BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013313
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   109   8e-27
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   114   8e-23
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...   105   4e-20
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   103   1e-19
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    89   1e-16

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  109 bits (273), Expect(2) = 8e-27
 Identities = 70/213 (32%), Positives = 98/213 (46%)
 Frame = +3

Query: 498  LNYKHVEVSPICPQCRHSPESITHCLISCSFARAC*QGAGFSDLLFNGESFFDWLKEAFE 677
            L  +HV+    CP CR   E+  H L+ C  AR     +G + L  N  SF DWL   F 
Sbjct: 538  LTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFA 597

Query: 678  RLKIEDMKLLSVVCWSIWRGRNELVWNQKYDSVGEVVALARAILCAQNRTPIASQEYVYP 857
                        VCW +W  RN++VWN +     +VV     +L +           V  
Sbjct: 598  YCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANETLATAVTV 657

Query: 858  GDGCEHWTKPATNTIKINVDAAIFEESTRYGYAWVARNSEGSLVEAKVIGKHGRVNPEVA 1037
                  W KP    IKINVD A+F +    G   V R+ +G  +         +  P+V 
Sbjct: 658  PSYSSKWQKPDYGWIKINVDGAVFPDKGAIGA--VFRDHQGRFMGGFAKPFPHQTLPKVV 715

Query: 1038 EIIGVKEALSWLKQKWL*RVVIESDCLTVVQAI 1136
            E +GV+E LSW+ ++   R+V+E+DCL VVQAI
Sbjct: 716  EALGVREVLSWIHERSRSRIVVETDCLRVVQAI 748



 Score = 38.5 bits (88), Expect(2) = 8e-27
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +2

Query: 1121 SCPGYL*HVSMVSAFGLLVEDCKRLLKDSSMVSLVFIKRSANQGAHHLARASIDFSERSF 1300
            SCP         ++FG ++ DC  +L+    V +V+ +RSAN  AH LA  +  F+    
Sbjct: 752  SCPN--------TSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSLHI 803

Query: 1301 TEYYALIGFLNVLMHDI 1351
              Y      L+ L +D+
Sbjct: 804  WGYTPPQCILSCLHYDV 820


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  114 bits (284), Expect = 8e-23
 Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 4/209 (1%)
 Frame = +3

Query: 498  LNYKHVEVSPICPQCRHSPESITHCLISCSFARAC*QGAGFSDLLFNGESFFDWLKEAFE 677
            L  ++V++ P+C  C   PE++ H L  CS AR C    GF            W++  F 
Sbjct: 458  LRMRYVDLDPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFSFPTESPICSWIQNFFI 517

Query: 678  RLKIEDMKLLSVVCWSIWRGRNELVWNQKYDSVGEVVALARAILCAQNRTPIASQEYVYP 857
                +    +++VC S+W  RN  VWN++ ++   V++ A  +L  + R   A +E   P
Sbjct: 518  DNHEDTCAKMALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPP 577

Query: 858  ----GDGCEHWTKPATNTIKINVDAAIFEESTRYGYAWVARNSEGSLVEAKVIGKHGRVN 1025
                 D    WTKP    +KIN D A+F +  R G   V R+S G ++ A+   + GR  
Sbjct: 578  LGHNTDVTRKWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFT 637

Query: 1026 PEVAEIIGVKEALSWLKQKWL*RVVIESD 1112
               AE + +KEALS++K   + +   E D
Sbjct: 638  AREAEALSMKEALSYMKDYQMDKCFFELD 666


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
            gi|223534693|gb|EEF36385.1| hypothetical protein
            RCOM_0596960 [Ricinus communis]
          Length = 270

 Score =  105 bits (261), Expect = 4e-20
 Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
 Frame = +3

Query: 528  ICPQCRHSPESITHCLISCSFARAC*QGAGFSDLLFNGE---SFFDWLKEAFERLKIEDM 698
            +CP C +  ESI H LI CSF +   +    S L+  G    S  DWL+E F +      
Sbjct: 82   LCPLCSNPGESIYHALIDCSFVK---EVWVISVLVSRGNRNGSICDWLQEIFTKFDKSTW 138

Query: 699  KLLSVVCWSIWRGRNELVWNQKYDSV-----GEVVALARAILCAQNRTPIASQEYVYPGD 863
              ++ + W++W  RNE+VWN K         G V  L R ++  Q   P      V+   
Sbjct: 139  HCIAAIVWNLWIHRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSPDNNEVF-NH 197

Query: 864  GCEHWTKPATNTIKINVDAAIFEESTRYGYAWVARNSEGSLVEAKVIG-KHGRVNPEVAE 1040
                W KP + ++K NVDA+ F +    G  +V RN+EG+L+ A++       +N ++AE
Sbjct: 198  NLAKWKKPKSGSLKCNVDASTFNQQGMIGAGYVLRNTEGALLGARITSFVQSDLNLKLAE 257

Query: 1041 IIGVKEALSWLK 1076
             +  +EALSW K
Sbjct: 258  ALSFREALSWTK 269


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538337|gb|EEF39944.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 483

 Score =  103 bits (257), Expect = 1e-19
 Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
 Frame = +3

Query: 531  CPQCRHSPESITHCLISCSFARAC*QGAGFSDLLFNGESFFDWLKEAFERLKIEDMKLLS 710
            CP C   PE+I H L+ C       +       L    +  +  +  FE      +    
Sbjct: 225  CPCCVSQPETIMHILVLCDVTTQSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFV 284

Query: 711  VVCWSIWRGRNELVWNQKYDSVGEVVALARAILC----AQNRTPIASQEYVYPGDGCEHW 878
            V+ WS+W   N++VWN K  S   V + A + L     A+  T        + G  C  W
Sbjct: 285  VLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKARKLTDYHQLGRHFAGGDCL-W 343

Query: 879  TKPATNTIKINVDAAIFEESTRYGYAWVARNSEGSLVEAKVIGKHGRVNPEVAEIIGVKE 1058
             KPAT   K+NVDA+   E  + G ++V R++ G  +   +I +    NP+VAE   +KE
Sbjct: 344  QKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEAWALKE 403

Query: 1059 ALSWLKQKWL*RVVIESDCLTVVQAICSMLVWCLHLVCWWKIAKDYSRI 1205
            ALSW+  K +  V IE+DCL  ++ +   L    +L+C  K  +D  R+
Sbjct: 404  ALSWIHAKGMEEVQIETDCLRNIELLEEELHPNSYLLCLLKDCQDLLRV 452


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 89.4 bits (220), Expect(2) = 1e-16
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 9/228 (3%)
 Frame = +3

Query: 486  CLSKLNYKHVEVSPICPQCRHSPESITHCLISCSFARAC*QGAGFSDLLFNGE--SFFDW 659
            C+  L +KH+  S  C +C+   ES  H    CS   A  + AGF   L +G+  SF   
Sbjct: 1352 CMEVLLWKHIAHSASCFRCQQGRESPVHATWGCSCCVAVFERAGFYSKLSSGQFPSFIHL 1411

Query: 660  LKEAFERLKIEDMKLLSVVCWSIWRGRNELVWNQK-------YDSVGEVVALARAILCAQ 818
            L  AF  L  E+++L +V+ W  W  RN              Y++  + +   +  L  +
Sbjct: 1412 LHHAFSTLDKEELQLFAVLLWLNWHERNNCYHKGAVVPSDIIYENGVKFLKCFKEALGCR 1471

Query: 819  NRTPIASQEYVYPGDGCEHWTKPATNTIKINVDAAIFEESTRYGYAWVARNSEGSLVEAK 998
                + + E V PG     W  P++  +K+N D A   +   +G   + R+  GSL+ A 
Sbjct: 1472 AGVEVKAVEEVVPGS-LRRWQAPSSGQLKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAG 1530

Query: 999  VIGKHGRVNPEVAEIIGVKEALSWLKQKWL*RVVIESDCLTVVQAICS 1142
                   V+  VAE++ +K  L  + ++ L  +++ESDCL  +  + S
Sbjct: 1531 GKNFQHPVSSLVAELLAIKVGLDLVVERRLRNIMVESDCLEAIHLLNS 1578



 Score = 24.6 bits (52), Expect(2) = 1e-16
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 1166 GLLVEDCKRLLKDSSMVSLVFIKRSANQGAHHLAR 1270
            G LVED +  +   ++ S+  ++R  N  AH +A+
Sbjct: 1587 GGLVEDIQNTMALVNISSIYHVRREGNTAAHAIAK 1621