BLASTX nr result
ID: Cnidium21_contig00013097
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00013097 (471 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru... 67 1e-13 ref|XP_003601870.1| RCC1 domain-containing protein [Medicago tru... 67 1e-13 ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig... 68 5e-13 ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2... 66 1e-12 ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein lig... 66 2e-12 >ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula] gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula] Length = 535 Score = 67.0 bits (162), Expect(2) = 1e-13 Identities = 34/63 (53%), Positives = 45/63 (71%) Frame = -1 Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190 GN NV +PE+V S + + +VVQ+S T +AHTF LTESGKLY+FGAG K QLG+ Sbjct: 456 GNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 515 Query: 189 KLL 181 +L+ Sbjct: 516 ELV 518 Score = 33.9 bits (76), Expect(2) = 1e-13 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = -2 Query: 176 NQTERPNPEQVDVDLG 129 NQTER NPEQVD+DLG Sbjct: 520 NQTERVNPEQVDIDLG 535 >ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula] gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula] Length = 432 Score = 67.0 bits (162), Expect(2) = 1e-13 Identities = 34/63 (53%), Positives = 45/63 (71%) Frame = -1 Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190 GN NV +PE+V S + + +VVQ+S T +AHTF LTESGKLY+FGAG K QLG+ Sbjct: 353 GNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412 Query: 189 KLL 181 +L+ Sbjct: 413 ELV 415 Score = 33.9 bits (76), Expect(2) = 1e-13 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = -2 Query: 176 NQTERPNPEQVDVDLG 129 NQTER NPEQVD+DLG Sbjct: 417 NQTERVNPEQVDIDLG 432 >ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] Length = 535 Score = 68.2 bits (165), Expect(2) = 5e-13 Identities = 35/63 (55%), Positives = 45/63 (71%) Frame = -1 Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190 GN NV SPE+V S + + +VVQ+S T +AHTF LTESGKLY+FGAG K QLG+ Sbjct: 456 GNRHANVLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 515 Query: 189 KLL 181 +L+ Sbjct: 516 ELV 518 Score = 30.8 bits (68), Expect(2) = 5e-13 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = -2 Query: 176 NQTERPNPEQVDVDLG 129 NQTER NPE+V++DLG Sbjct: 520 NQTERGNPERVEIDLG 535 >ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa] Length = 538 Score = 65.9 bits (159), Expect(2) = 1e-12 Identities = 35/63 (55%), Positives = 45/63 (71%) Frame = -1 Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190 GN NV SPE+V S + V +VVQ+S T +AHTF LTESGKL++FGAG K QLG+ Sbjct: 459 GNRHTNVLSPELVTSLKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGAGDKGQLGM 518 Query: 189 KLL 181 +L+ Sbjct: 519 ELV 521 Score = 32.0 bits (71), Expect(2) = 1e-12 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = -2 Query: 176 NQTERPNPEQVDVDL 132 NQTER NPEQVDVDL Sbjct: 523 NQTERGNPEQVDVDL 537 >ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] Length = 530 Score = 65.9 bits (159), Expect(2) = 2e-12 Identities = 33/63 (52%), Positives = 43/63 (68%) Frame = -1 Query: 369 GNIDLNVQSPEMVPSPELVTSKVVQVSTTGYGSADAHTFFLTESGKLYSFGAGHKRQLGV 190 GN V PE+V S + + +VVQ+S T +AHTF LTESGKLY+FGAG K QLG+ Sbjct: 451 GNRHAKVLDPELVTSLKQINERVVQISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLGI 510 Query: 189 KLL 181 +L+ Sbjct: 511 ELV 513 Score = 30.8 bits (68), Expect(2) = 2e-12 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = -2 Query: 176 NQTERPNPEQVDVDLG 129 NQTER NPE+V++DLG Sbjct: 515 NQTERGNPERVEIDLG 530