BLASTX nr result

ID: Cnidium21_contig00012859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012859
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27073.3| unnamed protein product [Vitis vinifera]              361   2e-97
ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Viti...   361   2e-97
ref|XP_002315961.1| predicted protein [Populus trichocarpa] gi|2...   354   2e-95
ref|XP_002311433.1| predicted protein [Populus trichocarpa] gi|2...   354   2e-95
ref|XP_002524402.1| DNA binding protein, putative [Ricinus commu...   342   6e-92

>emb|CBI27073.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  361 bits (926), Expect = 2e-97
 Identities = 204/299 (68%), Positives = 231/299 (77%), Gaps = 13/299 (4%)
 Frame = -2

Query: 950 SNMMFPEV----MPWNIP--HGFNPVHFQTSPIMDHDPFLLPPQPPSQYXXXXXGMFNRR 789
           S ++FPEV     PW+ P  H FNP HF  +P+ DHDPFL+PP PPS Y      +FNRR
Sbjct: 16  SGLIFPEVSPILQPWSFPPVHAFNPAHFAANPVRDHDPFLVPP-PPSAYGS----VFNRR 70

Query: 788 SFG---NYDGSSSDHLRFLSDTVLGQMVHQPCGVPFGLQAELGKLTAQEIMDAKALXXXX 618
           +      Y+G SS+HLR +SDT LG +V QP   PFGLQAELGK+TAQEIMDAKAL    
Sbjct: 71  APALQFAYEGPSSEHLRIISDT-LGPVV-QPGSSPFGLQAELGKMTAQEIMDAKALAASK 128

Query: 617 XXXXXXXXXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESSPVP 438
                      RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS+IAESSPVP
Sbjct: 129 SHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVP 188

Query: 437 TESDELSVENEADEDGRFVIKASICCEDRTDLLSDLIKTLKAMRLRTLKAEITTLGGRVK 258
           TE DEL+V+  +DEDG+FVIKAS+CCEDRTDLL DLIKTLKA+RLRTLKAEITTLGGRVK
Sbjct: 189 TEMDELTVDT-SDEDGKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVK 247

Query: 257 NVLFITGDDQESSCDD----EQMQPHEYSISSIQEALKAVMEKSNGDESSPGTVKRQRT 93
           NVLFITG++  SS  +    +Q Q  +YSISSIQEALKAVMEK+ GDESS G+VKRQRT
Sbjct: 248 NVLFITGEEDSSSSGENQQQQQQQQQQYSISSIQEALKAVMEKTGGDESSSGSVKRQRT 306


>ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 349

 Score =  361 bits (926), Expect = 2e-97
 Identities = 204/299 (68%), Positives = 231/299 (77%), Gaps = 13/299 (4%)
 Frame = -2

Query: 950 SNMMFPEV----MPWNIP--HGFNPVHFQTSPIMDHDPFLLPPQPPSQYXXXXXGMFNRR 789
           S ++FPEV     PW+ P  H FNP HF  +P+ DHDPFL+PP PPS Y      +FNRR
Sbjct: 49  SGLIFPEVSPILQPWSFPPVHAFNPAHFAANPVRDHDPFLVPP-PPSAYGS----VFNRR 103

Query: 788 SFG---NYDGSSSDHLRFLSDTVLGQMVHQPCGVPFGLQAELGKLTAQEIMDAKALXXXX 618
           +      Y+G SS+HLR +SDT LG +V QP   PFGLQAELGK+TAQEIMDAKAL    
Sbjct: 104 APALQFAYEGPSSEHLRIISDT-LGPVV-QPGSSPFGLQAELGKMTAQEIMDAKALAASK 161

Query: 617 XXXXXXXXXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESSPVP 438
                      RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS+IAESSPVP
Sbjct: 162 SHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVP 221

Query: 437 TESDELSVENEADEDGRFVIKASICCEDRTDLLSDLIKTLKAMRLRTLKAEITTLGGRVK 258
           TE DEL+V+  +DEDG+FVIKAS+CCEDRTDLL DLIKTLKA+RLRTLKAEITTLGGRVK
Sbjct: 222 TEMDELTVDT-SDEDGKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVK 280

Query: 257 NVLFITGDDQESSCDD----EQMQPHEYSISSIQEALKAVMEKSNGDESSPGTVKRQRT 93
           NVLFITG++  SS  +    +Q Q  +YSISSIQEALKAVMEK+ GDESS G+VKRQRT
Sbjct: 281 NVLFITGEEDSSSSGENQQQQQQQQQQYSISSIQEALKAVMEKTGGDESSSGSVKRQRT 339


>ref|XP_002315961.1| predicted protein [Populus trichocarpa] gi|222865001|gb|EEF02132.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  354 bits (908), Expect = 2e-95
 Identities = 201/298 (67%), Positives = 229/298 (76%), Gaps = 12/298 (4%)
 Frame = -2

Query: 950 SNMMFPEV---MPWNIP--HGFNPVHFQTS-PIMDHDPFLLPPQPPSQYXXXXXGMFNRR 789
           S  +FPEV   +PW +P  H FNP HF  + P+ DHDPFL+PP  PS Y      +FNRR
Sbjct: 52  SGFIFPEVSPILPWPLPPVHSFNPAHFTPNHPVRDHDPFLIPPPVPSSYGG----LFNRR 107

Query: 788 SFG---NYDGSSSDHLRFLSDTVLGQMVHQPCGVPFGLQAELGKLTAQEIMDAKALXXXX 618
           +      YDG+ SDHLR +SDT LG +V QP   PFGLQAEL K+TAQEIMDAKAL    
Sbjct: 108 APSLQFAYDGTPSDHLRIISDT-LGPVV-QPGSAPFGLQAELSKMTAQEIMDAKALAASK 165

Query: 617 XXXXXXXXXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESSPVP 438
                      RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT++IAE+SPVP
Sbjct: 166 SHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIAETSPVP 225

Query: 437 TESDELSVENEADEDGRFVIKASICCEDRTDLLSDLIKTLKAMRLRTLKAEITTLGGRVK 258
           TE DEL+V+  ADEDG+FVIKAS+CCEDR DLL DLIKTLKA+RLRTLKAEITTLGGRVK
Sbjct: 226 TEMDELTVDT-ADEDGKFVIKASLCCEDRPDLLPDLIKTLKALRLRTLKAEITTLGGRVK 284

Query: 257 NVLFITGDDQESSCDDEQMQ---PHEYSISSIQEALKAVMEKSNGDESSPGTVKRQRT 93
           NVLFI+G++  SS  ++Q Q   P +YSISSIQEALKAVMEK+ GDESS G+VKRQRT
Sbjct: 285 NVLFISGEEDSSSDSNDQHQQQEPLQYSISSIQEALKAVMEKTGGDESSSGSVKRQRT 342


>ref|XP_002311433.1| predicted protein [Populus trichocarpa] gi|222851253|gb|EEE88800.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  354 bits (908), Expect = 2e-95
 Identities = 200/298 (67%), Positives = 231/298 (77%), Gaps = 12/298 (4%)
 Frame = -2

Query: 950 SNMMFPEV---MPWNIP--HGFNPVHFQTS-PIMDHDPFLLPPQPPSQYXXXXXGMFNRR 789
           S ++FPEV   +PW +P  H FNP HF ++ P+ DHDPFL+PP  PS Y      +FNRR
Sbjct: 50  SGLIFPEVSPILPWPLPPAHSFNPDHFTSNHPVRDHDPFLIPPPIPSSYGG----LFNRR 105

Query: 788 SFG---NYDGSSSDHLRFLSDTVLGQMVHQPCGVPFGLQAELGKLTAQEIMDAKALXXXX 618
           S      YDG+SSDHLR +S+T LG +V QP   PFGLQAEL  +TAQEIMDAKAL    
Sbjct: 106 SPSLQFAYDGTSSDHLRIISET-LGPVV-QPGSAPFGLQAELSNMTAQEIMDAKALAASK 163

Query: 617 XXXXXXXXXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESSPVP 438
                      RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS+IAE+SPVP
Sbjct: 164 SHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVP 223

Query: 437 TESDELSVENEADEDGRFVIKASICCEDRTDLLSDLIKTLKAMRLRTLKAEITTLGGRVK 258
           TE DEL+V+  ADEDG+FV+KAS+CCEDR+DLL DLIKTLKA+RLRTLKAEITTLGGRVK
Sbjct: 224 TEMDELTVDT-ADEDGKFVLKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVK 282

Query: 257 NVLFITGDDQESSCDD---EQMQPHEYSISSIQEALKAVMEKSNGDESSPGTVKRQRT 93
           NVLFI G++  SS  +   +Q QP +YSISSIQEALK+VMEK+ GDESS G+VKRQRT
Sbjct: 283 NVLFIAGEEDSSSDSNDHQQQQQPLQYSISSIQEALKSVMEKTGGDESSSGSVKRQRT 340


>ref|XP_002524402.1| DNA binding protein, putative [Ricinus communis]
           gi|223536363|gb|EEF38013.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 367

 Score =  342 bits (878), Expect = 6e-92
 Identities = 203/307 (66%), Positives = 230/307 (74%), Gaps = 21/307 (6%)
 Frame = -2

Query: 950 SNMMFPEV---MPWNIP--HGFNP---------VHFQTSPIMDHDPFLLPPQPPSQYXXX 813
           S ++FPEV   +PW +P  H FNP         VH        HDPFL+PP  PS Y   
Sbjct: 51  SGLIFPEVSPILPWPLPPVHSFNPAMTQFPSNQVHHHHHHRDHHDPFLIPPPVPSSYGN- 109

Query: 812 XXGMFNRRSFG---NYDGSSS-DHLRFLSDTVLGQMVHQPCGVPFGLQAELGKLTAQEIM 645
              +FNRR+      YDGSSS DHLR ++DT LG +V QP   PFGLQAELGK+TAQEIM
Sbjct: 110 ---LFNRRAPALQFAYDGSSSHDHLRIITDT-LGPVV-QPGSAPFGLQAELGKMTAQEIM 164

Query: 644 DAKALXXXXXXXXXXXXXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS 465
           DAKAL               RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS
Sbjct: 165 DAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS 224

Query: 464 IIAESSPVPTESDELSVENEADEDGRFVIKASICCEDRTDLLSDLIKTLKAMRLRTLKAE 285
           +IAE+SPVPTE DEL+V+  +DEDG+F+IKAS+CCEDR+DLL DLIKTLKA+RLRTLKAE
Sbjct: 225 LIAETSPVPTEIDELTVD-ASDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAE 283

Query: 284 ITTLGGRVKNVLFITGDDQESSC---DDEQMQPHEYSISSIQEALKAVMEKSNGDESSPG 114
           ITTLGGRVKNVLFITG++  SS    +D+Q QP +YSISSIQEALKAVMEKS GDESS G
Sbjct: 284 ITTLGGRVKNVLFITGEEDSSSNSNEEDQQQQP-QYSISSIQEALKAVMEKSGGDESSSG 342

Query: 113 TVKRQRT 93
           +VKRQRT
Sbjct: 343 SVKRQRT 349


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