BLASTX nr result

ID: Cnidium21_contig00012883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012883
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g...    76   4e-12
emb|CBI38228.3| unnamed protein product [Vitis vinifera]               76   4e-12
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...    76   4e-12
emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]    76   4e-12
ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g...    75   1e-11

>ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 710

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 36/74 (48%), Positives = 53/74 (71%)
 Frame = -2

Query: 439 SLMKGSIEVFEVPEQVLSCVYGESGSNLARIKQISGASIVIEDPCAGKSYRNVIISGTLH 260
           +++  +I    VP+  + CVYGE+GSNLAR++QISGA++V+ +P  G S R ++ISGT  
Sbjct: 634 AIVTNTIVEIVVPDDTIDCVYGENGSNLARLRQISGANVVVHEPRPGTSDRIIVISGTPD 693

Query: 259 SIMVARSLLQAFML 218
               A+SLLQAF+L
Sbjct: 694 ETQAAQSLLQAFIL 707


>emb|CBI38228.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 18/142 (12%)
 Frame = -2

Query: 592 GSDNQIGFSPT-DHDMSLIQEMDRLGLF-------------DESVKGYETKDPTDTSGGF 455
           G  + +G SP+     +L Q MD LGL               ++V G    +P +  GG 
Sbjct: 436 GLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGV---NPRNIKGGI 492

Query: 454 ----GTNEISLMKGSIEVFEVPEQVLSCVYGESGSNLARIKQISGASIVIEDPCAGKSYR 287
               G+    +   ++E+  +PE V+  VYGE+G+NLAR+++ISGA + + +P  G S R
Sbjct: 493 ELGSGSKSAIITNTTVEIV-IPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDR 551

Query: 286 NVIISGTLHSIMVARSLLQAFM 221
            VIISGT      A+SLLQAF+
Sbjct: 552 IVIISGTPDETQAAQSLLQAFI 573


>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 18/142 (12%)
 Frame = -2

Query: 592 GSDNQIGFSPT-DHDMSLIQEMDRLGLF-------------DESVKGYETKDPTDTSGGF 455
           G  + +G SP+     +L Q MD LGL               ++V G    +P +  GG 
Sbjct: 499 GLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGV---NPRNIKGGI 555

Query: 454 ----GTNEISLMKGSIEVFEVPEQVLSCVYGESGSNLARIKQISGASIVIEDPCAGKSYR 287
               G+    +   ++E+  +PE V+  VYGE+G+NLAR+++ISGA + + +P  G S R
Sbjct: 556 ELGSGSKSAIITNTTVEIV-IPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDR 614

Query: 286 NVIISGTLHSIMVARSLLQAFM 221
            VIISGT      A+SLLQAF+
Sbjct: 615 IVIISGTPDETQAAQSLLQAFI 636


>emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
          Length = 569

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 18/142 (12%)
 Frame = -2

Query: 592 GSDNQIGFSPT-DHDMSLIQEMDRLGLF-------------DESVKGYETKDPTDTSGGF 455
           G  + +G SP+     +L Q MD LGL               ++V G    +P +  GG 
Sbjct: 420 GLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGV---NPRNIKGGI 476

Query: 454 ----GTNEISLMKGSIEVFEVPEQVLSCVYGESGSNLARIKQISGASIVIEDPCAGKSYR 287
               G+    +   ++E+  +PE V+  VYGE+G+NLAR+++ISGA + + +P  G S R
Sbjct: 477 ELGSGSKSAIITNTTVEIV-IPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDR 535

Query: 286 NVIISGTLHSIMVARSLLQAFM 221
            VIISGT      A+SLLQAF+
Sbjct: 536 IVIISGTPDETQAAQSLLQAFI 557


>ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 591

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
 Frame = -2

Query: 577 IGFSPTDHDMSLIQEMDRLGLFDESVKGYETKDPTDTSGGF---GTNEISLMKGSIEVFE 407
           +  S   H +  +Q    +   +  V    ++  T   GG      ++ +++  +     
Sbjct: 465 VSLSLNRHSLPGLQAPQTVAGINSRVTNGVSRGLTSQKGGLELVSGSKTAIVTNTTVQIA 524

Query: 406 VPEQVLSCVYGESGSNLARIKQISGASIVIEDPCAGKSYRNVIISGTLHSIMVARSLLQA 227
           VP+ V+  VYGE+GSNLAR++QISGA +++ +P  G S R +IISGT      A+SLLQA
Sbjct: 525 VPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQA 584

Query: 226 FML 218
           F+L
Sbjct: 585 FIL 587


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