BLASTX nr result

ID: Cnidium21_contig00013394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013394
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-...   200   1e-49
emb|CBI20795.3| unnamed protein product [Vitis vinifera]              200   1e-49
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   200   1e-49
ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-...   199   2e-49
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...   198   4e-49

>ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1002

 Score =  200 bits (509), Expect = 1e-49
 Identities = 98/124 (79%), Positives = 109/124 (87%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1    QCPGSPKVSKFPSLPDMSPKKVSAVHNVYVSPLRASKMDALNSHSSKSYYACVGESTRAY 180
            QCPGSPK+S FP+LPDMSPKKVSA HNVYVSPLR+SKM+AL SHSSKSYYACVGEST AY
Sbjct: 878  QCPGSPKISPFPTLPDMSPKKVSATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAY 937

Query: 181  QSPSKDLTAINNHLNGPKKLRGMLKFD--DVGIVSDSLVSQSFHQQNGSCASSSGTPVKK 354
            QSPSKDLTAINN LNG +K+RG L FD  DVG+VSDS+V+ S + QNGSCASSSG P+K 
Sbjct: 938  QSPSKDLTAINNRLNGNRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPLKS 997

Query: 355  EQPD 366
            EQPD
Sbjct: 998  EQPD 1001


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  200 bits (509), Expect = 1e-49
 Identities = 100/123 (81%), Positives = 108/123 (87%), Gaps = 1/123 (0%)
 Frame = +1

Query: 1    QCPGSPKVSKFPSLPDMSPKKVSAVHNVYVSPLRASKMDALNSHSSKSYYACVGESTRAY 180
            QCP SPK+S FPSLPDMSPKKVSA HNVYVSPLR+SKMDAL SHSSKSYYACVGEST AY
Sbjct: 883  QCPESPKISPFPSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAY 942

Query: 181  QSPSKDLTAINNHLNGPKKLRGMLKFDDV-GIVSDSLVSQSFHQQNGSCASSSGTPVKKE 357
            QSPSKDLTAINN LN  +KLRG L FDDV G+VSDSLV++S + QNGSCASSSG P+K E
Sbjct: 943  QSPSKDLTAINNRLNSTRKLRGALNFDDVEGLVSDSLVAKSLYLQNGSCASSSGAPLKLE 1002

Query: 358  QPD 366
            QPD
Sbjct: 1003 QPD 1005


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
            gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
            Full=Retinoblastoma-related protein
            gi|359392418|gb|AEV45768.1| RBR protein [Vitis
            pseudoreticulata]
          Length = 1007

 Score =  200 bits (509), Expect = 1e-49
 Identities = 100/123 (81%), Positives = 108/123 (87%), Gaps = 1/123 (0%)
 Frame = +1

Query: 1    QCPGSPKVSKFPSLPDMSPKKVSAVHNVYVSPLRASKMDALNSHSSKSYYACVGESTRAY 180
            QCP SPK+S FPSLPDMSPKKVSA HNVYVSPLR+SKMDAL SHSSKSYYACVGEST AY
Sbjct: 884  QCPESPKISPFPSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAY 943

Query: 181  QSPSKDLTAINNHLNGPKKLRGMLKFDDV-GIVSDSLVSQSFHQQNGSCASSSGTPVKKE 357
            QSPSKDLTAINN LN  +KLRG L FDDV G+VSDSLV++S + QNGSCASSSG P+K E
Sbjct: 944  QSPSKDLTAINNRLNSTRKLRGALNFDDVEGLVSDSLVAKSLYLQNGSCASSSGAPLKLE 1003

Query: 358  QPD 366
            QPD
Sbjct: 1004 QPD 1006


>ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1014

 Score =  199 bits (507), Expect = 2e-49
 Identities = 98/124 (79%), Positives = 108/124 (87%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1    QCPGSPKVSKFPSLPDMSPKKVSAVHNVYVSPLRASKMDALNSHSSKSYYACVGESTRAY 180
            QCPGSPK+S FP+LPDMSPKKVSA HNVYVSPLR+SKM+AL SHSSKSYYACVGEST AY
Sbjct: 890  QCPGSPKISPFPTLPDMSPKKVSATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAY 949

Query: 181  QSPSKDLTAINNHLNGPKKLRGMLKFDDV--GIVSDSLVSQSFHQQNGSCASSSGTPVKK 354
            QSPSKDLTAINN LNG +K+RG L FDDV  G+VSDS+V+ S + QNGSCASSSG P K 
Sbjct: 950  QSPSKDLTAINNRLNGNRKVRGPLNFDDVDFGLVSDSMVANSLYLQNGSCASSSGAPFKS 1009

Query: 355  EQPD 366
            EQPD
Sbjct: 1010 EQPD 1013


>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
            gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
            Full=Retinoblastoma-related protein
            gi|223530511|gb|EEF32393.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1020

 Score =  198 bits (504), Expect = 4e-49
 Identities = 98/124 (79%), Positives = 107/124 (86%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1    QCPGSPKVSKFPSLPDMSPKKVSAVHNVYVSPLRASKMDALNSHSSKSYYACVGESTRAY 180
            QCP SPKVS FPSLPDMSPKKVSA HNVYVSPLR SKMDAL SHSSKSYYACVGEST AY
Sbjct: 896  QCPASPKVSPFPSLPDMSPKKVSAAHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAY 955

Query: 181  QSPSKDLTAINNHLNGPKKLRGMLKFD--DVGIVSDSLVSQSFHQQNGSCASSSGTPVKK 354
            QSPSKDLTAINN LNG + +RG L FD  DVG+VSDS+V++S + QNGSCAS+SG P+K 
Sbjct: 956  QSPSKDLTAINNRLNGNRNIRGSLNFDDVDVGLVSDSMVAKSLYLQNGSCASTSGAPLKT 1015

Query: 355  EQPD 366
            EQPD
Sbjct: 1016 EQPD 1019


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