BLASTX nr result

ID: Cnidium21_contig00013002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013002
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602313.1| ATPase family AAA domain-containing protein ...    70   2e-10
ref|XP_003602312.1| ATPase family AAA domain-containing protein ...    70   2e-10
gb|ACJ86310.1| unknown [Medicago truncatula] gi|388494120|gb|AFK...    70   2e-10
ref|XP_002869548.1| hypothetical protein ARALYDRAFT_492017 [Arab...    64   1e-08
ref|XP_003602314.1| Spastin [Medicago truncatula] gi|355491362|g...    64   2e-08

>ref|XP_003602313.1| ATPase family AAA domain-containing protein [Medicago truncatula]
           gi|355491361|gb|AES72564.1| ATPase family AAA
           domain-containing protein [Medicago truncatula]
          Length = 334

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
 Frame = -1

Query: 217 KFLQEVFLYAVTAAFGFWKILT----LDPRRRHASKKAPETKK---RRPSIKTIKTNSFE 59
           K LQ++ LYA  AA  +W ++T    LDP R  +SKKA E KK   +R     I+TNS+E
Sbjct: 8   KVLQDLLLYAARAALSYWVLVTGLRYLDPNRE-SSKKALEQKKEIAKRLGRPLIQTNSYE 66

Query: 58  DVIAGDVINPNKIEVEFDS 2
           DVIA DVINP+ I+VEFDS
Sbjct: 67  DVIACDVINPDHIDVEFDS 85


>ref|XP_003602312.1| ATPase family AAA domain-containing protein [Medicago truncatula]
           gi|355491360|gb|AES72563.1| ATPase family AAA
           domain-containing protein [Medicago truncatula]
          Length = 385

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
 Frame = -1

Query: 217 KFLQEVFLYAVTAAFGFWKILT----LDPRRRHASKKAPETKK---RRPSIKTIKTNSFE 59
           K LQ++ LYA  AA  +W ++T    LDP R  +SKKA E KK   +R     I+TNS+E
Sbjct: 8   KVLQDLLLYAARAALSYWVLVTGLRYLDPNRE-SSKKALEQKKEIAKRLGRPLIQTNSYE 66

Query: 58  DVIAGDVINPNKIEVEFDS 2
           DVIA DVINP+ I+VEFDS
Sbjct: 67  DVIACDVINPDHIDVEFDS 85


>gb|ACJ86310.1| unknown [Medicago truncatula] gi|388494120|gb|AFK35126.1| unknown
           [Medicago truncatula]
          Length = 284

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
 Frame = -1

Query: 217 KFLQEVFLYAVTAAFGFWKILT----LDPRRRHASKKAPETKK---RRPSIKTIKTNSFE 59
           K LQ++ LYA  AA  +W ++T    LDP R  +SKKA E KK   +R     I+TNS+E
Sbjct: 8   KVLQDLLLYAARAALSYWVLVTGLRYLDPNRE-SSKKALEQKKEIAKRLGRPLIQTNSYE 66

Query: 58  DVIAGDVINPNKIEVEFDS 2
           DVIA DVINP+ I+VEFDS
Sbjct: 67  DVIACDVINPDHIDVEFDS 85


>ref|XP_002869548.1| hypothetical protein ARALYDRAFT_492017 [Arabidopsis lyrata subsp.
           lyrata] gi|297315384|gb|EFH45807.1| hypothetical protein
           ARALYDRAFT_492017 [Arabidopsis lyrata subsp. lyrata]
          Length = 398

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/79 (53%), Positives = 50/79 (63%), Gaps = 7/79 (8%)
 Frame = -1

Query: 217 KFLQEVFLYAVTAAFG----FWKILTLDPRRRHASKKAPETKK---RRPSIKTIKTNSFE 59
           K LQE+ LYA +AAF     F  +  LDP R  ASKKA E KK   +R     ++TN +E
Sbjct: 8   KILQELILYAASAAFSCLVLFAGLRHLDPNRE-ASKKALEHKKEISKRLGRPLVQTNPYE 66

Query: 58  DVIAGDVINPNKIEVEFDS 2
           DVIA DVINP+ I VEFDS
Sbjct: 67  DVIACDVINPDHINVEFDS 85


>ref|XP_003602314.1| Spastin [Medicago truncatula] gi|355491362|gb|AES72565.1| Spastin
           [Medicago truncatula]
          Length = 396

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/79 (51%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
 Frame = -1

Query: 217 KFLQEVFLYAVTAAFGFWKILT----LDPRRRHASKKAPETKK---RRPSIKTIKTNSFE 59
           KF+ ++ L A +AAF    + T    LDP R+ +SKKA E KK    R     IKTN +E
Sbjct: 11  KFVTDLILLAASAAFSCLILYTGYSYLDPNRQ-SSKKALEHKKAIANRLGRPLIKTNQYE 69

Query: 58  DVIAGDVINPNKIEVEFDS 2
           DVIAGDVINP+ I+VEFDS
Sbjct: 70  DVIAGDVINPDHIDVEFDS 88


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