BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013332
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [...   406   e-111
ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative ...   399   e-108
ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago ...   397   e-108
ref|XP_002320845.1| predicted protein [Populus trichocarpa] gi|1...   396   e-108
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-l...   395   e-107

>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
           gi|147867252|emb|CAN81194.1| hypothetical protein
           VITISV_022853 [Vitis vinifera]
           gi|297745390|emb|CBI40470.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score =  406 bits (1044), Expect = e-111
 Identities = 207/240 (86%), Positives = 217/240 (90%)
 Frame = +1

Query: 79  MEFVSPEGLRLDGRRPMEMRQLRAEIGIVAKADGSASFEMGNTKVIAAVYGPREVQNRSQ 258
           MEFVSPEGLRLDGRRPMEMRQ+R EIG VAKADGSA FEMGNTKVIAAVYGPREV+NRSQ
Sbjct: 1   MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60

Query: 259 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISMVIRQTMEACIMTHLMPRSQIDIF 438
           Q++DQALVRCEYTMANFST            STEIS+VIRQTMEACI+THLMPRSQIDIF
Sbjct: 61  QISDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 120

Query: 439 VQVLQADGGTRSACINAATLALADAGIPMSDIVTSCSAGYLNSTPLLDLNYVEDSAGGPD 618
           VQVLQADGGTRSACINAATLALADAGIPM D+VTSCSAGYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 619 VTVGILPKSTKVTLLQMDSKLPMDIFENVMQLATEGCKAVANYIHEVLLEKTKQLDKHRG 798
           VTVGILPK  KVTLLQMD+KLPMDIFENVMQLA EGCKA+ANYI EVLLE TKQL+  RG
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPMDIFENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240


>ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
           gi|223529966|gb|EEF31893.1| Exosome complex exonuclease
           RRP41, putative [Ricinus communis]
          Length = 241

 Score =  399 bits (1024), Expect = e-108
 Identities = 202/241 (83%), Positives = 216/241 (89%)
 Frame = +1

Query: 79  MEFVSPEGLRLDGRRPMEMRQLRAEIGIVAKADGSASFEMGNTKVIAAVYGPREVQNRSQ 258
           ME+VSPEGLRLDGRRPMEMRQLRA+IG V+KADGSA FEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 259 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISMVIRQTMEACIMTHLMPRSQIDIF 438
           Q+ DQALVRCEYTMANFST            STEIS+VIRQTME CI+THLMPRSQIDI+
Sbjct: 61  QIIDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 439 VQVLQADGGTRSACINAATLALADAGIPMSDIVTSCSAGYLNSTPLLDLNYVEDSAGGPD 618
           VQVLQADGGTRSACINAATLALADAGIPM D+VTSCSAGYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 619 VTVGILPKSTKVTLLQMDSKLPMDIFENVMQLATEGCKAVANYIHEVLLEKTKQLDKHRG 798
           VTVGILPK  KVTLLQMD+KLP+D FENVMQLA EGCKA+ANYI E+LLE TKQL+  RG
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREILLENTKQLEYRRG 240

Query: 799 V 801
           +
Sbjct: 241 L 241


>ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago truncatula]
           gi|355501548|gb|AES82751.1| Exosome complex exonuclease
           RRP41 [Medicago truncatula]
          Length = 241

 Score =  397 bits (1020), Expect = e-108
 Identities = 201/240 (83%), Positives = 216/240 (90%)
 Frame = +1

Query: 79  MEFVSPEGLRLDGRRPMEMRQLRAEIGIVAKADGSASFEMGNTKVIAAVYGPREVQNRSQ 258
           ME+VSPEGLR DGRRPMEMRQ+RAEIG V+KADGSA FEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1   MEYVSPEGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 259 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISMVIRQTMEACIMTHLMPRSQIDIF 438
           Q++D+ALVRCEY+MANFST            STEIS+VIRQTME CI+THLMPRSQIDI+
Sbjct: 61  QMSDKALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 439 VQVLQADGGTRSACINAATLALADAGIPMSDIVTSCSAGYLNSTPLLDLNYVEDSAGGPD 618
           VQVLQADGGTRSACINAATLALADAGIPM D+VTSCSAGYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 619 VTVGILPKSTKVTLLQMDSKLPMDIFENVMQLATEGCKAVANYIHEVLLEKTKQLDKHRG 798
           VTVGILPK  KVTLLQMDSKLP+DI ENVMQLATEGCKA+ANYI E+LLE TKQL+  RG
Sbjct: 181 VTVGILPKLDKVTLLQMDSKLPIDILENVMQLATEGCKAIANYIREILLENTKQLEYRRG 240


>ref|XP_002320845.1| predicted protein [Populus trichocarpa] gi|118489833|gb|ABK96716.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222861618|gb|EEE99160.1| predicted protein [Populus
           trichocarpa]
          Length = 241

 Score =  396 bits (1017), Expect = e-108
 Identities = 201/241 (83%), Positives = 216/241 (89%)
 Frame = +1

Query: 79  MEFVSPEGLRLDGRRPMEMRQLRAEIGIVAKADGSASFEMGNTKVIAAVYGPREVQNRSQ 258
           MEFV+PEGLRLDGRRPMEMRQLRA+IG VAKADGSA FEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1   MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 259 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISMVIRQTMEACIMTHLMPRSQIDIF 438
           Q+NDQALVRCEY+MANFST            STEIS+VIRQ ME CI+T+LMPRSQIDI+
Sbjct: 61  QINDQALVRCEYSMANFSTGDRRRKPKGDRRSTEISLVIRQAMEECILTNLMPRSQIDIY 120

Query: 439 VQVLQADGGTRSACINAATLALADAGIPMSDIVTSCSAGYLNSTPLLDLNYVEDSAGGPD 618
           VQVLQADGGTRSACINAATLALADAGIPM D+VTSCSAG+LNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLDLNYVEDSAGGPD 180

Query: 619 VTVGILPKSTKVTLLQMDSKLPMDIFENVMQLATEGCKAVANYIHEVLLEKTKQLDKHRG 798
           VTVGILPK  KVTLLQMD+KLP+D FENVMQLA EGCKA+ANYI EVLLE TKQL+  RG
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREVLLENTKQLEYRRG 240

Query: 799 V 801
           +
Sbjct: 241 L 241


>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
          Length = 241

 Score =  395 bits (1015), Expect = e-107
 Identities = 200/241 (82%), Positives = 216/241 (89%)
 Frame = +1

Query: 79  MEFVSPEGLRLDGRRPMEMRQLRAEIGIVAKADGSASFEMGNTKVIAAVYGPREVQNRSQ 258
           ME+VSPEGLRLDGRRPMEMRQ+RAEIG V+KADGSA FEMGNTKVIAAVYGPREVQNR+Q
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60

Query: 259 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISMVIRQTMEACIMTHLMPRSQIDIF 438
           Q++  ALVRCEY+MANFST            STEIS+VIRQTMEACI+THL+PRSQIDI+
Sbjct: 61  QISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120

Query: 439 VQVLQADGGTRSACINAATLALADAGIPMSDIVTSCSAGYLNSTPLLDLNYVEDSAGGPD 618
           VQVLQADGGTRSACINAATLALADAGIPM D+VTSCSAGYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 619 VTVGILPKSTKVTLLQMDSKLPMDIFENVMQLATEGCKAVANYIHEVLLEKTKQLDKHRG 798
           VT+GILPK  KVTLLQMDSKLP+DI ENVMQLA EGCKA+ANYI EVLLE TKQL+  RG
Sbjct: 181 VTLGILPKLDKVTLLQMDSKLPIDILENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240

Query: 799 V 801
           V
Sbjct: 241 V 241