BLASTX nr result

ID: Cnidium21_contig00013034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013034
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADZ76518.1| S-haplotype-specific F-box protein [Prunus pseudo...    85   4e-14
gb|ACR48155.1| S haplotype-specific F-box protein [Prunus dulcis]      83   1e-13
dbj|BAF36718.1| S locus F-box protein with the low allelic seque...    78   4e-12
dbj|BAC66628.1| F-box [Prunus mume]                                    77   6e-12
dbj|BAF36715.1| S locus F-box protein with the low allelic seque...    77   6e-12

>gb|ADZ76518.1| S-haplotype-specific F-box protein [Prunus pseudocerasus]
          Length = 377

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 74/283 (26%), Positives = 136/283 (48%), Gaps = 14/283 (4%)
 Frame = +3

Query: 36  SYGLICVSTMPWPIRLATPKIYLWNPLVQKYKTLPDSPLPFTDTKWKALAFGFVPEINDY 215
           S GL+C+S     I      I++WNP V+K++T P S        + AL FGF P +NDY
Sbjct: 114 SNGLVCISD---EILNFDSPIHIWNPSVKKFRTPPPSTNINIKFSYVALQFGFHPRVNDY 170

Query: 216 VVVQIVNPRLQPHPHSVIIGVYSLNTNSWKMLSQDNVFVR-TINLSDAVFINSAAFWVGV 392
             V++    ++ +  ++ + VYSL T+SWKM+     +++ +       F+N  A+ +  
Sbjct: 171 KAVRL----MRTNKSALAVEVYSLTTDSWKMIEVIPPWLKCSWKHHHGTFLNGIAYHI-- 224

Query: 393 SLDRRKI--VMCFDTKTNILREISLPNWVT-------HMPINPVIHLSGHSIAYFVWDDK 545
            +++  I  +M FD+      E  +P+ ++       H+    +  + G    Y   ++ 
Sbjct: 225 -IEKGPIFSIMSFDSGGEEFEEFIVPDAISSSWRLDIHVYKEQICLIFGF---YGCEEEG 280

Query: 546 YDYFDMWILKYDSINDFSWEKKMS-ISPNKDIRVEVLGVRNNGEPILAR---SYNLISYN 713
            + FD+W+LK     +  W++    I    D    V+G+  + E ++ R      ++  +
Sbjct: 281 MEKFDLWVLK-----EKRWKQLYPLIYDPLDYCYRVIGISIDNEFLMGRRAFEEGVVDLH 335

Query: 714 LDNHEAHDFVDSWDSWTPYRYYEEGFAPPFFISPFVESLVLLN 842
           L N+E+   +++       RY E GF    F + ++ESLVLLN
Sbjct: 336 LCNYESKKVLETGIKMAVMRYGEIGF---LFANTYIESLVLLN 375


>gb|ACR48155.1| S haplotype-specific F-box protein [Prunus dulcis]
          Length = 375

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 22/291 (7%)
 Frame = +3

Query: 36  SYGLICVSTMPWPIRLATPKIYLWNPLVQKYKTLPDSPLPFTDTKWKALAFGFVPEINDY 215
           S GL+C+S     I      I++WNP V+K +T P S          AL FGF   +NDY
Sbjct: 114 SNGLVCISD---EIMNFDSPIHIWNPSVKKLRTTPISTSINIKFSHVALQFGFHSGVNDY 170

Query: 216 VVVQIVNPRLQPHPHSVIIGVYSLNTNSWKMLSQDNVFVR-TINLSDAVFINSAAFWVGV 392
             V++    L+ + +++ + +YSL T+SW M+     +++ T       F N  A+ + +
Sbjct: 171 RAVRM----LRTNQNALAVEIYSLRTDSWTMIEAIPPWLKCTWQRHQGTFFNGVAYHI-I 225

Query: 393 SLDRRKIVMCFDTKTNILREISLPNWV-------THMPINPVIHLSGHSIAYFVWDDKYD 551
                  V+ FD+ +    E   P+ +        H+    +  L GH   Y   +D  +
Sbjct: 226 EKGPTFSVISFDSGSEEFEEFIAPDAICSLWRLCIHVYKEQICLLFGH---YSCEEDGME 282

Query: 552 YFDMWILK-----------YDSINDFSWEKKMSISPNKDIRVEVLGVRNNGEPILAR--- 689
             D+W+L+           YD ++DF                +++G+  + +PI+AR   
Sbjct: 283 NIDLWVLQEKRWKQLCPFIYDPLDDF---------------YQIIGISTDNKPIMARKDF 327

Query: 690 SYNLISYNLDNHEAHDFVDSWDSWTPYRYYEEGFAPPFFISPFVESLVLLN 842
           S   +   L N+E+   +++       RY E  F    F   +VESL+LLN
Sbjct: 328 SKGGVELQLGNYESKQVLETGIKLAIMRYGESEF---LFAMTYVESLLLLN 375


>dbj|BAF36718.1| S locus F-box protein with the low allelic sequence polymorphism
           3-Sf [Prunus mume]
          Length = 407

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 30/256 (11%)
 Frame = +3

Query: 42  GLICVSTMPWPIRLATPKIYLWNPLVQKYKTLPDSPLPFTDTKWKALAFGFVPEINDYVV 221
           GL C+S       L T ++  +NP +++++ LP S L   D     L FG+ P+  DYV+
Sbjct: 138 GLFCLS-------LYTGELVFYNPAIKEFRVLPQSCLE--DACSCTLGFGYDPKRKDYVL 188

Query: 222 VQIV--------NPRLQPHPHSVIIGVYSLNTNSWKMLSQDNVFVRTI----NLSDAVFI 365
           + IV        + RL  HP      +Y+L+TNSW+ +    +   T     N + + + 
Sbjct: 189 LSIVSYGEEIFDDERLVIHPPQA--EIYTLSTNSWREIETHYLETETTYFWGNETFSAYF 246

Query: 366 NSAAFWVG-------------VSLDRRKIVMCFDTKTNILREISLPNWVTHMPINPV-IH 503
           N   +W+G             +  +++++++ FDT   +   + LP+     P + + + 
Sbjct: 247 NGVFYWLGYEEKKEFVSFYDRLEEEKKQVIILFDTFDEVFHNMPLPDCFYEFPSHEMSLT 306

Query: 504 LSGHSIAYF-VWDDKYDYFDMWIL-KYDSINDFSWEKKMSISPNKDIRVEV-LGVRNNGE 674
           +   SIA F  +  +++ F++W++ ++D      W K +S+ P  D  V++ L +    E
Sbjct: 307 VWNESIALFGFYRCEFEPFEVWVMDEFD-----GWTKHLSVVPKVDQEVDIPLAIWRRNE 361

Query: 675 PILA-RSYNLISYNLD 719
            +L  R   + SYN D
Sbjct: 362 VLLVDRDGRIFSYNFD 377


>dbj|BAC66628.1| F-box [Prunus mume]
          Length = 397

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 30/256 (11%)
 Frame = +3

Query: 42  GLICVSTMPWPIRLATPKIYLWNPLVQKYKTLPDSPLPFTDTKWKALAFGFVPEINDYVV 221
           GL C+S       L T ++  +NP +++++ LP S L   D     L FG+ P+  DYV+
Sbjct: 128 GLFCLS-------LYTGELVFYNPAIKEFRVLPQSCLE--DACSCTLGFGYDPKRKDYVL 178

Query: 222 VQIV--------NPRLQPHPHSVIIGVYSLNTNSWKMLSQDNVFVRTI----NLSDAVFI 365
           + IV        + RL  HP      +Y+L+TNSW+ +    +   T     N + + + 
Sbjct: 179 LSIVSYGEEIFDDERLVIHPPQA--EIYTLSTNSWREIETHYLETETTYFWGNETFSAYF 236

Query: 366 NSAAFWVG-------------VSLDRRKIVMCFDTKTNILREISLPNWVTHMPINPV-IH 503
           N   +W+G             +  +++++++ FDT   +   + LP+     P + + + 
Sbjct: 237 NGVFYWLGYEEKKEFVSFYDRLEEEKKQVIILFDTFDEVFHNMPLPDCFYEFPSHEMSLT 296

Query: 504 LSGHSIAYF-VWDDKYDYFDMWIL-KYDSINDFSWEKKMSISPNKDIRVEV-LGVRNNGE 674
           +   SIA F  +  +++ F++W++ ++D      W K +S+ P  D  V++ L +    E
Sbjct: 297 VWNESIALFGFYRCEFEPFEVWVMDEFD-----GWTKHLSVVPKVDQEVDIPLALWRRNE 351

Query: 675 PILA-RSYNLISYNLD 719
            +L  R   + SYN D
Sbjct: 352 VLLVDRDGRIFSYNFD 367


>dbj|BAF36715.1| S locus F-box protein with the low allelic sequence polymorphism
           3-S4 [Prunus avium]
          Length = 416

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
 Frame = +3

Query: 42  GLICVSTMPWPIRLATPKIYLWNPLVQKYKTLPDSPLP--FTDTKWKALAFGFVPEINDY 215
           GL C+S       L T ++  +NP +++++ LP S L   F+ T    L FG+ P+  DY
Sbjct: 138 GLFCLS-------LYTGELVFYNPAIKEFRVLPQSCLENAFSCT----LGFGYDPKRKDY 186

Query: 216 VVVQIV--------NPRLQPHPHSVIIGVYSLNTNSWKMLSQDNVFVRTI----NLSDAV 359
           +++ +V        + RL  HP      +Y+L+TNSW+ +    +   T     N + + 
Sbjct: 187 ILLSVVSYGEEILDDERLVIHPPQA--EIYTLSTNSWRGIETHYLETETTYFWGNETFST 244

Query: 360 FINSAAFWVG-------------VSLDRRKIVMCFDTKTNILREISLPNWVTHMPINPV- 497
           + N   +W+G             +  ++ ++++ FDT   +   + LP+     P + + 
Sbjct: 245 YFNGVFYWLGYEEKKDFVSFYDRLEEEKTQVIILFDTFDEVFHNMPLPDCFYEFPTHEMS 304

Query: 498 IHLSGHSIAYF-VWDDKYDYFDMWIL-KYDSINDFSWEKKMSISPNKDIRVEV-LGVRNN 668
           + +   SIA F  +  +++ F++W++ ++D      W K +S+ P  D  V++ L +  N
Sbjct: 305 LTVWNESIALFGFYRCEFETFEVWVMDEFD-----GWTKHLSVVPKVDQEVDIPLALWRN 359

Query: 669 GEPILARSYNLISYNLD 719
              ++ R   + SYNLD
Sbjct: 360 EVLLVDRDGRIFSYNLD 376


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