BLASTX nr result

ID: Cnidium21_contig00013115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013115
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307419.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-89
ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-88
ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago tr...   292   4e-87
emb|CBI19072.3| unnamed protein product [Vitis vinifera]              301   6e-87
ref|XP_002285834.1| PREDICTED: biotin--protein ligase [Vitis vin...   301   6e-87

>ref|XP_002307419.1| predicted protein [Populus trichocarpa] gi|222856868|gb|EEE94415.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  301 bits (770), Expect(2) = 2e-89
 Identities = 138/182 (75%), Positives = 163/182 (89%)
 Frame = -1

Query: 1159 YMNSLSTKCFGRFFIWSPRLPSTHDVVTKNFGELPVGSVCVADVQYKGRGRSMNVWESPK 980
            +MNSLST  FGR  IWSP LPSTHD+V+ NFGELP+G+VC+ADVQYKGRGRS NVWESP 
Sbjct: 64   FMNSLSTNLFGRLLIWSPLLPSTHDLVSNNFGELPIGTVCIADVQYKGRGRSKNVWESPA 123

Query: 979  GCLLFSFTIQMADGRIVPLVQYVVSLAMTEAIHDVCTKDGVPYLDVRIKWPNDLYLDGLK 800
            GCL+FSFTIQM DG++VPL+QYVVSLA+TEAI D+C K+G+P++DVRIKWPNDLYL+G+K
Sbjct: 124  GCLMFSFTIQMEDGQVVPLLQYVVSLAVTEAIKDLCDKNGLPHIDVRIKWPNDLYLNGVK 183

Query: 799  VGGILCTSTYRSKKFNVSAGLGLNVDNEKPTTSLNAVLRKLTSVSYQLQREDIISVFFNK 620
            VGGILCTSTYRSKKFN+SAG+GLNVDNEKPTT LNAVLR+L   +  L+REDI++ F NK
Sbjct: 184  VGGILCTSTYRSKKFNISAGIGLNVDNEKPTTCLNAVLRELAGAACALRREDIVAAFLNK 243

Query: 619  FE 614
            FE
Sbjct: 244  FE 245



 Score = 56.2 bits (134), Expect(2) = 2e-89
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = -2

Query: 507 GFKPLEELYYKTWLHSGQRVIVEEKNDDKDQGRQSVVTV 391
           GF+ LEELYYKTWLHSGQRVI++EKN+  +Q  ++VVT+
Sbjct: 255 GFQTLEELYYKTWLHSGQRVIIQEKNE--NQVVENVVTI 291


>ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|222842736|gb|EEE80283.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  298 bits (763), Expect(2) = 1e-88
 Identities = 141/182 (77%), Positives = 162/182 (89%)
 Frame = -1

Query: 1159 YMNSLSTKCFGRFFIWSPRLPSTHDVVTKNFGELPVGSVCVADVQYKGRGRSMNVWESPK 980
            +MNSLST  FGR  IWSP LPSTHDVV+ NFGELP+G+VCVADVQYKGRGRS NVWESP 
Sbjct: 66   FMNSLSTNQFGRLLIWSPILPSTHDVVSNNFGELPIGTVCVADVQYKGRGRSKNVWESPA 125

Query: 979  GCLLFSFTIQMADGRIVPLVQYVVSLAMTEAIHDVCTKDGVPYLDVRIKWPNDLYLDGLK 800
            GCL+FSFTIQM DGR+VPL+QYVVSLA+TEAI DVC K+G+P +DVRIKWPNDLYL+GLK
Sbjct: 126  GCLMFSFTIQMEDGRVVPLLQYVVSLAVTEAIKDVCDKNGLPRIDVRIKWPNDLYLNGLK 185

Query: 799  VGGILCTSTYRSKKFNVSAGLGLNVDNEKPTTSLNAVLRKLTSVSYQLQREDIISVFFNK 620
            VGGIL TSTY+SKKFNVS G+GLNVDNEKPTT LNAVLR+L++ +  L+REDI++ F NK
Sbjct: 186  VGGILSTSTYKSKKFNVSTGIGLNVDNEKPTTCLNAVLRELSAAACTLRREDIVAAFLNK 245

Query: 619  FE 614
            FE
Sbjct: 246  FE 247



 Score = 56.2 bits (134), Expect(2) = 1e-88
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = -2

Query: 507 GFKPLEELYYKTWLHSGQRVIVEEKNDDKDQGRQSVVTV 391
           GF+ LEELYYKTWLHSGQRVI++EKN+  +Q  ++VVT+
Sbjct: 257 GFQTLEELYYKTWLHSGQRVIIQEKNE--NQVVENVVTI 293


>ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago truncatula]
            gi|355490146|gb|AES71349.1| Holocarboxylase synthetase
            hcs2 [Medicago truncatula]
          Length = 361

 Score =  292 bits (748), Expect(2) = 4e-87
 Identities = 137/182 (75%), Positives = 159/182 (87%)
 Frame = -1

Query: 1159 YMNSLSTKCFGRFFIWSPRLPSTHDVVTKNFGELPVGSVCVADVQYKGRGRSMNVWESPK 980
            +MNSLST  FGR  IWSP L STHDVV+ NF ELPVG+VCV D+Q KGRGRS N WESP 
Sbjct: 94   FMNSLSTNQFGRLLIWSPELTSTHDVVSHNFCELPVGTVCVGDIQNKGRGRSKNAWESPL 153

Query: 979  GCLLFSFTIQMADGRIVPLVQYVVSLAMTEAIHDVCTKDGVPYLDVRIKWPNDLYLDGLK 800
            GCL+FSFT+QM DGRIVPLVQYVVSLA+TEAI D+C K+G+P +DV+IKWPNDLYL+G K
Sbjct: 154  GCLMFSFTLQMEDGRIVPLVQYVVSLAITEAIKDICDKNGLPCVDVKIKWPNDLYLNGFK 213

Query: 799  VGGILCTSTYRSKKFNVSAGLGLNVDNEKPTTSLNAVLRKLTSVSYQLQREDIISVFFNK 620
            VGGILCTSTYRSKKFN+SAG+GLNV+NEKPTTSLN VLR+L+  +YQ QRED+++ FFNK
Sbjct: 214  VGGILCTSTYRSKKFNISAGIGLNVNNEKPTTSLNTVLRELSVGAYQFQREDVLAAFFNK 273

Query: 619  FE 614
            FE
Sbjct: 274  FE 275



 Score = 57.0 bits (136), Expect(2) = 4e-87
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -2

Query: 507 GFKPLEELYYKTWLHSGQRVIVEEKNDDK 421
           GF+ LEELYYKTWLHSGQRVIV+EKN++K
Sbjct: 285 GFQTLEELYYKTWLHSGQRVIVQEKNEEK 313


>emb|CBI19072.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  301 bits (771), Expect(2) = 6e-87
 Identities = 140/182 (76%), Positives = 165/182 (90%)
 Frame = -1

Query: 1159 YMNSLSTKCFGRFFIWSPRLPSTHDVVTKNFGELPVGSVCVADVQYKGRGRSMNVWESPK 980
            +M+SLST  FGRF IWSP+LPSTHDVV++NF ELP+G+VCVADVQ KGRGRS N WESP+
Sbjct: 149  FMSSLSTNTFGRFLIWSPQLPSTHDVVSQNFCELPIGTVCVADVQLKGRGRSKNKWESPR 208

Query: 979  GCLLFSFTIQMADGRIVPLVQYVVSLAMTEAIHDVCTKDGVPYLDVRIKWPNDLYLDGLK 800
            GCLLFSFT+QM DGR VPL+QYVVSLA+TEAI  +C   G+P+LDV+IKWPNDLYL+GLK
Sbjct: 209  GCLLFSFTLQMEDGRTVPLLQYVVSLAITEAIKSICDSKGLPHLDVKIKWPNDLYLNGLK 268

Query: 799  VGGILCTSTYRSKKFNVSAGLGLNVDNEKPTTSLNAVLRKLTSVSYQLQREDIISVFFNK 620
            VGGILCTSTY+S+KFNVSAG+GLNVDNEKPTT LNAVLR+L+SV+YQ +REDI++ FFNK
Sbjct: 269  VGGILCTSTYKSRKFNVSAGIGLNVDNEKPTTCLNAVLRELSSVAYQFRREDIVAAFFNK 328

Query: 619  FE 614
            FE
Sbjct: 329  FE 330



 Score = 47.4 bits (111), Expect(2) = 6e-87
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
 Frame = -2

Query: 525 FACYFS-----GFKPLEELYYKTWLHSGQRVIVEEKNDDKDQGRQSVVTV 391
           F  +FS     GF+ LEELY KTWLHSGQRVIV+E  + + Q  ++VVT+
Sbjct: 329 FETFFSLFINQGFQTLEELYCKTWLHSGQRVIVQE--NIEGQMVENVVTI 376


>ref|XP_002285834.1| PREDICTED: biotin--protein ligase [Vitis vinifera]
          Length = 327

 Score =  301 bits (771), Expect(2) = 6e-87
 Identities = 140/182 (76%), Positives = 165/182 (90%)
 Frame = -1

Query: 1159 YMNSLSTKCFGRFFIWSPRLPSTHDVVTKNFGELPVGSVCVADVQYKGRGRSMNVWESPK 980
            +M+SLST  FGRF IWSP+LPSTHDVV++NF ELP+G+VCVADVQ KGRGRS N WESP+
Sbjct: 60   FMSSLSTNTFGRFLIWSPQLPSTHDVVSQNFCELPIGTVCVADVQLKGRGRSKNKWESPR 119

Query: 979  GCLLFSFTIQMADGRIVPLVQYVVSLAMTEAIHDVCTKDGVPYLDVRIKWPNDLYLDGLK 800
            GCLLFSFT+QM DGR VPL+QYVVSLA+TEAI  +C   G+P+LDV+IKWPNDLYL+GLK
Sbjct: 120  GCLLFSFTLQMEDGRTVPLLQYVVSLAITEAIKSICDSKGLPHLDVKIKWPNDLYLNGLK 179

Query: 799  VGGILCTSTYRSKKFNVSAGLGLNVDNEKPTTSLNAVLRKLTSVSYQLQREDIISVFFNK 620
            VGGILCTSTY+S+KFNVSAG+GLNVDNEKPTT LNAVLR+L+SV+YQ +REDI++ FFNK
Sbjct: 180  VGGILCTSTYKSRKFNVSAGIGLNVDNEKPTTCLNAVLRELSSVAYQFRREDIVAAFFNK 239

Query: 619  FE 614
            FE
Sbjct: 240  FE 241



 Score = 47.4 bits (111), Expect(2) = 6e-87
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
 Frame = -2

Query: 525 FACYFS-----GFKPLEELYYKTWLHSGQRVIVEEKNDDKDQGRQSVVTV 391
           F  +FS     GF+ LEELY KTWLHSGQRVIV+E  + + Q  ++VVT+
Sbjct: 240 FETFFSLFINQGFQTLEELYCKTWLHSGQRVIVQE--NIEGQMVENVVTI 287


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