAEMEEPLSYREATGEPAWVNAMNKE 729
Query: 53 MESIERNGTWKLTELP 6
+E+IE+N TW L LP
Sbjct: 730 LEAIEKNKTWSLCMLP 745
>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108710383|gb|ABF98178.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1339
Score = 453 bits (1166), Expect = e-125
Identities = 253/585 (43%), Positives = 339/585 (57%), Gaps = 38/585 (6%)
Frame = -3
Query: 1646 NHMTGQKLKFSNLDEQVTGQVRFGDGSTVNIEGKGSIIFKCKNGEERMLKDVYYIPTLCN 1467
NHM+G KF LDE VTGQVRFGD S+V I GKGSI+F CKNG++ +L DVYYIP+L
Sbjct: 322 NHMSGDHRKFRELDETVTGQVRFGDASSVQIMGKGSILFSCKNGDQWLLDDVYYIPSLYC 381
Query: 1466 NIISLGQISEEGNRVTLNGEFLWVHD-HQGRLLMKVKRSSNRLYKIILKTRKQVCLLSKS 1290
N++SLGQ++E G+RV ++G+ L V D + RL+MKV+RSSNRLY+I L+ VCLL+
Sbjct: 382 NMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRSSNRLYRIELQLASPVCLLASL 441
Query: 1289 DEVSWLWHSRLGHVNFQAMNLMSRSGMVTGFPKINHPKGVGSGCLMAKQTRKSIPARAQF 1110
D+ +WLWH+RLGHVNF A+ L+ M G P ++HP + CL+AKQ R+ P A +
Sbjct: 442 DDPAWLWHARLGHVNFHALKLLVDKEMAAGVPAVHHPNQLCQACLVAKQVRQPFPGMANY 501
Query: 1109 SASRRLELIHGELCGPISPTTSAGNRYFFLLVDDFSRVMWIYMLKSKDEALDVFKKFHVM 930
A LEL+H +LCGPI+P+T GNRYF L+VDDFS MW++++KSKD+AL F+KF +
Sbjct: 502 LAEAPLELLHMDLCGPITPSTFTGNRYFMLIVDDFSHWMWVFVIKSKDQALAAFEKFKPL 561
Query: 929 VEKGRDDK*ECLERIEEENSCLMILRHTVNKLELLARHFTTPYTPQQNGVVERRNRTVVE 750
E + L R + L V + RH T PY+PQQNGVVERRNRTV+
Sbjct: 562 AENTAGRTIKTL-RTDRGGEFLSGEFARVCDAAGIERHLTVPYSPQQNGVVERRNRTVMA 620
Query: 749 MARSYLKQMKLPPGLWAEAVRHSVYVLNRFPTRSLTGQTPYEVWTETKPDIGHIRVFGCL 570
MARS LK M +P +W EAVRH+V++LNR PT+++ +TP+E WT KP +GH+RVFGC
Sbjct: 621 MARSLLKGMSVPGRMWGEAVRHAVFLLNRLPTKAMGNRTPFEAWTGKKPHLGHLRVFGCT 680
Query: 569 AHMRTPGNQVKKLDDRSVEVINLGKEPGTKGYRLYDPSSGKVYVSRDVQFEETK*WSW-- 396
AH + +KKLDDRS V+ LG E G+K +RL+DP ++ VSRDV F+E W W
Sbjct: 681 AHAKVTAPHLKKLDDRSNPVVYLGVEEGSKAHRLFDPRRRQIIVSRDVVFDENTPWQWSA 740
Query: 395 ------DIEKEVETP----------QLEAFVVLNDPS-----------TET*GVDQSYPY 297
E EVE P Q + P E G + P
Sbjct: 741 AAGEVTSTEFEVEEPVGAEQPAPAEQAGSVPWYRAPPAGRRAGKEPEVAEQRGTPPASPA 800
Query: 296 QSDINDSGTTTPKSS---SSDVNSDAERYDDSATPKHFKSLTGVYNAT-----XXXXXXX 141
+ T T SS S++V + P ++SL +
Sbjct: 801 RFSPTLPSTPTLGSSSTHSAEVQASPRTAGSDDEPVRYRSLAEIMIEAPRVDLVEDDDDT 860
Query: 140 XXXXXXXXEPSSFKHATKDRVWRQAMKSEMESIERNGTWKLTELP 6
EP+S++ A + W AM E+E+IE+N TW L LP
Sbjct: 861 EALLVEMEEPTSYREAAGEPAWVNAMNKELEAIEKNKTWSLCMLP 905
>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
Length = 893
Score = 449 bits (1154), Expect = e-123
Identities = 248/581 (42%), Positives = 340/581 (58%), Gaps = 34/581 (5%)
Frame = -3
Query: 1646 NHMTGQKLKFSNLDEQVTGQVRFGDGSTVNIEGKGSIIFKCKNGEERMLKDVYYIPTLCN 1467
NHM+G + KF LDE VTGQVRFGD S+V I G+GSI+F CKNG++ +L DVYYIP+LC
Sbjct: 182 NHMSGDRRKFRELDETVTGQVRFGDASSVQIMGQGSILFSCKNGDQWLLDDVYYIPSLCC 241
Query: 1466 NIISLGQISEEGNRVTLNGEFLWVHD-HQGRLLMKVKRSSNRLYKIILKTRKQVCLLSKS 1290
N++SLGQ++E G+RV ++G+ L V D + RL+MKV+R+SNRLY+I L+ VCLL+
Sbjct: 242 NMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRTSNRLYRIELQLASPVCLLASL 301
Query: 1289 DEVSWLWHSRLGHVNFQAMNLMSRSGMVTGFPKINHPKGVGSGCLMAKQTRKSIPARAQF 1110
D+ +WLWH+RLGHVNF A+ L+ MV G P ++HP + CL+AKQ R+S P A +
Sbjct: 302 DDPAWLWHARLGHVNFHALKLLVDKEMVAGVPAVHHPNQLCQACLVAKQVRQSFPGMANY 361
Query: 1109 SASRRLELIHGELCGPISPTTSAGNRYFFLLVDDFSRVMWIYMLKSKDEALDVFKKFHVM 930
A LEL+H +LCGPI+P+T AGNRYF L+VDDFSR MW++++KSKD+AL +KF +
Sbjct: 362 RAEAPLELLHMDLCGPITPSTFAGNRYFMLIVDDFSRWMWVFVIKSKDQALAASEKFKPL 421
Query: 929 VEK--GRDDK*ECLERIEEENSCLMILRHTVNKLELLARHFTTPYTPQQNGVVERRNRTV 756
E GR K R + + L V + RH T PY+PQQNGVVE RNRTV
Sbjct: 422 AENTAGRTIK---TLRTDRGSEFLSGEFARVCDAAGIERHLTAPYSPQQNGVVEHRNRTV 478
Query: 755 VEMARSYLKQMKLPPGLWAEAVRHSVYVLNRFPTRSLTGQTPYEVWTETKPDIGHIRVFG 576
+ MARS LK M +P +W EAVRH+V++LNR PT+++ +T +E W KP +GH+ VFG
Sbjct: 479 MAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLPTKAMGNRTSFEAWMGKKPHLGHLWVFG 538
Query: 575 CLAHMRTPGNQVKKLDDRSVEVINLGKEPGTKGYRLYDPSSGKVYVSRDVQFEETK*WSW 396
C AH + + KLDDRS + LG E G+K +RL+DP ++ VSRDV F+E W W
Sbjct: 539 CTAHTKVTAPHLMKLDDRSNPFVYLGVEEGSKAHRLFDPRRRQIIVSRDVVFDENTPWQW 598
Query: 395 ------------DIEKEVETPQLEAFVVLNDPS-----------TET*GVDQSYPYQSDI 285
++E+ V Q + P E G + P +
Sbjct: 599 SAAAGEVTSTEFEVEEPVGAEQAASVPWYRAPPAGRRAGKEPEVAEQRGTPPASPARFSP 658
Query: 284 NDSGTTTPKSS---SSDVNSDAERYDDSATPKHFKSLTGVYNAT-----XXXXXXXXXXX 129
T T SS S++V + P ++SL +
Sbjct: 659 TLPSTPTLGSSSTHSAEVQASPRTPGSDDGPVRYRSLVEIMLEAPRVDLVEDDDDAEALL 718
Query: 128 XXXXEPSSFKHATKDRVWRQAMKSEMESIERNGTWKLTELP 6
EP+S++ A + W AM E+E+IE+N TW L LP
Sbjct: 719 AEMEEPTSYREAAGETAWVNAMNKELEAIEKNRTWSLCMLP 759