BLASTX nr result

ID: Cnidium21_contig00013127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013127
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314163.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003606714.1| Two-component response regulator ARR1 [Medic...   113   1e-23
emb|CBI16094.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002299857.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_003537977.1| PREDICTED: putative two-component response r...   107   1e-21

>ref|XP_002314163.1| predicted protein [Populus trichocarpa] gi|222850571|gb|EEE88118.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/114 (58%), Positives = 80/114 (70%), Gaps = 10/114 (8%)
 Frame = +1

Query: 1   SAFSISPEPYRTAGDVTRASEITLSSLRGQYSKLVTN-FNSIDNS-------MCVEFD-- 150
           SAFSI PEP+RT  DV RA + TLS+LRGQ + L +N F S + +       + V+ D  
Sbjct: 53  SAFSIFPEPHRTPLDVNRACQTTLSNLRGQLNALSSNNFKSFNETTGQTHDPIVVDLDNK 112

Query: 151 VDETDRTGTDSKKSETMKRQRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMN 312
               DR G+ S+  +T+KR RLVWTPQLHKRFVDVV HLGIKNAVPKTIMQLMN
Sbjct: 113 TGAVDRDGSGSEARKTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMN 166


>ref|XP_003606714.1| Two-component response regulator ARR1 [Medicago truncatula]
           gi|357472893|ref|XP_003606731.1| Two-component response
           regulator ARR1 [Medicago truncatula]
           gi|355507769|gb|AES88911.1| Two-component response
           regulator ARR1 [Medicago truncatula]
           gi|355507786|gb|AES88928.1| Two-component response
           regulator ARR1 [Medicago truncatula]
          Length = 312

 Score =  113 bits (283), Expect = 1e-23
 Identities = 67/128 (52%), Positives = 77/128 (60%), Gaps = 24/128 (18%)
 Frame = +1

Query: 1   SAFSISPEPYRTAGDVTRASEITLSSLRGQYSKLVTNFNSIDNSMCVEFDVDET---DRT 171
           SAFSISPEP+RT  DV RAS  TLS LR     +    N   +    + + DE    D +
Sbjct: 39  SAFSISPEPHRTLFDVNRASRNTLSLLRSNSGTITNQINQTMSCEIEDIEEDEEPDRDGS 98

Query: 172 GTDSKK---------------------SETMKRQRLVWTPQLHKRFVDVVAHLGIKNAVP 288
           G+DS+K                     +ET+KR RLVWTPQLHKRFVDVVAHLGIKNAVP
Sbjct: 99  GSDSRKHRKIDSVIEEVEAEADSAVRTTETIKRPRLVWTPQLHKRFVDVVAHLGIKNAVP 158

Query: 289 KTIMQLMN 312
           KTIMQLMN
Sbjct: 159 KTIMQLMN 166


>emb|CBI16094.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/108 (57%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
 Frame = +1

Query: 1   SAFSISPEPYRTAGDVTRASEITLSSLRGQYSKLVTN----FNSIDNSMCVEFDVDETDR 168
           SAFSI+PEP RT  +V RAS+ T S++RGQ     +N    FN   N    E D      
Sbjct: 159 SAFSITPEPCRTLLEVNRASQSTFSTIRGQSHSFSSNNFKSFNEERNREPAEADSAMRTE 218

Query: 169 TGTDSKKSETMKRQRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMN 312
              D   + T+KR RLVWTPQLHKRFVDVV HLGIKNAVPKTIMQLMN
Sbjct: 219 NSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMN 266


>ref|XP_002299857.1| predicted protein [Populus trichocarpa] gi|222847115|gb|EEE84662.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  108 bits (269), Expect = 6e-22
 Identities = 63/111 (56%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
 Frame = +1

Query: 1   SAFSISPEPYRTAGDVTRASEITLSSLRGQYSKLVTN----FNSI---DNSMCVEFDVDE 159
           SAF+ISPEP+RT  DV RAS+ TLS+L G  + L +N    FN     D+++  E  VD+
Sbjct: 32  SAFNISPEPHRTPLDVNRASQNTLSNLHGHLNALSSNNFKSFNETTEADSALRTENWVDD 91

Query: 160 TDRTGTDSKKSETMKRQRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMN 312
                  S  + T+KR RLVWTPQLHKRFVDVV HLG+KNAVPKTIMQ MN
Sbjct: 92  PS-----SAAARTLKRPRLVWTPQLHKRFVDVVGHLGMKNAVPKTIMQWMN 137


>ref|XP_003537977.1| PREDICTED: putative two-component response regulator ARR21-like
           [Glycine max]
          Length = 323

 Score =  107 bits (267), Expect = 1e-21
 Identities = 68/138 (49%), Positives = 78/138 (56%), Gaps = 34/138 (24%)
 Frame = +1

Query: 1   SAFSISPEPYRTAGDVTRASEITLSSLRGQYSKLVTNFNSIDNSMCV-----------EF 147
           SAFSI PEP+RT  DV RAS  TLS+LRG    +   F+S +N+              E 
Sbjct: 42  SAFSILPEPHRTLLDVNRASRNTLSTLRGGGGSVHQAFSSSNNNHNYDGDGDGGVEEEED 101

Query: 148 DVDETDRTGTDSKKSE-----------------------TMKRQRLVWTPQLHKRFVDVV 258
           D D+ D +G DS+K                          +KR RLVWTPQLHKRFVDVV
Sbjct: 102 DDDDRDGSGPDSRKQRKIDCGAAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDVV 161

Query: 259 AHLGIKNAVPKTIMQLMN 312
           AHLGIKNAVPKTIMQLMN
Sbjct: 162 AHLGIKNAVPKTIMQLMN 179


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