BLASTX nr result

ID: Cnidium21_contig00013398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013398
         (1667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21551.3| unnamed protein product [Vitis vinifera]              198   3e-48
ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...   198   3e-48
emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]   198   3e-48
ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-47
ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glyc...   192   3e-46

>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  198 bits (504), Expect = 3e-48
 Identities = 103/124 (83%), Positives = 104/124 (83%)
 Frame = +2

Query: 1295 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 1474
            QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI
Sbjct: 131  QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 190

Query: 1475 ALSGHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXXDRKLYVGNLHFNMTEFQ 1654
            ALSGHLL GQPVMVKPSEAEKNLVQ                  DRKLYVGNLHFNMTE Q
Sbjct: 191  ALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQ 250

Query: 1655 LKQI 1666
            L+QI
Sbjct: 251  LRQI 254


>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score =  198 bits (504), Expect = 3e-48
 Identities = 103/124 (83%), Positives = 104/124 (83%)
 Frame = +2

Query: 1295 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 1474
            QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI
Sbjct: 169  QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 228

Query: 1475 ALSGHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXXDRKLYVGNLHFNMTEFQ 1654
            ALSGHLL GQPVMVKPSEAEKNLVQ                  DRKLYVGNLHFNMTE Q
Sbjct: 229  ALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQ 288

Query: 1655 LKQI 1666
            L+QI
Sbjct: 289  LRQI 292


>emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
          Length = 461

 Score =  198 bits (504), Expect = 3e-48
 Identities = 103/124 (83%), Positives = 104/124 (83%)
 Frame = +2

Query: 1295 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 1474
            QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI
Sbjct: 95   QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 154

Query: 1475 ALSGHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXXDRKLYVGNLHFNMTEFQ 1654
            ALSGHLL GQPVMVKPSEAEKNLVQ                  DRKLYVGNLHFNMTE Q
Sbjct: 155  ALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQ 214

Query: 1655 LKQI 1666
            L+QI
Sbjct: 215  LRQI 218


>ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|222853217|gb|EEE90764.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  194 bits (492), Expect = 8e-47
 Identities = 99/124 (79%), Positives = 102/124 (82%)
 Frame = +2

Query: 1295 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 1474
            QRTVF YQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY+EFYDAMSVPMAI
Sbjct: 20   QRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAI 79

Query: 1475 ALSGHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXXDRKLYVGNLHFNMTEFQ 1654
             LSG LLLGQPVMVKPSEAEKNLVQ                  DRKLYVGNLHFNMTE Q
Sbjct: 80   TLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFGAVDRKLYVGNLHFNMTEMQ 139

Query: 1655 LKQI 1666
            L+Q+
Sbjct: 140  LRQL 143


>ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 550

 Score =  192 bits (487), Expect = 3e-46
 Identities = 102/124 (82%), Positives = 104/124 (83%)
 Frame = +2

Query: 1295 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 1474
            QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI
Sbjct: 190  QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 249

Query: 1475 ALSGHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXXDRKLYVGNLHFNMTEFQ 1654
            ALSG LLLGQPVMVKPSEAEKNLVQ                  DRKLYVGNLHFNMTE Q
Sbjct: 250  ALSGQLLLGQPVMVKPSEAEKNLVQ-SNASGGAAGVTGPYGAVDRKLYVGNLHFNMTESQ 308

Query: 1655 LKQI 1666
            L++I
Sbjct: 309  LREI 312


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