BLASTX nr result

ID: Cnidium21_contig00013386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013386
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [G...   155   8e-36
ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [G...   155   8e-36
ref|XP_003609377.1| WD repeat-containing protein [Medicago trunc...   148   8e-34
ref|XP_002885113.1| hypothetical protein ARALYDRAFT_479043 [Arab...   147   1e-33
dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana]        145   7e-33

>ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [Glycine max]
          Length = 1134

 Score =  155 bits (391), Expect = 8e-36
 Identities = 81/158 (51%), Positives = 95/158 (60%)
 Frame = +2

Query: 2    TMRTCMPPPPAATFLALHPQDNNILALGMEDSSIQIYDTRIDKICTIADTQ*FGSN*NEY 181
            TM T MPPPPAATFLA HPQDNNI+A+GMEDSSIQIY+ R+D++ T              
Sbjct: 877  TMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKT-------------- 922

Query: 182  KYTLMV*LLNDIGDRQVRGSSGSSYWPCLFHVLKALVSSGADGQICVWSMDGWNKQASKS 361
                           +++G           HVL  LVSSGAD Q+CVWS DGW KQASK 
Sbjct: 923  ---------------KLKGHQKRITGLAFSHVLNVLVSSGADSQLCVWSTDGWEKQASKF 967

Query: 362  VHIPSGQAPKPCGQHRVQFH*DQTHLLVFHENLIAIYE 475
            + +PSG+ P P    RVQFH DQTHLL  HE  IA+YE
Sbjct: 968  LQMPSGRPPAPLADTRVQFHLDQTHLLAVHETQIALYE 1005


>ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [Glycine max]
          Length = 1232

 Score =  155 bits (391), Expect = 8e-36
 Identities = 81/158 (51%), Positives = 95/158 (60%)
 Frame = +2

Query: 2    TMRTCMPPPPAATFLALHPQDNNILALGMEDSSIQIYDTRIDKICTIADTQ*FGSN*NEY 181
            TM T MPPPPAATFLA HPQDNNI+A+GMEDSSIQIY+ R+D++ T              
Sbjct: 975  TMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKT-------------- 1020

Query: 182  KYTLMV*LLNDIGDRQVRGSSGSSYWPCLFHVLKALVSSGADGQICVWSMDGWNKQASKS 361
                           +++G           HVL  LVSSGAD Q+CVWS DGW KQASK 
Sbjct: 1021 ---------------KLKGHQKRITGLAFSHVLNVLVSSGADSQLCVWSTDGWEKQASKF 1065

Query: 362  VHIPSGQAPKPCGQHRVQFH*DQTHLLVFHENLIAIYE 475
            + +PSG+ P P    RVQFH DQTHLL  HE  IA+YE
Sbjct: 1066 LQMPSGRPPAPLADTRVQFHLDQTHLLAVHETQIALYE 1103


>ref|XP_003609377.1| WD repeat-containing protein [Medicago truncatula]
            gi|355510432|gb|AES91574.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 1132

 Score =  148 bits (374), Expect = 8e-34
 Identities = 78/158 (49%), Positives = 94/158 (59%)
 Frame = +2

Query: 2    TMRTCMPPPPAATFLALHPQDNNILALGMEDSSIQIYDTRIDKICTIADTQ*FGSN*NEY 181
            TM T MPPPPAATFLA HPQDNNI+A+GM+DSSIQIY+ R+D++ T              
Sbjct: 874  TMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKT-------------- 919

Query: 182  KYTLMV*LLNDIGDRQVRGSSGSSYWPCLFHVLKALVSSGADGQICVWSMDGWNKQASKS 361
                           +++G           HVL  LVSSGAD Q+CVWS DGW KQ +K 
Sbjct: 920  ---------------KLKGHQKRITGLAFSHVLNILVSSGADSQLCVWSTDGWEKQTNKF 964

Query: 362  VHIPSGQAPKPCGQHRVQFH*DQTHLLVFHENLIAIYE 475
            + +P+G+A  P    RVQFH DQTHLL  HE  IAIYE
Sbjct: 965  LQMPNGRALAPLADTRVQFHLDQTHLLAVHETQIAIYE 1002


>ref|XP_002885113.1| hypothetical protein ARALYDRAFT_479043 [Arabidopsis lyrata subsp.
            lyrata] gi|297330953|gb|EFH61372.1| hypothetical protein
            ARALYDRAFT_479043 [Arabidopsis lyrata subsp. lyrata]
          Length = 1136

 Score =  147 bits (372), Expect = 1e-33
 Identities = 77/158 (48%), Positives = 95/158 (60%)
 Frame = +2

Query: 2    TMRTCMPPPPAATFLALHPQDNNILALGMEDSSIQIYDTRIDKICTIADTQ*FGSN*NEY 181
            TM T M PPPAAT LA HPQDNNI+A+GM+DSSIQIY+ R+D++ +              
Sbjct: 877  TMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKS-------------- 922

Query: 182  KYTLMV*LLNDIGDRQVRGSSGSSYWPCLFHVLKALVSSGADGQICVWSMDGWNKQASKS 361
                           +++G           +VL  LVSSGAD Q+CVWSMDGW KQASK 
Sbjct: 923  ---------------KLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQ 967

Query: 362  VHIPSGQAPKPCGQHRVQFH*DQTHLLVFHENLIAIYE 475
            + IPSG +P P    RVQFH DQTH+LV H + +AIYE
Sbjct: 968  IQIPSGHSPNPLAHTRVQFHQDQTHVLVVHASQLAIYE 1005


>dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1128

 Score =  145 bits (366), Expect = 7e-33
 Identities = 76/158 (48%), Positives = 94/158 (59%)
 Frame = +2

Query: 2    TMRTCMPPPPAATFLALHPQDNNILALGMEDSSIQIYDTRIDKICTIADTQ*FGSN*NEY 181
            TM T M PPPAAT LA HPQDNNI+A+GM+DSSIQIY+ R+D++ +              
Sbjct: 871  TMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKS-------------- 916

Query: 182  KYTLMV*LLNDIGDRQVRGSSGSSYWPCLFHVLKALVSSGADGQICVWSMDGWNKQASKS 361
                           +++G           +VL  LVSSGAD Q+CVWSMDGW KQASK 
Sbjct: 917  ---------------KLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQ 961

Query: 362  VHIPSGQAPKPCGQHRVQFH*DQTHLLVFHENLIAIYE 475
            + IPSG +P P    RVQFH DQ H+LV H + +AIYE
Sbjct: 962  IQIPSGHSPNPLAHTRVQFHQDQIHVLVVHASQLAIYE 999


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