BLASTX nr result

ID: Cnidium21_contig00013230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013230
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172081.1| PREDICTED: probable E3 ubiquitin-protein lig...   123   4e-26
ref|XP_004138892.1| PREDICTED: probable E3 ubiquitin-protein lig...   123   4e-26
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...   117   2e-24
emb|CBI38350.3| unnamed protein product [Vitis vinifera]              117   2e-24
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]   117   2e-24

>ref|XP_004172081.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Cucumis
           sativus]
          Length = 194

 Score =  123 bits (309), Expect = 4e-26
 Identities = 68/120 (56%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   AEKELQNYLG--DGTSEDFNGFRTKLAGLTSVTRNYFENLVRALENGLSDVNSIGASSKT 176
           AEKEL  YL   DG S+DFN FRTKLAGLTSVTRNYFENLVRALENGLSDV+S+G  SKT
Sbjct: 76  AEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSLGTCSKT 135

Query: 177 TSSKCVAXXXXXXXXXXXXPFRIXXXXXXXXXXXXWACDHCTYLNPSRSAIACQMCSQRR 356
           +SSK                FR             W+C+HCT+ N  +SA  CQMC QRR
Sbjct: 136 SSSKSTGGCRSKGGKGKMSAFRGSGSSRNIDDTDHWSCEHCTFAN-VKSATFCQMCQQRR 194


>ref|XP_004138892.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Cucumis
           sativus]
          Length = 597

 Score =  123 bits (309), Expect = 4e-26
 Identities = 68/120 (56%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   AEKELQNYLG--DGTSEDFNGFRTKLAGLTSVTRNYFENLVRALENGLSDVNSIGASSKT 176
           AEKEL  YL   DG S+DFN FRTKLAGLTSVTRNYFENLVRALENGLSDV+S+G  SKT
Sbjct: 479 AEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSLGTCSKT 538

Query: 177 TSSKCVAXXXXXXXXXXXXPFRIXXXXXXXXXXXXWACDHCTYLNPSRSAIACQMCSQRR 356
           +SSK                FR             W+C+HCT+ N  +SA  CQMC QRR
Sbjct: 539 SSSKSTGGCRSKGGKGKMSAFRGSGSSRNIDDTDHWSCEHCTFAN-VKSATFCQMCQQRR 597


>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score =  117 bits (294), Expect = 2e-24
 Identities = 68/121 (56%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
 Frame = +3

Query: 3   AEKELQNYL-GDGTSEDFNGFRTKLAGLTSVTRNYFENLVRALENGLSDVNSIGASSKTT 179
           AEKELQ YL  DG S+DFN FRTKLAGLTSVTRNYFENLVRALENGLSDV+S GA S+T 
Sbjct: 533 AEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTA 592

Query: 180 SSKCV--AXXXXXXXXXXXXPFRIXXXXXXXXXXXXWACDHCTYLNPSRSAIACQMCSQR 353
           SSK +                 R             W+C+HCT+ N  RSA  CQ+C QR
Sbjct: 593 SSKSLGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFAN-VRSATICQICQQR 651

Query: 354 R 356
           R
Sbjct: 652 R 652


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  117 bits (294), Expect = 2e-24
 Identities = 68/121 (56%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
 Frame = +3

Query: 3   AEKELQNYL-GDGTSEDFNGFRTKLAGLTSVTRNYFENLVRALENGLSDVNSIGASSKTT 179
           AEKELQ YL  DG S+DFN FRTKLAGLTSVTRNYFENLVRALENGLSDV+S GA S+T 
Sbjct: 462 AEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTA 521

Query: 180 SSKCV--AXXXXXXXXXXXXPFRIXXXXXXXXXXXXWACDHCTYLNPSRSAIACQMCSQR 353
           SSK +                 R             W+C+HCT+ N  RSA  CQ+C QR
Sbjct: 522 SSKSLGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFAN-VRSATICQICQQR 580

Query: 354 R 356
           R
Sbjct: 581 R 581


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score =  117 bits (294), Expect = 2e-24
 Identities = 68/121 (56%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
 Frame = +3

Query: 3   AEKELQNYL-GDGTSEDFNGFRTKLAGLTSVTRNYFENLVRALENGLSDVNSIGASSKTT 179
           AEKELQ YL  DG S+DFN FRTKLAGLTSVTRNYFENLVRALENGLSDV+S GA S+T 
Sbjct: 469 AEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTA 528

Query: 180 SSKCV--AXXXXXXXXXXXXPFRIXXXXXXXXXXXXWACDHCTYLNPSRSAIACQMCSQR 353
           SSK +                 R             W+C+HCT+ N  RSA  CQ+C QR
Sbjct: 529 SSKSLGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFAN-VRSATICQICQQR 587

Query: 354 R 356
           R
Sbjct: 588 R 588


Top