BLASTX nr result

ID: Cnidium21_contig00013085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013085
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Gly...   365   1e-98
ref|XP_002511796.1| conserved hypothetical protein [Ricinus comm...   364   3e-98
ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine ...   362   1e-97
gb|AER13163.1| cyclin-like F-box [Phaseolus vulgaris]                 349   1e-93
ref|XP_002320094.1| f-box family protein [Populus trichocarpa] g...   349   1e-93

>ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 364

 Score =  365 bits (938), Expect = 1e-98
 Identities = 185/340 (54%), Positives = 240/340 (70%), Gaps = 1/340 (0%)
 Frame = +2

Query: 134  MEILLDFLRYLETDTAVNILASLDDTSDLIRASLVSHFWRDFVVSNGLCKQLCLRKFPQL 313
            ME   D L YL++DT++ IL SLDD +DL+RA+ VS  WRD V++NGLCKQLCLR FPQL
Sbjct: 2    MEYCKDVLSYLDSDTSIKILMSLDDLADLVRATCVSRSWRDIVIANGLCKQLCLRMFPQL 61

Query: 314  ANIAHVTE-PAHKVKKSTDGGSSTSLQWEALEREHRVYGSIFRALTKVKAINCVAEAFGA 490
            + +A V E   +  K+  + GSS S++W +L REHRV+  + RAL    A+NC+A+  GA
Sbjct: 62   SRVAFVVELNQNGAKEHAEVGSSYSMEWLSLLREHRVFAYLGRALMSSVAMNCIAKTVGA 121

Query: 491  SSTDNFPEESINNTLDPRDEIQRRFSYWSSKGQKNPDVPETLIYRLKAGICLVTEIGIRP 670
            SSTDNFP+ESI+NTL+PRD I  R+ YWSS GQ NP+VPETL Y L + IC++TEI I+P
Sbjct: 122  SSTDNFPQESIDNTLEPRDHINGRYYYWSSNGQSNPNVPETLTYELVSPICVITEINIQP 181

Query: 671  FRADFQNGMPIYSAKSVRFRMGYPKFPTEISNLELPVQQNADEKITWTYTSPVFSMSQEN 850
            F+ADFQ G PIYSAKSVRF+MG+PK   + ++         DE   WTYTSP F MS+EN
Sbjct: 182  FQADFQIGSPIYSAKSVRFKMGHPKASLDATD---------DEMFVWTYTSPEFPMSKEN 232

Query: 851  VLQHFKLPEPVLCIGGFVQLEMFGRVQTQEMDEKYYICVSHVQVIGRPLFPAFDVDIIES 1030
             LQ FKLPEPVLCIGGF+Q+E+ GR+Q QEMD   YICVSHVQV+G  L P F+VDI++ 
Sbjct: 233  RLQKFKLPEPVLCIGGFLQIELLGRIQRQEMDGLLYICVSHVQVLGGSLSPPFNVDILQP 292

Query: 1031 SGKFTLKYYPEALPRTMLTGNSDPMTNLTVRAEDRVWEHL 1150
            SG F LK    A  + ++T  ++       + E R ++H+
Sbjct: 293  SGMFVLKRDQLADHQPVVTSGNESQEISAEQREVRDFQHI 332


>ref|XP_002511796.1| conserved hypothetical protein [Ricinus communis]
            gi|223548976|gb|EEF50465.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 362

 Score =  364 bits (935), Expect = 3e-98
 Identities = 186/313 (59%), Positives = 224/313 (71%)
 Frame = +2

Query: 134  MEILLDFLRYLETDTAVNILASLDDTSDLIRASLVSHFWRDFVVSNGLCKQLCLRKFPQL 313
            ME  +DF  +L+ DT + IL  L+D SDL+R S VS  WR FV++NGLCKQLCLR FP L
Sbjct: 1    METGMDFFSWLDYDTVMRILMCLEDPSDLVRVSSVSRSWRHFVIANGLCKQLCLRMFPCL 60

Query: 314  ANIAHVTEPAHKVKKSTDGGSSTSLQWEALEREHRVYGSIFRALTKVKAINCVAEAFGAS 493
             ++ HVTEP   +K     G S S++WE LEREHRV+  + R  T      C++EA  AS
Sbjct: 61   HSVDHVTEP-DSMKNPLGIGCSKSMEWETLEREHRVFAFLARGCTSFALKECISEAISAS 119

Query: 494  STDNFPEESINNTLDPRDEIQRRFSYWSSKGQKNPDVPETLIYRLKAGICLVTEIGIRPF 673
            STDN+P ESI+NTL+PRD I RR SYWSSKGQ NP VPETLIY+L A ICL+TEI + PF
Sbjct: 120  STDNYPGESIHNTLEPRDRIARRASYWSSKGQSNPAVPETLIYKLVADICLITEISVHPF 179

Query: 674  RADFQNGMPIYSAKSVRFRMGYPKFPTEISNLELPVQQNADEKITWTYTSPVFSMSQENV 853
            +A FQ G PIYSA SVRFRMG+ K P E   +  P    AD+ + WTYTSP F+M+QEN 
Sbjct: 180  QAFFQPGTPIYSANSVRFRMGHLKAP-EDDPMSEPCDNCADD-VVWTYTSPEFAMAQENR 237

Query: 854  LQHFKLPEPVLCIGGFVQLEMFGRVQTQEMDEKYYICVSHVQVIGRPLFPAFDVDIIESS 1033
            LQ F+LPEPVLCIGG +Q+E+ GRVQ QEMD  +YICVSHVQV+GRPL PAF  +I+E S
Sbjct: 238  LQKFELPEPVLCIGGILQVELLGRVQKQEMDGLFYICVSHVQVLGRPLSPAFTFEILERS 297

Query: 1034 GKFTLKYYPEALP 1072
            GKF LK    A P
Sbjct: 298  GKFVLKTQSYARP 310


>ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine max]
          Length = 363

 Score =  362 bits (930), Expect = 1e-97
 Identities = 187/366 (51%), Positives = 247/366 (67%), Gaps = 1/366 (0%)
 Frame = +2

Query: 134  MEILLDFLRYLETDTAVNILASLDDTSDLIRASLVSHFWRDFVVSNGLCKQLCLRKFPQL 313
            ME   D L  L++DT++ I   LDD +DL+R + VS  WR FV++NGLCKQLCLR FPQL
Sbjct: 2    MEYCKDVLSCLDSDTSLKIFMCLDDLADLVRVTCVSRSWRHFVIANGLCKQLCLRMFPQL 61

Query: 314  ANIAHVTE-PAHKVKKSTDGGSSTSLQWEALEREHRVYGSIFRALTKVKAINCVAEAFGA 490
            + +A V E   +  K+  + GSS S++W +L REHRVY  + RAL    A+NC+A+  GA
Sbjct: 62   SRVAFVVELNQNGAKEHAEVGSSYSMEWLSLLREHRVYAYLGRALMSSVAMNCIAKTVGA 121

Query: 491  SSTDNFPEESINNTLDPRDEIQRRFSYWSSKGQKNPDVPETLIYRLKAGICLVTEIGIRP 670
            SSTDNFP+ESI+NTL+PRD I  R+ YWSS GQ NP+VPETL Y L + IC++TEI I+P
Sbjct: 122  SSTDNFPQESIDNTLEPRDYINGRYCYWSSDGQSNPNVPETLTYELVSQICVITEINIQP 181

Query: 671  FRADFQNGMPIYSAKSVRFRMGYPKFPTEISNLELPVQQNADEKITWTYTSPVFSMSQEN 850
            F+ADFQ G PIYSAKSVRF+MG+PK   ++++         DE   WTY SP F MSQEN
Sbjct: 182  FQADFQRGSPIYSAKSVRFKMGHPKASLDVAD---------DEMFVWTYNSPEFPMSQEN 232

Query: 851  VLQHFKLPEPVLCIGGFVQLEMFGRVQTQEMDEKYYICVSHVQVIGRPLFPAFDVDIIES 1030
             LQ FKLPEPVLCIGG +Q+E+ GRVQ QEMD   YICVSHVQV+G  L P F+VDI++ 
Sbjct: 233  RLQKFKLPEPVLCIGGILQIELLGRVQRQEMDGLLYICVSHVQVLGSSLSPPFNVDILQP 292

Query: 1031 SGKFTLKYYPEALPRTMLTGNSDPMTNLTVRAEDRVWEHLEGLVEFLMQRNPDDDLNFIE 1210
            SG F LK    A  ++++T  ++    L  + E R ++H+  +         +D+ +  E
Sbjct: 293  SGMFVLKRDQLANHQSVVTSGNESQEILAEQRELRDYQHIVTIFRGQALGIVEDEWDEEE 352

Query: 1211 WDGNMD 1228
            +D + D
Sbjct: 353  YDDDFD 358


>gb|AER13163.1| cyclin-like F-box [Phaseolus vulgaris]
          Length = 363

 Score =  349 bits (896), Expect = 1e-93
 Identities = 176/307 (57%), Positives = 218/307 (71%), Gaps = 1/307 (0%)
 Frame = +2

Query: 134  MEILLDFLRYLETDTAVNILASLDDTSDLIRASLVSHFWRDFVVSNGLCKQLCLRKFPQL 313
            ME   DF+ YL+TDT + IL  LDD +D +R + VS  WR  V++NGLCKQLCLR FPQL
Sbjct: 1    MEYHKDFITYLDTDTCLKILMCLDDPADFVRVTCVSRSWRHSVIANGLCKQLCLRMFPQL 60

Query: 314  ANIAHVTE-PAHKVKKSTDGGSSTSLQWEALEREHRVYGSIFRALTKVKAINCVAEAFGA 490
            +  A V E   H  K+  + GSS S++W  L+REHRV+  + +AL    A+NC+A+  GA
Sbjct: 61   SRFAFVVELNQHGTKEHEEVGSSYSMEWLVLQREHRVFSYLGKALMSSVAMNCIAKTVGA 120

Query: 491  SSTDNFPEESINNTLDPRDEIQRRFSYWSSKGQKNPDVPETLIYRLKAGICLVTEIGIRP 670
            SSTDNFP+ESI+NTL+PRD I  R+SYWSS GQ NP+VPETL Y L + IC++TEI I+P
Sbjct: 121  SSTDNFPQESIDNTLEPRDVISGRYSYWSSDGQSNPNVPETLTYELVSQICVITEINIQP 180

Query: 671  FRADFQNGMPIYSAKSVRFRMGYPKFPTEISNLELPVQQNADEKITWTYTSPVFSMSQEN 850
            F+A FQ G PIYSA SVRF+MG+PK   +  + EL           WTYTSP F MSQEN
Sbjct: 181  FQAHFQLGSPIYSANSVRFKMGHPKDSLDAFDEEL---------FVWTYTSPEFPMSQEN 231

Query: 851  VLQHFKLPEPVLCIGGFVQLEMFGRVQTQEMDEKYYICVSHVQVIGRPLFPAFDVDIIES 1030
             LQ FKLPEPVLCIGG +Q+E+ GRVQ QEMD   Y+CVSHVQV+G  L P F+VDI++ 
Sbjct: 232  RLQKFKLPEPVLCIGGILQIELLGRVQRQEMDGLLYMCVSHVQVLGGSLSPPFNVDILQP 291

Query: 1031 SGKFTLK 1051
            SG F LK
Sbjct: 292  SGMFVLK 298


>ref|XP_002320094.1| f-box family protein [Populus trichocarpa]
            gi|222860867|gb|EEE98409.1| f-box family protein [Populus
            trichocarpa]
          Length = 374

 Score =  349 bits (896), Expect = 1e-93
 Identities = 175/318 (55%), Positives = 226/318 (71%)
 Frame = +2

Query: 131  RMEILLDFLRYLETDTAVNILASLDDTSDLIRASLVSHFWRDFVVSNGLCKQLCLRKFPQ 310
            RMEI +DFL  L+ DT++ IL  L+D SDL+RAS VS  WRDFV++NGLCKQLCL  FP 
Sbjct: 4    RMEIRMDFLNCLDHDTSIKILRCLEDPSDLVRASYVSRSWRDFVIANGLCKQLCLSMFPH 63

Query: 311  LANIAHVTEPAHKVKKSTDGGSSTSLQWEALEREHRVYGSIFRALTKVKAINCVAEAFGA 490
            L  +  V EP+  ++K+++ G S  ++WE L+REH+ Y  + +A       +C+ +A  A
Sbjct: 64   LLRVDCVIEPSCVMEKASEVGCSKFVEWETLKREHKAYAFLAQACLSFPFDDCIKDAISA 123

Query: 491  SSTDNFPEESINNTLDPRDEIQRRFSYWSSKGQKNPDVPETLIYRLKAGICLVTEIGIRP 670
            SSTDN+PEESI NTL   D + RR SYWSSKGQ+   VPETL+Y+L A IC++TEI I+P
Sbjct: 124  SSTDNYPEESIRNTLQKGDRVGRRPSYWSSKGQRKAAVPETLVYKLVADICVITEINIQP 183

Query: 671  FRADFQNGMPIYSAKSVRFRMGYPKFPTEISNLELPVQQNADEKITWTYTSPVFSMSQEN 850
            F+A FQ G PIYSA+SVRF +G+PK P +   L  P+   AD+K  WTY+SP F M+QE 
Sbjct: 184  FQAYFQQGSPIYSAESVRFHLGHPKCPMD-DTLGEPLDNCADDKFIWTYSSPEFPMAQER 242

Query: 851  VLQHFKLPEPVLCIGGFVQLEMFGRVQTQEMDEKYYICVSHVQVIGRPLFPAFDVDIIES 1030
             LQ+FKLPEPV+CIGG +Q+E+  RVQ QEMD  +YICV+HVQV GRPL  AF V+I+  
Sbjct: 243  SLQNFKLPEPVVCIGGILQIELLRRVQRQEMDGLFYICVAHVQVKGRPLSSAFGVEILGP 302

Query: 1031 SGKFTLKYYPEALPRTML 1084
            SGKF LK    A PR+ L
Sbjct: 303  SGKFVLKTLSSA-PRSSL 319


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