BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013144
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]          94   9e-18
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    93   2e-17
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              93   2e-17
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...    93   2e-17
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]          93   2e-17

>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/101 (43%), Positives = 66/101 (65%)
 Frame = +2

Query: 47  FFPQCHFVVEYMRLLADIGSAMFLTCKGDEEGKKNIWYLDSGAINHTCGHKDLFTEIDDT 226
           F  + H+V E ++   +    +  + K DE+ + + WYLDSGA NH CG K +F E+D++
Sbjct: 302 FEEKAHYVEEKIQ---EEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDES 358

Query: 227 ISGEVTFGDSSKIPVKGKGTIMIVLKKSDKKYINDVYYIPA 349
           + G V  GD SK+ VKGKG I+I LK  D ++I++VYYIP+
Sbjct: 359 VRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPS 399


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = +2

Query: 125 KGDEEGKKNIWYLDSGAINHTCGHKDLFTEIDDTISGEVTFGDSSKIPVKGKGTIMIVLK 304
           K DE+ + + WYLDSGA NH CG K +F E+D+++ G V  GD SK+ VKGKG I+I LK
Sbjct: 325 KKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLK 384

Query: 305 KSDKKYINDVYYIPA 349
             D ++I++VYYIP+
Sbjct: 385 NGDHQFISNVYYIPS 399


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = +2

Query: 125 KGDEEGKKNIWYLDSGAINHTCGHKDLFTEIDDTISGEVTFGDSSKIPVKGKGTIMIVLK 304
           K DE+ + + WYLDSGA NH CG K +F E+D+++ G V  GD SK+ VKGKG I+I LK
Sbjct: 287 KKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLK 346

Query: 305 KSDKKYINDVYYIPA 349
             D ++I++VYYIP+
Sbjct: 347 NGDHQFISNVYYIPS 361


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = +2

Query: 125 KGDEEGKKNIWYLDSGAINHTCGHKDLFTEIDDTISGEVTFGDSSKIPVKGKGTIMIVLK 304
           K DE+ + + WYLDSGA NH CG K +F E+D+++ G V  GD SK+ VKGKG I+I LK
Sbjct: 325 KKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLK 384

Query: 305 KSDKKYINDVYYIPA 349
             D ++I++VYYIP+
Sbjct: 385 NGDHQFISNVYYIPS 399


>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = +2

Query: 125 KGDEEGKKNIWYLDSGAINHTCGHKDLFTEIDDTISGEVTFGDSSKIPVKGKGTIMIVLK 304
           K DE+ + + WYLDSGA NH CG K +F E+D+++ G V  GD SK+ VKGKG I+I LK
Sbjct: 341 KKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLK 400

Query: 305 KSDKKYINDVYYIPA 349
             D ++I++VYYIP+
Sbjct: 401 NGDHQFISNVYYIPS 415