BLASTX nr result

ID: Cnidium21_contig00013079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013079
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274572.1| PREDICTED: uncharacterized protein LOC100260...   385   e-104
emb|CBI25290.3| unnamed protein product [Vitis vinifera]              383   e-104
ref|XP_002316448.1| predicted protein [Populus trichocarpa] gi|2...   367   5e-99
gb|ADU60361.1| glutamyl-tRNA reductase binding protein [Nicotian...   362   1e-97
gb|ADU60362.1| glutamyl-tRNA reductase binding protein [Nicotian...   362   1e-97

>ref|XP_002274572.1| PREDICTED: uncharacterized protein LOC100260424 [Vitis vinifera]
          Length = 324

 Score =  385 bits (988), Expect = e-104
 Identities = 195/323 (60%), Positives = 238/323 (73%), Gaps = 3/323 (0%)
 Frame = +1

Query: 70   MILQTQSIFSNHSIHSSVFP-ITTPKPPARSTYKSSQFKPHNTTLRTPRLCILSSVAAAT 246
            MI  +Q +    S+ + ++P +   KP   + +   +  P   +L     C +S  +   
Sbjct: 1    MIHHSQMLPQTQSLTTHLWPSLPLSKPTTITHFSPPKATPFRKSLFQTLKCSVSVASEPA 60

Query: 247  ESITTNNKPSPAEVCRTIMELSSVATLSTLTPHGFPLGIGVRFAVEPEQGTPILCFNPSF 426
                  NKP PAEV RTIMELSSVATLS LT  G+PLG+GVRFAV+P QGTPI+C N S 
Sbjct: 61   HLELVRNKPFPAEVSRTIMELSSVATLSALTQDGWPLGVGVRFAVDP-QGTPIVCLNASH 119

Query: 427  --YPSDSKSSLHVQLEQCGLRTPQCTIQGCLAKPQDASMLKKLQLIWKKRFNEDVDENLI 600
              +  D +SSLHVQLEQCGLRTPQCTIQG L KP+D   LKKL  IW++RF ++VDENL+
Sbjct: 120  SHFSIDRRSSLHVQLEQCGLRTPQCTIQGSLDKPEDRMALKKLHSIWERRFGKEVDENLL 179

Query: 601  HIVAVERILQTEDFMEDGVWFNSLDYKMAVPDPLRDSAESIIHEINTNNMEDIHRFCNIY 780
            H+V+VER+LQ EDF E G W  S DY+ A PDPLRDSAE  + EINTNNMED++RFCNIY
Sbjct: 180  HVVSVERVLQMEDFQEVGTWVTSSDYRTANPDPLRDSAEKFVDEINTNNMEDVNRFCNIY 239

Query: 781  VDLNFQVSEANMIWVDRLGFDVRLTSPQNDVFEVRIPFPREVTDEKGAKSSFNCMSQLAW 960
            VDL+FQ  EA +IWVDRLGFD+R++SPQ DVFEVRIPFPREVTDEKGAKSSFN MSQLAW
Sbjct: 240  VDLDFQALEAKLIWVDRLGFDMRISSPQKDVFEVRIPFPREVTDEKGAKSSFNSMSQLAW 299

Query: 961  EMEKHYHAQDYNKVNQLKKVTCR 1029
            E+EK+Y+A D+ KV QLK++T R
Sbjct: 300  EVEKNYNAPDFKKVKQLKQITYR 322


>emb|CBI25290.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  383 bits (984), Expect = e-104
 Identities = 201/328 (61%), Positives = 243/328 (74%), Gaps = 8/328 (2%)
 Frame = +1

Query: 70   MILQTQSIFSNHSIHSSVFPITTP------KPPARSTYKSSQFKPHNTTLRTPRLCILSS 231
            M+ QTQS+ + H   S   P++ P       PP  + ++ S F+    TL+    C +S 
Sbjct: 1    MLPQTQSL-TTHLWPS--LPLSKPTTITHFSPPKATPFRKSLFQ----TLK----CSVSV 49

Query: 232  VAAATESITTNNKPSPAEVCRTIMELSSVATLSTLTPHGFPLGIGVRFAVEPEQGTPILC 411
             +         NKP PAEV RTIMELSSVATLS LT  G+PLG+GVRFAV+P QGTPI+C
Sbjct: 50   ASEPAHLELVRNKPFPAEVSRTIMELSSVATLSALTQDGWPLGVGVRFAVDP-QGTPIVC 108

Query: 412  FNPSF--YPSDSKSSLHVQLEQCGLRTPQCTIQGCLAKPQDASMLKKLQLIWKKRFNEDV 585
             N S   +  D +SSLHVQLEQCGLRTPQCTIQG L KP+D   LKKL  IW++RF ++V
Sbjct: 109  LNASHSHFSIDRRSSLHVQLEQCGLRTPQCTIQGSLDKPEDRMALKKLHSIWERRFGKEV 168

Query: 586  DENLIHIVAVERILQTEDFMEDGVWFNSLDYKMAVPDPLRDSAESIIHEINTNNMEDIHR 765
            DENL+H+V+VER+LQ EDF E G W  S DY+ A PDPLRDSAE  + EINTNNMED++R
Sbjct: 169  DENLLHVVSVERVLQMEDFQEVGTWVTSSDYRTANPDPLRDSAEKFVDEINTNNMEDVNR 228

Query: 766  FCNIYVDLNFQVSEANMIWVDRLGFDVRLTSPQNDVFEVRIPFPREVTDEKGAKSSFNCM 945
            FCNIYVDL+FQ  EA +IWVDRLGFD+R++SPQ DVFEVRIPFPREVTDEKGAKSSFN M
Sbjct: 229  FCNIYVDLDFQALEAKLIWVDRLGFDMRISSPQKDVFEVRIPFPREVTDEKGAKSSFNSM 288

Query: 946  SQLAWEMEKHYHAQDYNKVNQLKKVTCR 1029
            SQLAWE+EK+Y+A D+ KV QLK++T R
Sbjct: 289  SQLAWEVEKNYNAPDFKKVKQLKQITYR 316


>ref|XP_002316448.1| predicted protein [Populus trichocarpa] gi|222865488|gb|EEF02619.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  367 bits (941), Expect = 5e-99
 Identities = 194/326 (59%), Positives = 240/326 (73%), Gaps = 8/326 (2%)
 Frame = +1

Query: 70   MILQTQSIFSNHSIHSSVFPITTPKPPARSTYKSSQFKPHNTTLRTPRL---CILSSVAA 240
            M LQTQS+ +N  + S    +  PKP   +T K  QF P       P+    C LS+V+A
Sbjct: 1    MHLQTQSLTTNLPLPS----LFLPKP---TTTKPHQFTPLKQQKPFPQFSLKCSLSTVSA 53

Query: 241  ATESI---TTNNKPSPAEVCRTIMELSSVATLSTLTPHGFPLGIGVRFAVEPEQGTPILC 411
               +    ++N+KP PAE+ RTIMELSSV TLSTLTP G+PL +GVRFAV+ + GTPILC
Sbjct: 54   EPPTHVVGSSNDKPFPAEISRTIMELSSVGTLSTLTPDGWPLSVGVRFAVD-DDGTPILC 112

Query: 412  FNPSF--YPSDSKSSLHVQLEQCGLRTPQCTIQGCLAKPQDASMLKKLQLIWKKRFNEDV 585
             + S   +  D +SSLHVQLEQ G+RTPQCTIQG L KP+D  +LK+   +WKKRF E+V
Sbjct: 113  LSDSHRQFSVDRRSSLHVQLEQSGMRTPQCTIQGSLDKPEDTKLLKRAHSMWKKRFGEEV 172

Query: 586  DENLIHIVAVERILQTEDFMEDGVWFNSLDYKMAVPDPLRDSAESIIHEINTNNMEDIHR 765
             + LI++VA+ER+LQ EDF+EDGVW +S DYK A PDPLRD AE+  +EIN  NMED+ R
Sbjct: 173  KDELIYVVAMERVLQMEDFVEDGVWVSSSDYKNASPDPLRDFAEAFANEINNKNMEDVSR 232

Query: 766  FCNIYVDLNFQVSEANMIWVDRLGFDVRLTSPQNDVFEVRIPFPREVTDEKGAKSSFNCM 945
            FCN+YVDL+FQVSEA MIWVDRLGFD+RL SPQ   F+VRIPFPREVTD KGAKSSFN M
Sbjct: 233  FCNVYVDLDFQVSEAKMIWVDRLGFDMRLWSPQKGTFDVRIPFPREVTDVKGAKSSFNGM 292

Query: 946  SQLAWEMEKHYHAQDYNKVNQLKKVT 1023
            SQLAWE+EK+Y   ++ KV QLK++T
Sbjct: 293  SQLAWEVEKNYQTLNFKKVQQLKQIT 318


>gb|ADU60361.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score =  362 bits (930), Expect = 1e-97
 Identities = 183/274 (66%), Positives = 214/274 (78%), Gaps = 3/274 (1%)
 Frame = +1

Query: 208  PRLCILSSVAAATESITTNN-KPSPAEVCRTIMELSSVATLSTLTPHGFPLGIGVRFAVE 384
            P  C +S V+   +S  TNN KP PAEV RTIMELSSV TLST T  G+PLG GVRFAV+
Sbjct: 43   PLKCAVSVVSEPIQSEKTNNGKPYPAEVSRTIMELSSVGTLSTPTQDGWPLGFGVRFAVD 102

Query: 385  PEQGTPILCFNP--SFYPSDSKSSLHVQLEQCGLRTPQCTIQGCLAKPQDASMLKKLQLI 558
            P  GTP+L  N   S    + KSS+HVQLEQ GLRTPQCTIQG L KP+D + LKKL  +
Sbjct: 103  PH-GTPVLFLNDATSKLSVNCKSSIHVQLEQYGLRTPQCTIQGTLEKPEDTTALKKLHSV 161

Query: 559  WKKRFNEDVDENLIHIVAVERILQTEDFMEDGVWFNSLDYKMAVPDPLRDSAESIIHEIN 738
            WKKRF  +VDE+ + +++VER+LQ EDF EDG+W  S DYK+A PDPLRD AE +I EIN
Sbjct: 162  WKKRFGHEVDEDHLFLLSVERVLQLEDFAEDGIWVTSSDYKLANPDPLRDFAERMIEEIN 221

Query: 739  TNNMEDIHRFCNIYVDLNFQVSEANMIWVDRLGFDVRLTSPQNDVFEVRIPFPREVTDEK 918
            T+N EDI RFCNIYVDL+FQVS+A M+WVDRLGFDVR  SPQNDVFE RIPFPREV DEK
Sbjct: 222  THNREDILRFCNIYVDLDFQVSDAKMLWVDRLGFDVRFRSPQNDVFEARIPFPREVADEK 281

Query: 919  GAKSSFNCMSQLAWEMEKHYHAQDYNKVNQLKKV 1020
            GAKSSFNCMSQLAWE+EK++HA ++ K  QLKK+
Sbjct: 282  GAKSSFNCMSQLAWEVEKNFHAAEFEKAKQLKKI 315


>gb|ADU60362.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score =  362 bits (929), Expect = 1e-97
 Identities = 183/274 (66%), Positives = 214/274 (78%), Gaps = 3/274 (1%)
 Frame = +1

Query: 208  PRLCILSSVAAATESITTNN-KPSPAEVCRTIMELSSVATLSTLTPHGFPLGIGVRFAVE 384
            P  C +S V+   +S  TNN KP PAEV RTIMELSSV TLST T  G+PLG GVRFAV+
Sbjct: 43   PLRCAVSVVSEPIQSEKTNNGKPYPAEVSRTIMELSSVGTLSTPTLDGWPLGFGVRFAVD 102

Query: 385  PEQGTPILCFNP--SFYPSDSKSSLHVQLEQCGLRTPQCTIQGCLAKPQDASMLKKLQLI 558
            P  GTP+L  N   S    + KSS+HVQ EQ GLRTPQCTIQG L KP+D + LKKL  +
Sbjct: 103  PH-GTPVLFLNDATSKLSVNCKSSIHVQFEQYGLRTPQCTIQGTLEKPEDTTALKKLHSV 161

Query: 559  WKKRFNEDVDENLIHIVAVERILQTEDFMEDGVWFNSLDYKMAVPDPLRDSAESIIHEIN 738
            WKKRF  +VDE+ + +++VER+LQ EDF EDG+W  S DYK+A PDPLRD AE +I EIN
Sbjct: 162  WKKRFGHEVDEDHLFLLSVERVLQLEDFAEDGIWVTSSDYKLANPDPLRDFAERMIEEIN 221

Query: 739  TNNMEDIHRFCNIYVDLNFQVSEANMIWVDRLGFDVRLTSPQNDVFEVRIPFPREVTDEK 918
            T+N EDI RFCNIYVDL+FQVS+A M+WVDRLGFDVR  SPQNDVFE RIPFPREVTDEK
Sbjct: 222  THNREDILRFCNIYVDLDFQVSDAKMLWVDRLGFDVRFRSPQNDVFEARIPFPREVTDEK 281

Query: 919  GAKSSFNCMSQLAWEMEKHYHAQDYNKVNQLKKV 1020
            GAKSSFNCMSQLAWE+EK++HA ++ K  QLKK+
Sbjct: 282  GAKSSFNCMSQLAWEVEKNFHAAEFEKAKQLKKI 315


Top