BLASTX nr result

ID: Cnidium21_contig00013320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013320
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529032.1| 40S ribosomal protein S8, putative [Ricinus ...   160   2e-37
ref|XP_004148331.1| PREDICTED: 40S ribosomal protein S8-like [Cu...   157   8e-37
ref|NP_001236970.1| uncharacterized protein LOC100500112 [Glycin...   157   1e-36
ref|XP_002298850.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycin...   154   8e-36

>ref|XP_002529032.1| 40S ribosomal protein S8, putative [Ricinus communis]
           gi|223531512|gb|EEF33343.1| 40S ribosomal protein S8,
           putative [Ricinus communis]
          Length = 219

 Score =  160 bits (404), Expect = 2e-37
 Identities = 79/111 (71%), Positives = 84/111 (75%)
 Frame = -1

Query: 540 APFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKIQSRQEDRKIDPH 361
           APFKQWYLQHYGVDIGR                       SNHV+RK++ RQ+ RK+DPH
Sbjct: 108 APFKQWYLQHYGVDIGRKKKTAAAKKEGEEGEAATEEVKKSNHVLRKLEKRQQIRKLDPH 167

Query: 360 IEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAAA 208
           IEEQFGGGRLLA ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 168 IEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 218


>ref|XP_004148331.1| PREDICTED: 40S ribosomal protein S8-like [Cucumis sativus]
           gi|449507060|ref|XP_004162922.1| PREDICTED: 40S
           ribosomal protein S8-like [Cucumis sativus]
          Length = 219

 Score =  157 bits (398), Expect = 8e-37
 Identities = 78/111 (70%), Positives = 82/111 (73%)
 Frame = -1

Query: 540 APFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKIQSRQEDRKIDPH 361
           APFKQWYLQHYGVDIGR                       SNHV RKI+ RQ+DRK+DPH
Sbjct: 108 APFKQWYLQHYGVDIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPH 167

Query: 360 IEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAAA 208
           IEEQF  GRL+A ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 168 IEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 218


>ref|NP_001236970.1| uncharacterized protein LOC100500112 [Glycine max]
           gi|255629291|gb|ACU14990.1| unknown [Glycine max]
          Length = 217

 Score =  157 bits (397), Expect = 1e-36
 Identities = 78/110 (70%), Positives = 83/110 (75%)
 Frame = -1

Query: 540 APFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKIQSRQEDRKIDPH 361
           APFKQWYLQHYGV+IGR                       SNHV RK++ RQ+DRK+D H
Sbjct: 108 APFKQWYLQHYGVEIGRKKKVASKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRKLDSH 167

Query: 360 IEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 211
           IEEQFGGGRLLA ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA
Sbjct: 168 IEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217


>ref|XP_002298850.1| predicted protein [Populus trichocarpa] gi|222846108|gb|EEE83655.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  155 bits (393), Expect = 3e-36
 Identities = 75/111 (67%), Positives = 84/111 (75%)
 Frame = -1

Query: 540 APFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKIQSRQEDRKIDPH 361
           APFKQWYLQHYG+DIGR                       SNHV+RK++ RQ+ RK+DPH
Sbjct: 108 APFKQWYLQHYGIDIGRKKKTTAAKKEGEEGEAVTEEVKKSNHVLRKLEKRQQIRKLDPH 167

Query: 360 IEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAAA 208
           IEEQFG GRLLA+ISSRPGQCGRADGYILEGKELEFY+KK+QRKKGKGA A
Sbjct: 168 IEEQFGSGRLLASISSRPGQCGRADGYILEGKELEFYLKKIQRKKGKGAGA 218


>ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycine max]
           gi|255636051|gb|ACU18370.1| unknown [Glycine max]
          Length = 217

 Score =  154 bits (389), Expect = 8e-36
 Identities = 76/110 (69%), Positives = 82/110 (74%)
 Frame = -1

Query: 540 APFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKIQSRQEDRKIDPH 361
           APF+QWYLQHYGV+IGR                       SNHV RK++ RQ+DR +D H
Sbjct: 108 APFRQWYLQHYGVEIGRKKKVAAKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRNLDSH 167

Query: 360 IEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 211
           IEEQFGGGRLLA ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA
Sbjct: 168 IEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217


Top