BLASTX nr result

ID: Cnidium21_contig00013324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013324
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]               412   e-113
emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]   407   e-112
ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-li...   407   e-111
emb|CBI34244.3| unnamed protein product [Vitis vinifera]              407   e-111
emb|CAK22424.1| matrix attachment region binding protein [Beta v...   403   e-110

>dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]
          Length = 555

 Score =  412 bits (1058), Expect = e-113
 Identities = 211/242 (87%), Positives = 220/242 (90%)
 Frame = -1

Query: 727 LLLFETPAGFALFKVLDEGKLSKVEDLSKEFDTVDTARKIVKLKAFSKFENTSEALSAAT 548
           L+LFETPAGFALFKVLDEGKLSKVEDL KEF T D+ARK+VKLKAFSKFENTSEALSAAT
Sbjct: 2   LVLFETPAGFALFKVLDEGKLSKVEDLWKEFSTTDSARKVVKLKAFSKFENTSEALSAAT 61

Query: 547 LLIDSKPSKGLRKFLRAHCDGETLAVADSKLGNAIKEKLQIDCFHNNAAMELMRGVRSQL 368
           LLIDSKPSKGLRKFL+AHCDGETL VADSKLGNAIKEKLQIDC HNNA MELMRGVRSQL
Sbjct: 62  LLIDSKPSKGLRKFLKAHCDGETLGVADSKLGNAIKEKLQIDCVHNNAVMELMRGVRSQL 121

Query: 367 TELISGLGAQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV 188
           TELI+GLG+QDLAPMSLGLSHSLSRYKLKFSPDKVDTMI+QAI LLDDLDKELNTYAMRV
Sbjct: 122 TELITGLGSQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNTYAMRV 181

Query: 187 REWYGWHFPELAKIVQDNILYAKSVKLMGDRTNAAKLDFXXXXXXXXXXXXXXAAMISMG 8
           REWYGWHFPELAKIVQDNILYAK+VKLMGDR NAAKLDF              A+MISMG
Sbjct: 182 REWYGWHFPELAKIVQDNILYAKAVKLMGDRVNAAKLDFSEILPEEVEAELKEASMISMG 241

Query: 7   TE 2
           TE
Sbjct: 242 TE 243


>emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]
          Length = 472

 Score =  407 bits (1047), Expect = e-112
 Identities = 210/242 (86%), Positives = 220/242 (90%)
 Frame = -1

Query: 727 LLLFETPAGFALFKVLDEGKLSKVEDLSKEFDTVDTARKIVKLKAFSKFENTSEALSAAT 548
           L+LFETPAGFALFKVLDEGKLSKVEDL KEF T ++AR++VKLKAFSKFENT+EALSAAT
Sbjct: 2   LVLFETPAGFALFKVLDEGKLSKVEDLWKEFSTSESARQVVKLKAFSKFENTTEALSAAT 61

Query: 547 LLIDSKPSKGLRKFLRAHCDGETLAVADSKLGNAIKEKLQIDCFHNNAAMELMRGVRSQL 368
           LLIDSKPSKGLRKFLR HCDGETLAVADSKLGNAIKEKLQI+C HNNA MELMRGVRSQL
Sbjct: 62  LLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVHNNAVMELMRGVRSQL 121

Query: 367 TELISGLGAQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV 188
           TELISGL  QDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV
Sbjct: 122 TELISGLAVQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV 181

Query: 187 REWYGWHFPELAKIVQDNILYAKSVKLMGDRTNAAKLDFXXXXXXXXXXXXXXAAMISMG 8
           REWYGWHFPELAKIVQDNILY+K+VKLMG+RTNAAKLDF              AAMISMG
Sbjct: 182 REWYGWHFPELAKIVQDNILYSKAVKLMGNRTNAAKLDFSEILPEEVETELKEAAMISMG 241

Query: 7   TE 2
           TE
Sbjct: 242 TE 243


>ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-like [Vitis vinifera]
          Length = 573

 Score =  407 bits (1046), Expect = e-111
 Identities = 210/242 (86%), Positives = 220/242 (90%)
 Frame = -1

Query: 727 LLLFETPAGFALFKVLDEGKLSKVEDLSKEFDTVDTARKIVKLKAFSKFENTSEALSAAT 548
           L+LFETPAGFALFKVLDEGKLSKVEDL KEF + ++AR++VKLKAFSKFENT+EALSAAT
Sbjct: 2   LVLFETPAGFALFKVLDEGKLSKVEDLWKEFSSSESARQVVKLKAFSKFENTTEALSAAT 61

Query: 547 LLIDSKPSKGLRKFLRAHCDGETLAVADSKLGNAIKEKLQIDCFHNNAAMELMRGVRSQL 368
           LLIDSKPSKGLRKFLR HCDGETLAVADSKLGNAIKEKLQI+C HNNA MELMRGVRSQL
Sbjct: 62  LLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVHNNAVMELMRGVRSQL 121

Query: 367 TELISGLGAQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV 188
           TELISGL  QDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV
Sbjct: 122 TELISGLAVQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV 181

Query: 187 REWYGWHFPELAKIVQDNILYAKSVKLMGDRTNAAKLDFXXXXXXXXXXXXXXAAMISMG 8
           REWYGWHFPELAKIVQDNILYAK+VKLMG+RTNAAKLDF              AAMISMG
Sbjct: 182 REWYGWHFPELAKIVQDNILYAKAVKLMGNRTNAAKLDFSEILPEEVETELKEAAMISMG 241

Query: 7   TE 2
           TE
Sbjct: 242 TE 243


>emb|CBI34244.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  407 bits (1046), Expect = e-111
 Identities = 210/242 (86%), Positives = 220/242 (90%)
 Frame = -1

Query: 727 LLLFETPAGFALFKVLDEGKLSKVEDLSKEFDTVDTARKIVKLKAFSKFENTSEALSAAT 548
           L+LFETPAGFALFKVLDEGKLSKVEDL KEF + ++AR++VKLKAFSKFENT+EALSAAT
Sbjct: 2   LVLFETPAGFALFKVLDEGKLSKVEDLWKEFSSSESARQVVKLKAFSKFENTTEALSAAT 61

Query: 547 LLIDSKPSKGLRKFLRAHCDGETLAVADSKLGNAIKEKLQIDCFHNNAAMELMRGVRSQL 368
           LLIDSKPSKGLRKFLR HCDGETLAVADSKLGNAIKEKLQI+C HNNA MELMRGVRSQL
Sbjct: 62  LLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVHNNAVMELMRGVRSQL 121

Query: 367 TELISGLGAQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV 188
           TELISGL  QDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV
Sbjct: 122 TELISGLAVQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV 181

Query: 187 REWYGWHFPELAKIVQDNILYAKSVKLMGDRTNAAKLDFXXXXXXXXXXXXXXAAMISMG 8
           REWYGWHFPELAKIVQDNILYAK+VKLMG+RTNAAKLDF              AAMISMG
Sbjct: 182 REWYGWHFPELAKIVQDNILYAKAVKLMGNRTNAAKLDFSEILPEEVETELKEAAMISMG 241

Query: 7   TE 2
           TE
Sbjct: 242 TE 243


>emb|CAK22424.1| matrix attachment region binding protein [Beta vulgaris]
          Length = 572

 Score =  403 bits (1035), Expect = e-110
 Identities = 206/242 (85%), Positives = 221/242 (91%)
 Frame = -1

Query: 727 LLLFETPAGFALFKVLDEGKLSKVEDLSKEFDTVDTARKIVKLKAFSKFENTSEALSAAT 548
           L+LFETPAGFALFKVLDEGKLS++EDL KEF +VD+ARK+VKLKAF KFENT+EALSAAT
Sbjct: 2   LVLFETPAGFALFKVLDEGKLSQIEDLWKEFTSVDSARKVVKLKAFDKFENTAEALSAAT 61

Query: 547 LLIDSKPSKGLRKFLRAHCDGETLAVADSKLGNAIKEKLQIDCFHNNAAMELMRGVRSQL 368
           LLIDSKPSKGLRKFL+AHC GETLAVADSKLGNAIKEKLQI+C HNN+ MELMRGVRSQL
Sbjct: 62  LLIDSKPSKGLRKFLKAHCKGETLAVADSKLGNAIKEKLQIECVHNNSVMELMRGVRSQL 121

Query: 367 TELISGLGAQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRV 188
           +ELISGLGAQDLAPMSLGLSHSLSRYKLKFSP+KVDTMIIQAIGLLDDLDKELNTYAMRV
Sbjct: 122 SELISGLGAQDLAPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRV 181

Query: 187 REWYGWHFPELAKIVQDNILYAKSVKLMGDRTNAAKLDFXXXXXXXXXXXXXXAAMISMG 8
           REWYGWHFPEL+KIVQDNILYAK+VKLMG+R NAAKLDF              AAMISMG
Sbjct: 182 REWYGWHFPELSKIVQDNILYAKAVKLMGNRVNAAKLDFSEVLPEEVETGLKEAAMISMG 241

Query: 7   TE 2
           TE
Sbjct: 242 TE 243


Top