BLASTX nr result

ID: Cnidium21_contig00013049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013049
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30926.3| unnamed protein product [Vitis vinifera]              124   4e-26
ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g...   124   4e-26
emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]   124   4e-26
ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g...   121   3e-25
ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus ...   118   3e-24

>emb|CBI30926.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  124 bits (312), Expect = 4e-26
 Identities = 65/90 (72%), Positives = 76/90 (84%)
 Frame = +3

Query: 6   YGSLPSPYSSKPYGGLPRATVLEMVVPAHALGKVMGKRGANLDNIRKISGADIDISHSTS 185
           YGS+ S YSSK YGGLP  +  +MV+PA+A+GKVMGK GAN+ NIRKISGA I+IS S S
Sbjct: 347 YGSMSS-YSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKS 405

Query: 186 SRGDCVALISGTPEQKRAAENLVEAFIMST 275
           SRGD VALISGTPEQKR AENL++AFIM+T
Sbjct: 406 SRGDRVALISGTPEQKRTAENLIQAFIMAT 435


>ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
          Length = 623

 Score =  124 bits (312), Expect = 4e-26
 Identities = 65/90 (72%), Positives = 76/90 (84%)
 Frame = +3

Query: 6   YGSLPSPYSSKPYGGLPRATVLEMVVPAHALGKVMGKRGANLDNIRKISGADIDISHSTS 185
           YGS+ S YSSK YGGLP  +  +MV+PA+A+GKVMGK GAN+ NIRKISGA I+IS S S
Sbjct: 535 YGSMSS-YSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKS 593

Query: 186 SRGDCVALISGTPEQKRAAENLVEAFIMST 275
           SRGD VALISGTPEQKR AENL++AFIM+T
Sbjct: 594 SRGDRVALISGTPEQKRTAENLIQAFIMAT 623


>emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
          Length = 637

 Score =  124 bits (312), Expect = 4e-26
 Identities = 65/90 (72%), Positives = 76/90 (84%)
 Frame = +3

Query: 6   YGSLPSPYSSKPYGGLPRATVLEMVVPAHALGKVMGKRGANLDNIRKISGADIDISHSTS 185
           YGS+ S YSSK YGGLP  +  +MV+PA+A+GKVMGK GAN+ NIRKISGA I+IS S S
Sbjct: 549 YGSMSS-YSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKS 607

Query: 186 SRGDCVALISGTPEQKRAAENLVEAFIMST 275
           SRGD VALISGTPEQKR AENL++AFIM+T
Sbjct: 608 SRGDRVALISGTPEQKRTAENLIQAFIMAT 637


>ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 625

 Score =  121 bits (304), Expect = 3e-25
 Identities = 62/99 (62%), Positives = 79/99 (79%), Gaps = 9/99 (9%)
 Frame = +3

Query: 6   YGSLP---------SPYSSKPYGGLPRATVLEMVVPAHALGKVMGKRGANLDNIRKISGA 158
           YGSLP         S Y++K YGGLP  + L+M++PA+A+GKV+GK GAN+ NIRKISGA
Sbjct: 527 YGSLPMGDNGYGSMSSYATKLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGA 586

Query: 159 DIDISHSTSSRGDCVALISGTPEQKRAAENLVEAFIMST 275
            I+IS + S+RGD +ALISGTPEQKRAAENL++AFIM+T
Sbjct: 587 SIEISDNKSARGDRIALISGTPEQKRAAENLIQAFIMAT 625


>ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 462

 Score =  118 bits (296), Expect = 3e-24
 Identities = 61/90 (67%), Positives = 75/90 (83%)
 Frame = +3

Query: 6   YGSLPSPYSSKPYGGLPRATVLEMVVPAHALGKVMGKRGANLDNIRKISGADIDISHSTS 185
           Y S+ S  SSK YGGLP  + LEM+VPA+A+GKV+GK GAN+ NIRKISGA I+IS + S
Sbjct: 373 YDSMSSYSSSKLYGGLPPPSTLEMLVPANAVGKVLGKGGANIANIRKISGAMIEISDAKS 432

Query: 186 SRGDCVALISGTPEQKRAAENLVEAFIMST 275
           +RGD +A ISGTPEQKRAAENL++AFIM+T
Sbjct: 433 ARGDRIAHISGTPEQKRAAENLIQAFIMAT 462


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