BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013345
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189598.1| Ninja-family protein AFP3 [Arabidopsis thaliana...   101   2e-19
dbj|BAB01982.1| unnamed protein product [Arabidopsis thaliana]        101   2e-19
ref|NP_001150339.1| ninja-family protein 6 [Zea mays] gi|2267133...    79   6e-13
ref|XP_003516385.1| PREDICTED: ninja-family protein AFP2-like [G...    79   8e-13
ref|XP_002884305.1| two or more abres-containing gene 2 [Arabido...    78   2e-12

>ref|NP_189598.1| Ninja-family protein AFP3 [Arabidopsis thaliana]
           gi|79313999|ref|NP_001030794.1| Ninja-family protein
           AFP3 [Arabidopsis thaliana]
           gi|145332713|ref|NP_001078222.1| Ninja-family protein
           AFP3 [Arabidopsis thaliana]
           gi|75165510|sp|Q94F39.1|AFP3_ARATH RecName:
           Full=Ninja-family protein AFP3; AltName: Full=ABI
           five-binding protein 3; Short=ABI5-binding protein 3
           gi|14326574|gb|AAK60331.1|AF385741_1 AT3g29575/MWE13_2
           [Arabidopsis thaliana] gi|22137322|gb|AAM91506.1|
           AT3g29575/MWE13_2 [Arabidopsis thaliana]
           gi|222424245|dbj|BAH20080.1| AT3G29575 [Arabidopsis
           thaliana] gi|332644067|gb|AEE77588.1| Ninja-family
           protein AFP3 [Arabidopsis thaliana]
           gi|332644068|gb|AEE77589.1| Ninja-family protein AFP3
           [Arabidopsis thaliana] gi|332644069|gb|AEE77590.1|
           Ninja-family protein AFP3 [Arabidopsis thaliana]
          Length = 231

 Score =  101 bits (251), Expect = 2e-19
 Identities = 80/237 (33%), Positives = 114/237 (48%), Gaps = 26/237 (10%)
 Frame = -3

Query: 634 KETEIEETNGN--IDLNLSLSLNGRFGVDPQRNHKVTGSSSHSNMLITPDKRSSAIFDEI 461
           K+  + E +G   I+L+L LSLNGRFGVDP    ++  S+S  ++++      S      
Sbjct: 3   KKQRLSEEDGEVEIELDLGLSLNGRFGVDPLAKTRLMRSTSVLDLVVNDRSGLSR----- 57

Query: 460 GAELKMWPSPSLPTGTQEKEMGRGRKELQSLALMDANKRRS------------------- 338
                   + SLP  T+E+   R RKELQSL  ++A ++RS                   
Sbjct: 58  --------TCSLPVETEEE--WRKRKELQSLRRLEAKRKRSEKQRKHKACGGEEKVVEEG 107

Query: 337 -LDSSGSSTISYFQNQTIQAGKGFPDKNQGKPVEVVAENISPKAIPAEKFKGRVFNKLAD 161
            + SSGS +    +  T+      P         V     S ++ P    K    N + D
Sbjct: 108 SIGSSGSGSSGLSEVDTL-----LPPVQATTNKSVETSPSSAQSQPENLGKEASQNIIED 162

Query: 160 MPNVFTT---ISGRKIKGFLSMYNE-EEICIICACHGFSMPPAEFIKHGGGGDVANP 2
           MP V TT    +G+KI GFL  Y + EE+ I+C CHG  + PAEF+KH GGGDVA+P
Sbjct: 163 MPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHP 219


>dbj|BAB01982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 261

 Score =  101 bits (251), Expect = 2e-19
 Identities = 80/237 (33%), Positives = 114/237 (48%), Gaps = 26/237 (10%)
 Frame = -3

Query: 634 KETEIEETNGN--IDLNLSLSLNGRFGVDPQRNHKVTGSSSHSNMLITPDKRSSAIFDEI 461
           K+  + E +G   I+L+L LSLNGRFGVDP    ++  S+S  ++++      S      
Sbjct: 3   KKQRLSEEDGEVEIELDLGLSLNGRFGVDPLAKTRLMRSTSVLDLVVNDRSGLSR----- 57

Query: 460 GAELKMWPSPSLPTGTQEKEMGRGRKELQSLALMDANKRRS------------------- 338
                   + SLP  T+E+   R RKELQSL  ++A ++RS                   
Sbjct: 58  --------TCSLPVETEEE--WRKRKELQSLRRLEAKRKRSEKQRKHKACGGEEKVVEEG 107

Query: 337 -LDSSGSSTISYFQNQTIQAGKGFPDKNQGKPVEVVAENISPKAIPAEKFKGRVFNKLAD 161
            + SSGS +    +  T+      P         V     S ++ P    K    N + D
Sbjct: 108 SIGSSGSGSSGLSEVDTL-----LPPVQATTNKSVETSPSSAQSQPENLGKEASQNIIED 162

Query: 160 MPNVFTT---ISGRKIKGFLSMYNE-EEICIICACHGFSMPPAEFIKHGGGGDVANP 2
           MP V TT    +G+KI GFL  Y + EE+ I+C CHG  + PAEF+KH GGGDVA+P
Sbjct: 163 MPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHP 219


>ref|NP_001150339.1| ninja-family protein 6 [Zea mays]
           gi|226713361|sp|B6TNQ7.1|NNJA6_MAIZE RecName:
           Full=Ninja-family protein 6 gi|195638544|gb|ACG38740.1|
           RNA-binding protein [Zea mays]
           gi|413955475|gb|AFW88124.1| putative DUF1675 domain
           containing family protein [Zea mays]
          Length = 288

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 75/252 (29%), Positives = 106/252 (42%), Gaps = 53/252 (21%)
 Frame = -3

Query: 598 DLNLSLSLNGRFGVDPQRNHKVTGSSSHSNMLITPDKRSSAIFDEIGAELKMWPSPSLPT 419
           +L+L LSL GRFG D +R      SS  S   ++    S        A L +  + SLPT
Sbjct: 31  ELSLGLSLGGRFGTDAKRPRLARSSSIASVCSVS----SLHADPSPAAPLPLLRTTSLPT 86

Query: 418 GTQEKEMGRGRKELQSLALMDANK----------------------RRSLDSSGSSTISY 305
            T+E+   R  +E+QS   ++A +                      RRS  S GS++ S 
Sbjct: 87  ETEEERWRR--REMQSRRRLEARRKRVERRNSMGSVSVAPADAVSGRRSNASQGSNSAST 144

Query: 304 FQ--------NQTIQAGKGF------------PDKNQGKPVEVVAENISPKAIPAEKFKG 185
            +        NQ+  A                P K   KP+   A    P+         
Sbjct: 145 TEQGIGGSMFNQSADAKSPSTSDNRNQNDMLPPTKAAEKPLNGTATEQQPRLRTLGSLTT 204

Query: 184 RVFNK-------LADMPNVFTTISG---RKIKGFLSMYNE-EEICIICACHGFSMPPAEF 38
           R  +        + DMP V + + G   R+I GFL  Y + E++ I+C CHG  + PAEF
Sbjct: 205 RTGSTSDIRKLMMEDMPMVSSKVEGPNARRIDGFLYRYKKGEDVRIVCVCHGSFLTPAEF 264

Query: 37  IKHGGGGDVANP 2
           +KH GGGDV NP
Sbjct: 265 VKHAGGGDVPNP 276


>ref|XP_003516385.1| PREDICTED: ninja-family protein AFP2-like [Glycine max]
          Length = 407

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 14/138 (10%)
 Frame = -3

Query: 373 SLALMDANKRRSLDSSGSSTISYFQNQTIQ-------AGKGFP-DKNQGKPVEVVAENIS 218
           S++ MD+       S G +  S   NQ++Q       AG G   ++N  +  +  AEN S
Sbjct: 258 SMSEMDSKAFLGSSSCGEAK-SPVSNQSMQERSSQDPAGSGGKMNENVTRTSKAEAENPS 316

Query: 217 PKAIPAEKFKGRVF--NKLADMPNVFTT---ISGRKIKGFLSMYNE-EEICIICACHGFS 56
            K  PA+K  GR    N + DMP VFT     +GR+I+G L  Y + EE+ I+C CHG  
Sbjct: 317 RKPHPAQKITGRHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNF 376

Query: 55  MPPAEFIKHGGGGDVANP 2
           + PAEF+KH GGGDVA P
Sbjct: 377 LSPAEFVKHAGGGDVAYP 394



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 40/119 (33%), Positives = 62/119 (52%)
 Frame = -3

Query: 634 KETEIEETNGNIDLNLSLSLNGRFGVDPQRNHKVTGSSSHSNMLITPDKRSSAIFDEIGA 455
           ++ + EE +  ++LNL LSL GRFGVD     K    SS     +   ++  A+     A
Sbjct: 79  QQEQHEEDDEEVELNLGLSLGGRFGVDKNAKKKRLLRSSSVVGTMPLFRQDDAVAPSAAA 138

Query: 454 ELKMWPSPSLPTGTQEKEMGRGRKELQSLALMDANKRRSLDSSGSSTISYFQNQTIQAG 278
              +  + SLPT T+E+   R RKE+Q+L  M+A +RRS    GS  +     + ++AG
Sbjct: 139 FPALMRTSSLPTETEEE--WRRRKEMQTLRRMEAKRRRSEKQRGSREVFAGAGEEVEAG 195


>ref|XP_002884305.1| two or more abres-containing gene 2 [Arabidopsis lyrata subsp.
           lyrata] gi|297330145|gb|EFH60564.1| two or more
           abres-containing gene 2 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 309

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 35/242 (14%)
 Frame = -3

Query: 640 KGKETEIEETNGNIDLNLSLSLNGRFGVDPQ----RNHKVTGSSSHSNMLITPDKRSSAI 473
           K KE E EE   +++L L LSLNG+FG DP+    +N  +  SSS        ++RS   
Sbjct: 50  KKKEDEAEEDEKDVELTLGLSLNGQFGTDPRSRKRKNFDLGRSSSIPEGFFFDEQRSDGG 109

Query: 472 FDEIGAELKMWPSPSLPTGTQ-----EKEMGRGRKELQSLALM-------------DANK 347
            D    +     + SLP  T+     E E  R R E ++ A M             D N+
Sbjct: 110 SDMFQLDR----TRSLPVVTEIEIGKETEKKRKRPE-KTRAFMEFPVTNRGTYLTEDKNR 164

Query: 346 RRSLDSSGSSTISYFQNQTIQAGKGFPDK--------NQGKPVEVVAENISPKAIPAEKF 191
            ++ ++  +     F+    + GK   D+          GK      +  + +    EK 
Sbjct: 165 GQAAETEKARAFLEFKIPPGKEGKEDKDRFVVTGPVNGNGKNGNTAKKKKNVEVSGMEKA 224

Query: 190 KGRVFNKLADMPNVFTT---ISGRKIKGFLSMYN--EEEICIICACHGFSMPPAEFIKHG 26
           +    N L DMP V T      G++++GFL  Y   +EE+ I+C CHG  + PAEF++HG
Sbjct: 225 R----NILEDMPCVSTRDVGADGKRVEGFLYWYGGKKEEVKIVCVCHGSFLSPAEFVRHG 280

Query: 25  GG 20
           GG
Sbjct: 281 GG 282