BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012920
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611337.1| DNA mismatch repair protein mutS [Medicago t...   182   2e-44
ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis t...   181   5e-44
gb|AAT70180.1| MSH4 [Arabidopsis thaliana]                            181   5e-44
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   180   9e-44

>ref|XP_003611337.1| DNA mismatch repair protein mutS [Medicago truncatula]
           gi|355512672|gb|AES94295.1| DNA mismatch repair protein
           mutS [Medicago truncatula]
          Length = 800

 Score =  182 bits (462), Expect = 2e-44
 Identities = 87/119 (73%), Positives = 103/119 (86%)
 Frame = -2

Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180
           MDAIR  VSA          LDMIVNSFA+MISTKPVD+YTRP+FT+NGP+AID+GRHPI
Sbjct: 483 MDAIRENVSALTLLAEILCLLDMIVNSFAHMISTKPVDQYTRPEFTENGPMAIDSGRHPI 542

Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3
           LES+HN+F+ N++FLSEASN+ IV GPNMSGKSTYLQQVCLIVI+AQ+GCY+PA F+TL
Sbjct: 543 LESIHNDFVANNIFLSEASNMAIVTGPNMSGKSTYLQQVCLIVIIAQVGCYVPARFSTL 601


>ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|222833784|gb|EEE72261.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score =  182 bits (462), Expect = 2e-44
 Identities = 87/119 (73%), Positives = 103/119 (86%)
 Frame = -2

Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180
           +++IR + SA          LDMI+NSFA  ISTKPVD+YTRP+FT NGPLAIDAGRHPI
Sbjct: 376 LNSIREDASALTLLAEVLCLLDMIINSFAYTISTKPVDRYTRPEFTSNGPLAIDAGRHPI 435

Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3
           LES+HN+F+PN++FLSEASN+VIVMGPNMSGKSTYLQQVCLIVILAQIGCY+PA F+T+
Sbjct: 436 LESIHNDFVPNNIFLSEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFSTI 494


>ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
           gi|395406788|sp|F4JP48.1|MSH4_ARATH RecName: Full=DNA
           mismatch repair protein MSH4; Short=AtMSH4; AltName:
           Full=MutS protein homolog 4 gi|332658482|gb|AEE83882.1|
           DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
          Length = 792

 Score =  181 bits (459), Expect = 5e-44
 Identities = 85/119 (71%), Positives = 104/119 (87%)
 Frame = -2

Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180
           MDAIR ++SA          LDMIVNSFA+ ISTKPVD+Y+RP+ TD+GPLAIDAGRHPI
Sbjct: 468 MDAIREDISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHPI 527

Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3
           LES+HN+F+ NS+F+SEA+N+++VMGPNMSGKSTYLQQVCL+VILAQIGCY+PA FAT+
Sbjct: 528 LESIHNDFVSNSIFMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATI 586


>gb|AAT70180.1| MSH4 [Arabidopsis thaliana]
          Length = 792

 Score =  181 bits (459), Expect = 5e-44
 Identities = 85/119 (71%), Positives = 104/119 (87%)
 Frame = -2

Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180
           MDAIR ++SA          LDMIVNSFA+ ISTKPVD+Y+RP+ TD+GPLAIDAGRHPI
Sbjct: 468 MDAIREDISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHPI 527

Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3
           LES+HN+F+ NS+F+SEA+N+++VMGPNMSGKSTYLQQVCL+VILAQIGCY+PA FAT+
Sbjct: 528 LESIHNDFVSNSIFMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATI 586


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  180 bits (457), Expect = 9e-44
 Identities = 86/119 (72%), Positives = 102/119 (85%)
 Frame = -2

Query: 359 MDAIRMEVSAXXXXXXXXXXLDMIVNSFANMISTKPVDKYTRPQFTDNGPLAIDAGRHPI 180
           MD IR  VS           LDMIVNSFA+MISTKPVD+YTRP+FT+NGPLAID+GRHPI
Sbjct: 468 MDDIRENVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGRHPI 527

Query: 179 LESVHNEFIPNSLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPADFATL 3
           LES+HN+F+ N++FL+EASN+ IVMGPNMSGKSTYLQQVCLIVILAQ+GCY+PA F+T+
Sbjct: 528 LESIHNDFVANNIFLTEASNMAIVMGPNMSGKSTYLQQVCLIVILAQVGCYVPARFSTV 586