BLASTX nr result

ID: Cnidium21_contig00013054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013054
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237867.1| PHD4 [Glycine max] gi|115394654|gb|ABI97243....   224   4e-57
ref|XP_002324777.1| predicted protein [Populus trichocarpa] gi|2...   221   4e-56
ref|XP_002514076.1| DNA binding protein, putative [Ricinus commu...   221   5e-56
ref|XP_002308535.1| predicted protein [Populus trichocarpa] gi|2...   220   8e-56
ref|XP_004144207.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-l...   219   1e-55

>ref|NP_001237867.1| PHD4 [Glycine max] gi|115394654|gb|ABI97243.1| PHD4 [Glycine max]
          Length = 254

 Score =  224 bits (572), Expect = 4e-57
 Identities = 104/122 (85%), Positives = 112/122 (91%)
 Frame = +1

Query: 64  MEGGYAPRTVEEVYVDFKARRTALIKALTIDVAEFYQLCDPEKENLCLYGYPNEQWEVNL 243
           ME GY PRTVEEV+ DFK RR ALIKALT DV EFYQ CDPEKENLCLYG+P+EQWEVNL
Sbjct: 1   MEAGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNL 60

Query: 244 PADEVPPELPEPALGINFARDGMKEKDWLSLVAVHSDTWLISVAFYFGSRFGFDRADRKR 423
           PA+EVPPELPEPALGINFARDGM+EKDWLSLVAVHSD WL++VAFYFG+RFGFD ADRKR
Sbjct: 61  PAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDEADRKR 120

Query: 424 LF 429
           LF
Sbjct: 121 LF 122


>ref|XP_002324777.1| predicted protein [Populus trichocarpa] gi|222866211|gb|EEF03342.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  221 bits (564), Expect = 4e-56
 Identities = 104/124 (83%), Positives = 113/124 (91%), Gaps = 2/124 (1%)
 Frame = +1

Query: 64  MEGG--YAPRTVEEVYVDFKARRTALIKALTIDVAEFYQLCDPEKENLCLYGYPNEQWEV 237
           M+GG  Y PRTVEEV+ DFK RR  +IKALT DV EFYQ CDPEKENLCLYG+P+EQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 238 NLPADEVPPELPEPALGINFARDGMKEKDWLSLVAVHSDTWLISVAFYFGSRFGFDRADR 417
           NLPA+EVPPELPEPALGINFARDGM+EKDWLSLVAVHSD WL+SVAFYFGSRFGFD+ADR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGSRFGFDKADR 120

Query: 418 KRLF 429
           KRLF
Sbjct: 121 KRLF 124


>ref|XP_002514076.1| DNA binding protein, putative [Ricinus communis]
           gi|223546532|gb|EEF48030.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 251

 Score =  221 bits (563), Expect = 5e-56
 Identities = 103/124 (83%), Positives = 113/124 (91%), Gaps = 2/124 (1%)
 Frame = +1

Query: 64  MEGG--YAPRTVEEVYVDFKARRTALIKALTIDVAEFYQLCDPEKENLCLYGYPNEQWEV 237
           M+GG  Y PRTVEEV+ DFK RR  +IKALT DV EFYQ CDPEKENLCLYG+PNEQWEV
Sbjct: 1   MDGGVQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 238 NLPADEVPPELPEPALGINFARDGMKEKDWLSLVAVHSDTWLISVAFYFGSRFGFDRADR 417
           NLPA+EVPPELPEPALGINFARDGM+EKDWLSLVAVHSD WL++VAFYFG+RFGFD+ADR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 418 KRLF 429
           KRLF
Sbjct: 121 KRLF 124


>ref|XP_002308535.1| predicted protein [Populus trichocarpa] gi|222854511|gb|EEE92058.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  220 bits (561), Expect = 8e-56
 Identities = 103/124 (83%), Positives = 113/124 (91%), Gaps = 2/124 (1%)
 Frame = +1

Query: 64  MEGG--YAPRTVEEVYVDFKARRTALIKALTIDVAEFYQLCDPEKENLCLYGYPNEQWEV 237
           M+GG  Y PRTVEEV+ DFK RR  +IKALT DV EFYQ CDPEKENLCLYG+P+EQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 238 NLPADEVPPELPEPALGINFARDGMKEKDWLSLVAVHSDTWLISVAFYFGSRFGFDRADR 417
           NLPA+EVPPELPEPALGINFARDGM+EKDWLSLVAVHSD WL+SV+FYFGSRFGFD+ADR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVSFYFGSRFGFDKADR 120

Query: 418 KRLF 429
           KRLF
Sbjct: 121 KRLF 124


>ref|XP_004144207.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-like isoform 2 [Cucumis
           sativus] gi|449518231|ref|XP_004166146.1| PREDICTED: PHD
           finger protein ALFIN-LIKE 5-like isoform 2 [Cucumis
           sativus]
          Length = 234

 Score =  219 bits (559), Expect = 1e-55
 Identities = 103/124 (83%), Positives = 112/124 (90%), Gaps = 2/124 (1%)
 Frame = +1

Query: 64  MEGG--YAPRTVEEVYVDFKARRTALIKALTIDVAEFYQLCDPEKENLCLYGYPNEQWEV 237
           M+GG  Y PRTVEEV+ DFK RR  LIKALT DV EFYQ CDPEKENLCLYG+P+EQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 238 NLPADEVPPELPEPALGINFARDGMKEKDWLSLVAVHSDTWLISVAFYFGSRFGFDRADR 417
           NLPA+EVPPELPEPALGINFARDGM+EKDWLSLVAVHSD WL+SVAFYFG+RFGFD+ DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 418 KRLF 429
           KRLF
Sbjct: 121 KRLF 124


Top