BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013190
         (1347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   426   e-117
ref|XP_002509740.1| cleavage and polyadenylation specificity fac...   426   e-117
ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   421   e-115
ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   415   e-113
ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   412   e-112

>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
            [Vitis vinifera]
          Length = 383

 Score =  426 bits (1096), Expect = e-117
 Identities = 204/345 (59%), Positives = 244/345 (70%), Gaps = 14/345 (4%)
 Frame = +2

Query: 152  RQQSLREASRFLRRSTGRRMLTNPSMLVRETAAEELEERQSDWAYSRPVVVLDLLWNXXX 331
            R+QSLREA+RFLRR++ RRM+  PSMLVRETAAE+LEERQSDWAYS+PVVVLD++WN   
Sbjct: 39   RRQSLREAARFLRRASSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAF 98

Query: 332  XXXXXXXXXXSREERPETPLRVWVVGYAVQCGVHMVCVCLXXXXXXXXXXXXXXXXXXX- 508
                      SR E P  PLR W+VGYA+QC +H+VCV +                    
Sbjct: 99   VVVAAAVLVLSRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIG 158

Query: 509  -------------ARYVTLARLTERVPSSVVKNLESANTMFSFVWWIIGFYWVSPDGQAL 649
                         ++YVTLA L +   +SV K+LESANTMFSF+WWIIGFYWVS  GQAL
Sbjct: 159  SGGSYSSSPQGDSSQYVTLASLGDESSTSVAKHLESANTMFSFIWWIIGFYWVSAGGQAL 218

Query: 650  IEQSPQLYWLCIIXXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAVLYAVVDQEGATRED 829
               SPQLYWLCII                  IGIAVCCCLPCIIA+LYAV DQEGA++ED
Sbjct: 219  ARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKED 278

Query: 830  IEKLLKYKFRRLAGTEKPNGEIQGPSGGVMTECGTDSPTERILAAEDLDCCICLAAYDDG 1009
            I++L ++KFR++   EK +G+IQG  GG+MTECGTD+PTE +L+ ED +CCICL+AYDDG
Sbjct: 279  IDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDG 338

Query: 1010 AELRELPCGHHFHCACIDKWLHINATCPLCKYDILKQSHNGIEEV 1144
             ELRELPCGHHFHC C+DKWL+INATCPLCKY+ILK S NG EEV
Sbjct: 339  VELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSSNGREEV 383


>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223549639|gb|EEF51127.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 383

 Score =  426 bits (1095), Expect = e-117
 Identities = 211/345 (61%), Positives = 243/345 (70%), Gaps = 14/345 (4%)
 Frame = +2

Query: 152  RQQSLREASRFLRRSTGRRMLTNPSMLVRETAAEELEERQSDWAYSRPVVVLDLLWNXXX 331
            R+QSLREA+RFLRR++ RRM+  PSMLVRETAAE+LEERQSDWAYS+PVV+LD+LWN   
Sbjct: 39   RRQSLREAARFLRRASSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVILDILWNFAF 98

Query: 332  XXXXXXXXXXSREERPETPLRVWVVGYAVQCGVHMVCVCLXXXXXXXXXXXXXXXXXXXA 511
                      SR+E P  PLR+W+VGY +QC +HMVCVC+                    
Sbjct: 99   VAVAIGVLIMSRKEDPSMPLRLWIVGYGLQCVLHMVCVCVEYRRRRRRRRRVGFGIGSDG 158

Query: 512  R-----------YVTLARLTERV-PSSVVKNLESANTMFSFVWWIIGFYWVSPDGQALIE 655
                        YVTLA+L +    SSV K+LESANTMFSF+WWIIGFYWVS  GQAL  
Sbjct: 159  NLSSGSRGDSGEYVTLAQLEDHDGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALSH 218

Query: 656  QSPQLYWLCIIXXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAVLYAVVDQEGATREDIE 835
             SPQLYWLCII                  IGIAVCCCLPCIIA+LYAV DQEGA++EDIE
Sbjct: 219  NSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVADQEGASKEDIE 278

Query: 836  KLLKYKFRRLAGTEK--PNGEIQGPSGGVMTECGTDSPTERILAAEDLDCCICLAAYDDG 1009
            +L K+KFRR+   EK   NG+ QGP GGVMTECGTDSP E IL+ ED +CCICL+AYDDG
Sbjct: 279  QLSKFKFRRVDNDEKLTGNGDEQGPLGGVMTECGTDSPVEHILSEEDAECCICLSAYDDG 338

Query: 1010 AELRELPCGHHFHCACIDKWLHINATCPLCKYDILKQSHNGIEEV 1144
             ELRELPCGHHFHCAC+DKWL+INATCPLCKY+ILK S    EEV
Sbjct: 339  VELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSRDREEV 383


>ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
            [Vitis vinifera]
          Length = 392

 Score =  421 bits (1082), Expect = e-115
 Identities = 205/354 (57%), Positives = 245/354 (69%), Gaps = 23/354 (6%)
 Frame = +2

Query: 152  RQQSLREASRFLRRSTGRRMLTNPSMLVRETAAEELEERQSDWAYSRPVVVLDLLWNXXX 331
            R+QSLREA+RFLRR++ RRM+  PSMLVRETAAE+LEERQSDWAYS+PVVVLD++WN   
Sbjct: 39   RRQSLREAARFLRRASSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAF 98

Query: 332  XXXXXXXXXXSREERPETPLRVWVVGYAVQCGVHMVCVCLXXXXXXXXXXXXXXXXXXX- 508
                      SR E P  PLR W+VGYA+QC +H+VCV +                    
Sbjct: 99   VVVAAAVLVLSRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIG 158

Query: 509  -------------ARYVTLARLTER---------VPSSVVKNLESANTMFSFVWWIIGFY 622
                         ++YVTLA + E          + SSV K+LESANTMFSF+WWIIGFY
Sbjct: 159  SGGSYSSSPQGDSSQYVTLANVDEHHSQTCQFLSLLSSVAKHLESANTMFSFIWWIIGFY 218

Query: 623  WVSPDGQALIEQSPQLYWLCIIXXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAVLYAVV 802
            WVS  GQAL   SPQLYWLCII                  IGIAVCCCLPCIIA+LYAV 
Sbjct: 219  WVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVA 278

Query: 803  DQEGATREDIEKLLKYKFRRLAGTEKPNGEIQGPSGGVMTECGTDSPTERILAAEDLDCC 982
            DQEGA++EDI++L ++KFR++   EK +G+IQG  GG+MTECGTD+PTE +L+ ED +CC
Sbjct: 279  DQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECC 338

Query: 983  ICLAAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKYDILKQSHNGIEEV 1144
            ICL+AYDDG ELRELPCGHHFHC C+DKWL+INATCPLCKY+ILK S NG EEV
Sbjct: 339  ICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSSNGREEV 392


>ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
            [Vitis vinifera]
          Length = 372

 Score =  415 bits (1067), Expect = e-113
 Identities = 198/334 (59%), Positives = 238/334 (71%), Gaps = 3/334 (0%)
 Frame = +2

Query: 152  RQQSLREASRFLRRSTGRRMLTNPSMLVRETAAEELEERQSDWAYSRPVVVLDLLWNXXX 331
            R+QSLREA+RFLRR++ RRM+  PSMLVRETAAE+LEERQSDWAYS+PVVVLD++WN   
Sbjct: 39   RRQSLREAARFLRRASSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAF 98

Query: 332  XXXXXXXXXXSREERPETPLRVWVVGYAVQCGVHMVCVCLXXXXXXXXXXXXXXXXXXXA 511
                      SR E P  PLR W+VGYA+QC +H+VCV +                    
Sbjct: 99   VVVAAAVLVLSRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIG 158

Query: 512  RYVTLARLTERVPS---SVVKNLESANTMFSFVWWIIGFYWVSPDGQALIEQSPQLYWLC 682
               + +   +   S   +V K+LESANTMFSF+WWIIGFYWVS  GQAL   SPQLYWLC
Sbjct: 159  SGGSYSSSPQGDSSQYVTVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLC 218

Query: 683  IIXXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAVLYAVVDQEGATREDIEKLLKYKFRR 862
            II                  IGIAVCCCLPCIIA+LYAV DQEGA++EDI++L ++KFR+
Sbjct: 219  IIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRK 278

Query: 863  LAGTEKPNGEIQGPSGGVMTECGTDSPTERILAAEDLDCCICLAAYDDGAELRELPCGHH 1042
            +   EK +G+IQG  GG+MTECGTD+PTE +L+ ED +CCICL+AYDDG ELRELPCGHH
Sbjct: 279  VGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHH 338

Query: 1043 FHCACIDKWLHINATCPLCKYDILKQSHNGIEEV 1144
            FHC C+DKWL+INATCPLCKY+ILK S NG EEV
Sbjct: 339  FHCTCVDKWLYINATCPLCKYNILKSSSNGREEV 372


>ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 385

 Score =  412 bits (1058), Expect = e-112
 Identities = 202/351 (57%), Positives = 239/351 (68%), Gaps = 20/351 (5%)
 Frame = +2

Query: 152  RQQSLREASRFLRRSTGRRMLTNPSMLVRETAAEELEERQSDWAYSRPVVVLDLLWNXXX 331
            R+Q LR+A+RFLRR++GRRM+  PSMLVRE AAE+LEERQSDWAYS+PVVVLD++WN   
Sbjct: 36   RRQRLRQAARFLRRASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAF 95

Query: 332  XXXXXXXXXXSREERPETPLRVWVVGYAVQCGVHMVCVCLXXXXXXXXXXXXXXXXXXX- 508
                      S  E P  PLR+W+VGYA+QC +HMVCVC+                    
Sbjct: 96   VVVAGAVLVLSASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRV 155

Query: 509  -------------------ARYVTLARLTERVPSSVVKNLESANTMFSFVWWIIGFYWVS 631
                               A+YV+L +L +   +SV K+LESANTMFSFVWWIIGFYWVS
Sbjct: 156  GSSSGNLSVSSREGSASGSAQYVSLGQLDDE-GTSVAKHLESANTMFSFVWWIIGFYWVS 214

Query: 632  PDGQALIEQSPQLYWLCIIXXXXXXXXXXXXXXXXXXIGIAVCCCLPCIIAVLYAVVDQE 811
              GQAL + SPQLYWLCII                  IGIAVCCCLPCIIA+LYAV DQE
Sbjct: 215  AGGQALAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQE 274

Query: 812  GATREDIEKLLKYKFRRLAGTEKPNGEIQGPSGGVMTECGTDSPTERILAAEDLDCCICL 991
            GA++EDIE+L K+KFRR+   EK  G IQGP GG+MTEC  DSP E +LA ED +CCICL
Sbjct: 275  GASKEDIEQLSKFKFRRIESNEKLTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICL 334

Query: 992  AAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKYDILKQSHNGIEEV 1144
            ++YDDG ELRELPCGHHFHC C+DKWL+INATCPLCKY+ILK +    EEV
Sbjct: 335  SSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSNTLSQEEV 385