BLASTX nr result

ID: Cnidium21_contig00013097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013097
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru...    67   1e-13
ref|XP_003601870.1| RCC1 domain-containing protein [Medicago tru...    67   1e-13
ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig...    68   5e-13
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2...    66   1e-12
ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein lig...    66   2e-12

>ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
           gi|355490917|gb|AES72120.1| RCC1 domain-containing
           protein [Medicago truncatula]
          Length = 535

 Score = 67.0 bits (162), Expect(2) = 1e-13
 Identities = 34/63 (53%), Positives = 45/63 (71%)
 Frame = -1

Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190
           GN   NV +PE+V S + +  +VVQ+S T     +AHTF LTESGKLY+FGAG K QLG+
Sbjct: 456 GNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 515

Query: 189 KLL 181
           +L+
Sbjct: 516 ELV 518



 Score = 33.9 bits (76), Expect(2) = 1e-13
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -2

Query: 176 NQTERPNPEQVDVDLG 129
           NQTER NPEQVD+DLG
Sbjct: 520 NQTERVNPEQVDIDLG 535


>ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
           gi|355490918|gb|AES72121.1| RCC1 domain-containing
           protein [Medicago truncatula]
          Length = 432

 Score = 67.0 bits (162), Expect(2) = 1e-13
 Identities = 34/63 (53%), Positives = 45/63 (71%)
 Frame = -1

Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190
           GN   NV +PE+V S + +  +VVQ+S T     +AHTF LTESGKLY+FGAG K QLG+
Sbjct: 353 GNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412

Query: 189 KLL 181
           +L+
Sbjct: 413 ELV 415



 Score = 33.9 bits (76), Expect(2) = 1e-13
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -2

Query: 176 NQTERPNPEQVDVDLG 129
           NQTER NPEQVD+DLG
Sbjct: 417 NQTERVNPEQVDIDLG 432


>ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score = 68.2 bits (165), Expect(2) = 5e-13
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = -1

Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190
           GN   NV SPE+V S + +  +VVQ+S T     +AHTF LTESGKLY+FGAG K QLG+
Sbjct: 456 GNRHANVLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 515

Query: 189 KLL 181
           +L+
Sbjct: 516 ELV 518



 Score = 30.8 bits (68), Expect(2) = 5e-13
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -2

Query: 176 NQTERPNPEQVDVDLG 129
           NQTER NPE+V++DLG
Sbjct: 520 NQTERGNPERVEIDLG 535


>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score = 65.9 bits (159), Expect(2) = 1e-12
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = -1

Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190
           GN   NV SPE+V S + V  +VVQ+S T     +AHTF LTESGKL++FGAG K QLG+
Sbjct: 459 GNRHTNVLSPELVTSLKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGAGDKGQLGM 518

Query: 189 KLL 181
           +L+
Sbjct: 519 ELV 521



 Score = 32.0 bits (71), Expect(2) = 1e-12
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -2

Query: 176 NQTERPNPEQVDVDL 132
           NQTER NPEQVDVDL
Sbjct: 523 NQTERGNPEQVDVDL 537


>ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score = 65.9 bits (159), Expect(2) = 2e-12
 Identities = 33/63 (52%), Positives = 43/63 (68%)
 Frame = -1

Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190
           GN    V  PE+V S + +  +VVQ+S T     +AHTF LTESGKLY+FGAG K QLG+
Sbjct: 451 GNRHAKVLDPELVTSLKQINERVVQISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLGI 510

Query: 189 KLL 181
           +L+
Sbjct: 511 ELV 513



 Score = 30.8 bits (68), Expect(2) = 2e-12
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -2

Query: 176 NQTERPNPEQVDVDLG 129
           NQTER NPE+V++DLG
Sbjct: 515 NQTERGNPERVEIDLG 530


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