BLASTX nr result
ID: Cnidium21_contig00012920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00012920 (360 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003611337.1| DNA mismatch repair protein mutS [Medicago t... 182 2e-44 ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|2... 182 2e-44 ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis t... 181 5e-44 gb|AAT70180.1| MSH4 [Arabidopsis thaliana] 181 5e-44 ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc... 180 9e-44 >ref|XP_003611337.1| DNA mismatch repair protein mutS [Medicago truncatula] gi|355512672|gb|AES94295.1| DNA mismatch repair protein mutS [Medicago truncatula] Length = 800 Score = 182 bits (462), Expect = 2e-44 Identities = 87/119 (73%), Positives = 103/119 (86%) Frame = -2 Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180 MDAIR VSA LDMIVNSFA+MISTKPVD+YTRP+FT+NGP+AID+GRHPI Sbjct: 483 MDAIRENVSALTLLAEILCLLDMIVNSFAHMISTKPVDQYTRPEFTENGPMAIDSGRHPI 542 Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3 LES+HN+F+ N++FLSEASN+ IV GPNMSGKSTYLQQVCLIVI+AQ+GCY+PA F+TL Sbjct: 543 LESIHNDFVANNIFLSEASNMAIVTGPNMSGKSTYLQQVCLIVIIAQVGCYVPARFSTL 601 >ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|222833784|gb|EEE72261.1| predicted protein [Populus trichocarpa] Length = 700 Score = 182 bits (462), Expect = 2e-44 Identities = 87/119 (73%), Positives = 103/119 (86%) Frame = -2 Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180 +++IR + SA LDMI+NSFA ISTKPVD+YTRP+FT NGPLAIDAGRHPI Sbjct: 376 LNSIREDASALTLLAEVLCLLDMIINSFAYTISTKPVDRYTRPEFTSNGPLAIDAGRHPI 435 Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3 LES+HN+F+PN++FLSEASN+VIVMGPNMSGKSTYLQQVCLIVILAQIGCY+PA F+T+ Sbjct: 436 LESIHNDFVPNNIFLSEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFSTI 494 >ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis thaliana] gi|395406788|sp|F4JP48.1|MSH4_ARATH RecName: Full=DNA mismatch repair protein MSH4; Short=AtMSH4; AltName: Full=MutS protein homolog 4 gi|332658482|gb|AEE83882.1| DNA mismatch repair protein MSH4 [Arabidopsis thaliana] Length = 792 Score = 181 bits (459), Expect = 5e-44 Identities = 85/119 (71%), Positives = 104/119 (87%) Frame = -2 Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180 MDAIR ++SA LDMIVNSFA+ ISTKPVD+Y+RP+ TD+GPLAIDAGRHPI Sbjct: 468 MDAIREDISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHPI 527 Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3 LES+HN+F+ NS+F+SEA+N+++VMGPNMSGKSTYLQQVCL+VILAQIGCY+PA FAT+ Sbjct: 528 LESIHNDFVSNSIFMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATI 586 >gb|AAT70180.1| MSH4 [Arabidopsis thaliana] Length = 792 Score = 181 bits (459), Expect = 5e-44 Identities = 85/119 (71%), Positives = 104/119 (87%) Frame = -2 Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180 MDAIR ++SA LDMIVNSFA+ ISTKPVD+Y+RP+ TD+GPLAIDAGRHPI Sbjct: 468 MDAIREDISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHPI 527 Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3 LES+HN+F+ NS+F+SEA+N+++VMGPNMSGKSTYLQQVCL+VILAQIGCY+PA FAT+ Sbjct: 528 LESIHNDFVSNSIFMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATI 586 >ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max] Length = 794 Score = 180 bits (457), Expect = 9e-44 Identities = 86/119 (72%), Positives = 102/119 (85%) Frame = -2 Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180 MD IR VS LDMIVNSFA+MISTKPVD+YTRP+FT+NGPLAID+GRHPI Sbjct: 468 MDDIRENVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGRHPI 527 Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3 LES+HN+F+ N++FL+EASN+ IVMGPNMSGKSTYLQQVCLIVILAQ+GCY+PA F+T+ Sbjct: 528 LESIHNDFVANNIFLTEASNMAIVMGPNMSGKSTYLQQVCLIVILAQVGCYVPARFSTV 586