BLASTX nr result

ID: Cnidium21_contig00013273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013273
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]          235   1e-59
ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ...   235   1e-59
ref|XP_002311060.1| predicted protein [Populus trichocarpa] gi|2...   231   3e-58
ref|XP_003541430.1| PREDICTED: probable pectate lyase 12-like [G...   228   2e-57
ref|NP_196051.2| pectate lyase family protein [Arabidopsis thali...   226   9e-57

>gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]
          Length = 496

 Score =  235 bits (600), Expect = 1e-59
 Identities = 133/317 (41%), Positives = 184/317 (58%), Gaps = 14/317 (4%)
 Frame = -3

Query: 1171 SIPLNLNSQCGMNSKAVVNDRLQRITSNNLGINYKQ---------QACLTGNPIFQCWKC 1019
            ++ LNL       +  VV D +QR    N+ I+ +Q          +CLTGNP+  CW+C
Sbjct: 23   TLNLNLTLPHQHPNPEVVVDEVQRRL--NVSISRRQVLSVQENDGSSCLTGNPVDDCWRC 80

Query: 1018 DPNWGNDRQHLADCARXXXXXXXXXXXGQLYVVIDPSDKNLINPKPGTLRHALIQSKPLW 839
            DPNW N+RQ LADC             GQ YVV D SD++ INP PGTLRHA+IQ++PLW
Sbjct: 81   DPNWQNNRQRLADCGIGFGQDAMGGKGGQFYVVTDSSDEDPINPAPGTLRHAVIQTQPLW 140

Query: 838  IIFSDNMKIKLSGQLYVGSFKTIDGRGADVRITGKGCLMLEDVTNIIIHDIGISNCDPAD 659
            I FS NM IKL  +L V SFKTIDGRGA+V ITG+GC+ L+ V+N+IIH + + +C P+ 
Sbjct: 141  ITFSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHGVHVHHCVPSG 200

Query: 658  SAYINISETQVKHAGKAKGNGITIIRSHNIWVDTCTISDCSYELIDATLLSTALTFSNNL 479
            +A I  S T V   GK+ G+GI+I  S  IW+D C++S C   LIDA + ST +T SNN 
Sbjct: 201  NADIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMGSTGITISNNY 260

Query: 478  YFNKSELLL----DRQDNNGLKQVTTVYNRYGKHLTQ-IPPSRRNXXXXXXXXXXXGEEV 314
            + +  E++L    D+   +   QVT  +N +G+ L Q +P  RR             E  
Sbjct: 261  FSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTRWEMY 320

Query: 313  SDGQNGDRGTNTSGKDF 263
            + G + +   N+ G  +
Sbjct: 321  AIGGSANPTINSQGNRY 337


>ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
            gi|296085972|emb|CBI31413.3| unnamed protein product
            [Vitis vinifera]
          Length = 496

 Score =  235 bits (600), Expect = 1e-59
 Identities = 133/317 (41%), Positives = 184/317 (58%), Gaps = 14/317 (4%)
 Frame = -3

Query: 1171 SIPLNLNSQCGMNSKAVVNDRLQRITSNNLGINYKQ---------QACLTGNPIFQCWKC 1019
            ++ LNL       +  VV D +QR    N+ I+ +Q          +CLTGNP+  CW+C
Sbjct: 23   TLNLNLTLPHQHPNPEVVVDEVQRRL--NVSISRRQVLSVQENDGSSCLTGNPVDDCWRC 80

Query: 1018 DPNWGNDRQHLADCARXXXXXXXXXXXGQLYVVIDPSDKNLINPKPGTLRHALIQSKPLW 839
            DPNW N+RQ LADC             GQ YVV D SD++ INP PGTLRHA+IQ++PLW
Sbjct: 81   DPNWQNNRQRLADCGIGFGLDAMGGKGGQFYVVTDSSDEDPINPAPGTLRHAVIQTQPLW 140

Query: 838  IIFSDNMKIKLSGQLYVGSFKTIDGRGADVRITGKGCLMLEDVTNIIIHDIGISNCDPAD 659
            I FS NM IKL  +L V SFKTIDGRGA+V ITG+GC+ L+ V+N+IIH + + +C P+ 
Sbjct: 141  ITFSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHGVHVHHCVPSG 200

Query: 658  SAYINISETQVKHAGKAKGNGITIIRSHNIWVDTCTISDCSYELIDATLLSTALTFSNNL 479
            +A I  S T V   GK+ G+GI+I  S  IW+D C++S C   LIDA + ST +T SNN 
Sbjct: 201  NADIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMGSTGITISNNY 260

Query: 478  YFNKSELLL----DRQDNNGLKQVTTVYNRYGKHLTQ-IPPSRRNXXXXXXXXXXXGEEV 314
            + +  E++L    D+   +   QVT  +N +G+ L Q +P  RR             E  
Sbjct: 261  FSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTQWEMY 320

Query: 313  SDGQNGDRGTNTSGKDF 263
            + G + +   N+ G  +
Sbjct: 321  AIGGSANPTINSQGNRY 337


>ref|XP_002311060.1| predicted protein [Populus trichocarpa] gi|222850880|gb|EEE88427.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  231 bits (589), Expect = 3e-58
 Identities = 131/292 (44%), Positives = 174/292 (59%), Gaps = 5/292 (1%)
 Frame = -3

Query: 1123 VVNDRLQRITSNNLGINYKQQACLTGNPIFQCWKCDPNWGNDRQHLADCARXXXXXXXXX 944
            +VN  L R   N L I  K Q C TGNPI  CW+CDPNW N+RQ LADCA          
Sbjct: 54   LVNASLSR--RNLLSIQEKDQ-CQTGNPIDDCWRCDPNWANNRQRLADCAIGFGQGTLGG 110

Query: 943  XXGQLYVVIDPSDKNLINPKPGTLRHALIQSKPLWIIFSDNMKIKLSGQLYVGSFKTIDG 764
              GQ+YVV D SD N  NP PGTLR+A+IQ +PLWIIFS +M IKL  +L   S+KTIDG
Sbjct: 111  RGGQIYVVTDSSDHNPANPTPGTLRYAVIQDQPLWIIFSSDMVIKLKHELIFNSYKTIDG 170

Query: 763  RGADVRITGKGCLMLEDVTNIIIHDIGISNCDPADSAYINISETQVKHAGKAKGNGITII 584
            RGA+V ITG GC+ L+ VT+IIIH+I + +C P+ +  I  S T V   G++ G+GI+I 
Sbjct: 171  RGANVHITGNGCITLQHVTHIIIHNIHVHHCKPSGNTNIASSPTHVGQRGESDGDGISIS 230

Query: 583  RSHNIWVDTCTISDCSYELIDATLLSTALTFSNNLYFNKSELLL----DRQDNNGLKQVT 416
             S  IW+D C++S C+  LIDA L STA+T SNN + + +E++L    D+   +   QVT
Sbjct: 231  GSQKIWIDHCSLSYCTDGLIDAILGSTAITISNNHFTHHNEVMLLGHNDKYVLDSGMQVT 290

Query: 415  TVYNRYGKHLTQ-IPPSRRNXXXXXXXXXXXGEEVSDGQNGDRGTNTSGKDF 263
              +N +G  L Q +P  RR             E  + G + +   N+ G  +
Sbjct: 291  IAFNHFGVGLVQRMPRCRRGYIHVVNNDFTAWEMYAIGGSANPTINSQGNRY 342


>ref|XP_003541430.1| PREDICTED: probable pectate lyase 12-like [Glycine max]
          Length = 477

 Score =  228 bits (581), Expect = 2e-57
 Identities = 120/280 (42%), Positives = 173/280 (61%), Gaps = 6/280 (2%)
 Frame = -3

Query: 1084 LGINYKQQA-CLTGNPIFQCWKCDPNWGNDRQHLADCARXXXXXXXXXXXGQLYVVIDPS 908
            LG++ K+ A CLTGNPI  CWKCDP+W N+RQ LADCA            GQ Y+V D S
Sbjct: 56   LGVSEKEVASCLTGNPIDDCWKCDPDWANNRQRLADCAIGFGQNAKGGKGGQFYIVTDSS 115

Query: 907  DKNLINPKPGTLRHALIQSKPLWIIFSDNMKIKLSGQLYVGSFKTIDGRGADVRITGKGC 728
            D++ +NPKPGTLR+A+IQ++PLWI+F  NM IKLS +L   S+KTIDGRGADV I G GC
Sbjct: 116  DEDPVNPKPGTLRYAVIQNEPLWIVFPSNMMIKLSQELIFNSYKTIDGRGADVHIVGGGC 175

Query: 727  LMLEDVTNIIIHDIGISNCDPADSAYINISETQVKHAGKAKGNGITIIRSHNIWVDTCTI 548
            + L+ ++N+IIH+I I +C P+ +A +  S     +  ++ G+GI+I  S +IW+D CT+
Sbjct: 176  ITLQYISNVIIHNIHIHHCHPSGNANVRSSPEHYGYRTESDGDGISIFGSRDIWIDHCTL 235

Query: 547  SDCSYELIDATLLSTALTFSNNLYFNKSELLLDRQDNNGL----KQVTTVYNRYGKHLTQ 380
            S C   LIDA + S+A+T SNN + + ++++L    ++ L     QVT  +N +G+ L Q
Sbjct: 236  SRCKDGLIDAVMGSSAITISNNHFSHHNDVMLLGHSDHYLPDSGMQVTIGFNHFGEGLVQ 295

Query: 379  -IPPSRRNXXXXXXXXXXXGEEVSDGQNGDRGTNTSGKDF 263
             +P  RR             E  + G +     N+ G  +
Sbjct: 296  RMPRCRRGYIHVVNNDFTRWEMYAIGGSAGPTINSQGNRY 335


>ref|NP_196051.2| pectate lyase family protein [Arabidopsis thaliana]
            gi|332003342|gb|AED90725.1| pectate lyase family protein
            [Arabidopsis thaliana]
          Length = 518

 Score =  226 bits (576), Expect = 9e-57
 Identities = 110/238 (46%), Positives = 155/238 (65%), Gaps = 4/238 (1%)
 Frame = -3

Query: 1060 ACLTGNPIFQCWKCDPNWGNDRQHLADCARXXXXXXXXXXXGQLYVVIDPSDKNLINPKP 881
            +C+TGNPI  CW+CDPNW  +RQ LADC+            GQ Y+V D SD +  NP P
Sbjct: 90   SCITGNPIDDCWRCDPNWSANRQRLADCSIGFGQGTLGGKGGQFYLVTDSSDNDAANPIP 149

Query: 880  GTLRHALIQSKPLWIIFSDNMKIKLSGQLYVGSFKTIDGRGADVRITGKGCLMLEDVTNI 701
            GTLRHA+IQ +PLWIIFS +M IKL  +L +GS+KTIDGRG +++ITG GCL ++ V+++
Sbjct: 150  GTLRHAVIQPEPLWIIFSSDMGIKLKHELIIGSYKTIDGRGTNIQITGHGCLTIQQVSHV 209

Query: 700  IIHDIGISNCDPADSAYINISETQVKHAGKAKGNGITIIRSHNIWVDTCTISDCSYELID 521
            IIH++ I +C P+ +  +  S T V   G + G+GI++  SH+IWVD C++  C+  LID
Sbjct: 210  IIHNVHIHHCKPSGNTLVASSPTHVGFRGVSDGDGISVSASHHIWVDHCSLGYCADGLID 269

Query: 520  ATLLSTALTFSNNLYFNKSELLL----DRQDNNGLKQVTTVYNRYGKHLTQIPPSRRN 359
              L STA+T SNN + +  E++L    DR   +   QVT  +N +G+ L Q  P  R+
Sbjct: 270  VILASTAVTISNNYFSHHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRH 327


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