BLASTX nr result

ID: Cnidium21_contig00013258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013258
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...    88   8e-16
ref|XP_004155832.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...    84   1e-14
ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [...    84   1e-14
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...    83   3e-14
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...    82   6e-14

>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/82 (50%), Positives = 52/82 (63%)
 Frame = +3

Query: 3    QLMLKGAIQYYGFTHEVRTEARKVHDLFFDLLKVTLPEIDFREARXXXXXXXXXXXXXXX 182
            Q MLK A+ +YGF+HEVRTEARKVHDLFFD+LK+  P+ DFR+AR               
Sbjct: 2001 QFMLKSAMHFYGFSHEVRTEARKVHDLFFDILKIAFPDTDFRDARSALSFSSQATASTVT 2060

Query: 183  XXRQILAGQGKRQKQTNEVDLD 248
              RQ+  GQ KR K  NE++ +
Sbjct: 2061 SPRQVAVGQSKRHKLINEMETE 2082


>ref|XP_004155832.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase BRM-like
            [Cucumis sativus]
          Length = 2251

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/82 (52%), Positives = 54/82 (65%)
 Frame = +3

Query: 3    QLMLKGAIQYYGFTHEVRTEARKVHDLFFDLLKVTLPEIDFREARXXXXXXXXXXXXXXX 182
            Q MLKGA+Q+YGF+HEVR EA+KVHDLFFD+LK+  P+ DFREAR               
Sbjct: 2025 QFMLKGAMQFYGFSHEVRFEAKKVHDLFFDILKIAFPDTDFREAR-NALSFQSPGSSAAA 2083

Query: 183  XXRQILAGQGKRQKQTNEVDLD 248
              R+  AGQ KRQK  +++D D
Sbjct: 2084 TMRERPAGQIKRQKMVHDMDTD 2105


>ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [Cucumis sativus]
          Length = 2247

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/82 (52%), Positives = 54/82 (65%)
 Frame = +3

Query: 3    QLMLKGAIQYYGFTHEVRTEARKVHDLFFDLLKVTLPEIDFREARXXXXXXXXXXXXXXX 182
            Q MLKGA+Q+YGF+HEVR EA+KVHDLFFD+LK+  P+ DFREAR               
Sbjct: 2021 QFMLKGAMQFYGFSHEVRFEAKKVHDLFFDILKIAFPDTDFREAR-NALSFQSPGSSAAA 2079

Query: 183  XXRQILAGQGKRQKQTNEVDLD 248
              R+  AGQ KRQK  +++D D
Sbjct: 2080 TMRERPAGQIKRQKMVHDMDTD 2101


>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222843090|gb|EEE80637.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2222

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3    QLMLKGAIQYYGFTHEVRTEARKVHDLFFDLLKVTLPEIDFREAR-XXXXXXXXXXXXXX 179
            Q MLKGA+Q+YGF+HEVRTEARKVHDLFFD+LK+  P+ DFREAR               
Sbjct: 1993 QFMLKGAMQFYGFSHEVRTEARKVHDLFFDILKIAFPDTDFREARDTFSFSGPSSTSISA 2052

Query: 180  XXXRQILAGQGKRQKQTNEVDLD 248
               +Q   G  KR K  N+V+ D
Sbjct: 2053 PSPKQAALGLIKRHKSINDVEPD 2075


>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3    QLMLKGAIQYYGFTHEVRTEARKVHDLFFDLLKVTLPEIDFREAR-XXXXXXXXXXXXXX 179
            Q MLKGA+Q+Y F+HE R+EARKVHDLFFD+LK+  P+ DFREAR               
Sbjct: 2015 QFMLKGAMQFYTFSHEARSEARKVHDLFFDILKIAFPDTDFREARNALSFSNPLSTSSSA 2074

Query: 180  XXXRQILAGQGKRQKQTNEVDLD 248
               RQ   GQ KR +  NEV+ D
Sbjct: 2075 PSPRQAAVGQSKRHRLINEVEPD 2097


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