BLASTX nr result

ID: Cnidium21_contig00013393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013393
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265199.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   271   1e-70
emb|CBI16734.3| unnamed protein product [Vitis vinifera]              271   1e-70
ref|XP_004140914.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   268   1e-69
gb|ACJ84140.1| unknown [Medicago truncatula] gi|388506834|gb|AFK...   261   1e-67
ref|NP_001239966.1| uncharacterized protein LOC100816956 [Glycin...   257   2e-66

>ref|XP_002265199.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           assembly factor 3-like [Vitis vinifera]
          Length = 173

 Score =  271 bits (693), Expect = 1e-70
 Identities = 135/169 (79%), Positives = 153/169 (90%)
 Frame = +3

Query: 108 RQRAVATLPTLMRALKTNNNSINKPPNTPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYT 287
           RQRAVATLPTLMRAL+       KP   PLPSLRRAFSLYDQINLIDNVPEDQLRFQGYT
Sbjct: 5   RQRAVATLPTLMRALRKEPP---KPTTQPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYT 61

Query: 288 DTGFTVTGKNYEGSVLCIGNLILSWTPKTFAEITADSLSIFQTVRPIPEILILGCGRYIQ 467
           DTGFTV+G  YEGS+LC+GN++LSW PK  +EITADSLSIF+ VRPIPEILILGCGR+I+
Sbjct: 62  DTGFTVSGVQYEGSLLCVGNVLLSWGPKKLSEITADSLSIFRIVRPIPEILILGCGRHIE 121

Query: 468 QVNPELRQFIRSTGMKLEAIDSKNAASTYNILNEEGRIVAAAILPYGVT 614
           QV+PELR++I+STGMKLEA+DS+NAASTYNILNEEGRIVAAA+LPYGV+
Sbjct: 122 QVDPELRRYIQSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVS 170


>emb|CBI16734.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score =  271 bits (693), Expect = 1e-70
 Identities = 135/169 (79%), Positives = 153/169 (90%)
 Frame = +3

Query: 108 RQRAVATLPTLMRALKTNNNSINKPPNTPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYT 287
           RQRAVATLPTLMRAL+       KP   PLPSLRRAFSLYDQINLIDNVPEDQLRFQGYT
Sbjct: 4   RQRAVATLPTLMRALRKEPP---KPTTQPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYT 60

Query: 288 DTGFTVTGKNYEGSVLCIGNLILSWTPKTFAEITADSLSIFQTVRPIPEILILGCGRYIQ 467
           DTGFTV+G  YEGS+LC+GN++LSW PK  +EITADSLSIF+ VRPIPEILILGCGR+I+
Sbjct: 61  DTGFTVSGVQYEGSLLCVGNVLLSWGPKKLSEITADSLSIFRIVRPIPEILILGCGRHIE 120

Query: 468 QVNPELRQFIRSTGMKLEAIDSKNAASTYNILNEEGRIVAAAILPYGVT 614
           QV+PELR++I+STGMKLEA+DS+NAASTYNILNEEGRIVAAA+LPYGV+
Sbjct: 121 QVDPELRRYIQSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVS 169


>ref|XP_004140914.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           assembly factor 3-like [Cucumis sativus]
           gi|449454472|ref|XP_004144978.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex assembly
           factor 3-like [Cucumis sativus]
           gi|449463645|ref|XP_004149542.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex assembly
           factor 3-like [Cucumis sativus]
          Length = 171

 Score =  268 bits (685), Expect = 1e-69
 Identities = 136/174 (78%), Positives = 153/174 (87%), Gaps = 1/174 (0%)
 Frame = +3

Query: 99  MAGRQRAVATLPTLMRALKTNNNSINKPP-NTPLPSLRRAFSLYDQINLIDNVPEDQLRF 275
           MA RQ+AVATL  L+R LK   N   KP  + PLPSLRRAFSLYDQINLIDNVPEDQLRF
Sbjct: 1   MAARQKAVATLLNLIRTLK---NDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRF 57

Query: 276 QGYTDTGFTVTGKNYEGSVLCIGNLILSWTPKTFAEITADSLSIFQTVRPIPEILILGCG 455
           Q YT+TGFTV G +YEGS+LC+GNL++SWTPK F+EIT+DSLSIFQ VRPIPEILILGCG
Sbjct: 58  QRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQIVRPIPEILILGCG 117

Query: 456 RYIQQVNPELRQFIRSTGMKLEAIDSKNAASTYNILNEEGRIVAAAILPYGVTS 617
           RY + VNPELRQFIRSTGMKLEA+D++NA STYNILNEEGRIVAAA+LPYGV+S
Sbjct: 118 RYTEPVNPELRQFIRSTGMKLEAVDTRNATSTYNILNEEGRIVAAALLPYGVSS 171


>gb|ACJ84140.1| unknown [Medicago truncatula] gi|388506834|gb|AFK41483.1| unknown
           [Medicago truncatula]
          Length = 177

 Score =  261 bits (668), Expect = 1e-67
 Identities = 135/177 (76%), Positives = 150/177 (84%), Gaps = 4/177 (2%)
 Frame = +3

Query: 99  MAGRQRAVATLPTLMRALKTNNNSINKPP--NTP--LPSLRRAFSLYDQINLIDNVPEDQ 266
           MA RQRAV  LP L+R+L+  +    KP   N P  LPSLRRAFSLYDQINLIDNVPEDQ
Sbjct: 1   MAVRQRAVTALPNLIRSLRNEHPLKLKPSPHNNPNSLPSLRRAFSLYDQINLIDNVPEDQ 60

Query: 267 LRFQGYTDTGFTVTGKNYEGSVLCIGNLILSWTPKTFAEITADSLSIFQTVRPIPEILIL 446
           LRFQG+ DTGFTV G  YEGS+LC+GNLI+SW P  F+EITA+SLS FQ VRPIPEILI+
Sbjct: 61  LRFQGFKDTGFTVNGVEYEGSLLCVGNLIMSWKPTKFSEITAESLSFFQIVRPIPEILIV 120

Query: 447 GCGRYIQQVNPELRQFIRSTGMKLEAIDSKNAASTYNILNEEGRIVAAAILPYGVTS 617
           GCGR IQ V+PELRQFIRSTGMKLEA+DS+NAASTYNILNEEGRIVAAA+LPYGVTS
Sbjct: 121 GCGRNIQHVDPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVTS 177


>ref|NP_001239966.1| uncharacterized protein LOC100816956 [Glycine max]
           gi|255648257|gb|ACU24581.1| unknown [Glycine max]
          Length = 174

 Score =  257 bits (657), Expect = 2e-66
 Identities = 132/177 (74%), Positives = 150/177 (84%), Gaps = 4/177 (2%)
 Frame = +3

Query: 99  MAGRQRAVATLPTLMRALKTNNNSINKPPN----TPLPSLRRAFSLYDQINLIDNVPEDQ 266
           MA RQRAV+ LPTL+R L+       KP N      LPSLRRAFSLYDQINLID VPEDQ
Sbjct: 1   MAVRQRAVSALPTLLRTLRKEPL---KPRNHAHVNALPSLRRAFSLYDQINLIDQVPEDQ 57

Query: 267 LRFQGYTDTGFTVTGKNYEGSVLCIGNLILSWTPKTFAEITADSLSIFQTVRPIPEILIL 446
           LRFQGY DTGFTV G  YEGS+LC+GNL++SW PK F+EITADSLSIFQ VRPIPEILI+
Sbjct: 58  LRFQGYNDTGFTVNGVEYEGSLLCVGNLLMSWKPKKFSEITADSLSIFQIVRPIPEILII 117

Query: 447 GCGRYIQQVNPELRQFIRSTGMKLEAIDSKNAASTYNILNEEGRIVAAAILPYGVTS 617
           GCG+ IQ V+PELR+FIRSTG+KLEA+DS+NAASTYNILNEEGRIVAAA+LP+GV+S
Sbjct: 118 GCGKNIQHVDPELRRFIRSTGIKLEAVDSRNAASTYNILNEEGRIVAAALLPHGVSS 174


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