BLASTX nr result

ID: Cnidium21_contig00012977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012977
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625728.1| Chromodomain-helicase-DNA-binding protein [M...    60   2e-07
ref|XP_003560281.1| PREDICTED: uncharacterized protein LOC100835...    59   3e-07
ref|XP_003553568.1| PREDICTED: uncharacterized protein LOC100802...    59   3e-07
ref|XP_002439084.1| hypothetical protein SORBIDRAFT_10g031300 [S...    57   1e-06
gb|AFW69678.1| hypothetical protein ZEAMMB73_570325 [Zea mays]         56   3e-06

>ref|XP_003625728.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355500743|gb|AES81946.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 730

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
 Frame = +2

Query: 2   KNIDRVKD--VRWRLLCAK--SPNTEPILLSEATIIFREIFGTVDDTLSGGDLIQNMVFG 169
           K +D + D  VRWRLL  K  SP T P+LL EA  IF E F  + D +SG DLI+ MV+G
Sbjct: 541 KGLDPINDINVRWRLLSGKKASPETRPLLL-EAVSIFHECFDPIVDAVSGRDLIRAMVYG 599

Query: 170 KK---EKYSRMHCXXXXXXXXXXXXGLFRVLG 256
           K    +++  M+C            G+ R+ G
Sbjct: 600 KSVRGQEFGGMYCALLIVNSSVVSAGMLRIFG 631


>ref|XP_003560281.1| PREDICTED: uncharacterized protein LOC100835479 [Brachypodium
           distachyon]
          Length = 807

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
 Frame = +2

Query: 5   NIDRVKDVRWRLLCAKSPNTEPILLSEATIIFREIFGTVDDTLSGGDLIQNMVFGKK--- 175
           N D   DVRWR+L  KS     ++LS+A  IF E F  +  T +G DLI  MV+G+    
Sbjct: 562 NEDGDLDVRWRVLRDKSSEDSKLVLSKAVAIFHESFDPIIQTTTGRDLIPAMVYGRSVRD 621

Query: 176 EKYSRMHCXXXXXXXXXXXXGLFRVLGK 259
           + Y+ M+C            GLFR++G+
Sbjct: 622 QDYTGMYCAVLTVGNTVVSAGLFRIMGR 649


>ref|XP_003553568.1| PREDICTED: uncharacterized protein LOC100802562 [Glycine max]
          Length = 796

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
 Frame = +2

Query: 2   KNIDRVKDVRWRLLCAK--SPNTEPILLSEATIIFREIFGTVDDTLSGGDLIQNMVFGKK 175
           K ++ + DVRWRLL  K  SP T P+LL EA  IF E F  + D  SG DLI  MV+G+ 
Sbjct: 609 KGLEPIIDVRWRLLNGKIASPETRPLLL-EAVSIFHECFNPIVDAASGRDLIPAMVYGRN 667

Query: 176 ---EKYSRMHCXXXXXXXXXXXXGLFRVLG 256
              +++  M+C            G+ R+ G
Sbjct: 668 VRGQEFGGMYCALLIVNSSVVSAGMLRIFG 697


>ref|XP_002439084.1| hypothetical protein SORBIDRAFT_10g031300 [Sorghum bicolor]
           gi|241917307|gb|EER90451.1| hypothetical protein
           SORBIDRAFT_10g031300 [Sorghum bicolor]
          Length = 880

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = +2

Query: 5   NIDRVKDVRWRLLCAKSPNTEPILLSEATIIFREIFGTVDDTLSGGDLIQNMVFGKK--- 175
           N D   DVRWR+L  KS +   ++LS+A  IF E F  +    +G DLI  MV+G+    
Sbjct: 701 NEDADLDVRWRVLKDKSSDDSKLVLSKAVAIFHETFDPIIQVSTGRDLIPAMVYGRSARD 760

Query: 176 EKYSRMHCXXXXXXXXXXXXGLFRVLG 256
           + Y+ M+C            GLFR++G
Sbjct: 761 QDYTGMYCAVLTVNNTVVSAGLFRIMG 787


>gb|AFW69678.1| hypothetical protein ZEAMMB73_570325 [Zea mays]
          Length = 341

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +2

Query: 23  DVRWRLLCAKSPNTEPILLSEATIIFREIFGTVDDTLSGGDLIQNMVFGKK---EKYSRM 193
           DVRWR+L  KS +   ++LS+A  IF E F  +    +G DLI  MV+G+    + Y+ M
Sbjct: 168 DVRWRVLKDKSSDDSKLVLSKAVAIFHETFDPIIQVSTGRDLIPAMVYGRSARDQDYTGM 227

Query: 194 HCXXXXXXXXXXXXGLFRVLG 256
           +C            GLFR++G
Sbjct: 228 YCTVLTVNNIVVSAGLFRIMG 248


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