BLASTX nr result

ID: Cnidium21_contig00012844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012844
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309562.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002309701.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002338159.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002336216.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arab...    65   2e-11

>ref|XP_002309562.1| predicted protein [Populus trichocarpa] gi|222855538|gb|EEE93085.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = +3

Query: 6   SLCKQGLVDDALNLHSEMMEKGILPNVWTYNTIIQVLCNFNRWEEVSMFLKQMTEDLNIT 185
           SLCK  LV++AL++ S M  K I P+++TYN++IQ LCNF RW+E S  L +MT  LNI 
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMT-SLNIM 302

Query: 186 PDVHTFNI 209
           P++ TFN+
Sbjct: 303 PNIFTFNV 310


>ref|XP_002309701.1| predicted protein [Populus trichocarpa] gi|222855677|gb|EEE93224.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/68 (51%), Positives = 50/68 (73%)
 Frame = +3

Query: 6   SLCKQGLVDDALNLHSEMMEKGILPNVWTYNTIIQVLCNFNRWEEVSMFLKQMTEDLNIT 185
           SLC+  LV++AL++ S M  KGI P+++TY ++IQ LC F+RW+E S  L +MT  LNI 
Sbjct: 242 SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMT-SLNIM 300

Query: 186 PDVHTFNI 209
           PD+ TFN+
Sbjct: 301 PDIVTFNV 308


>ref|XP_002338159.1| predicted protein [Populus trichocarpa] gi|222871069|gb|EEF08200.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = +3

Query: 6   SLCKQGLVDDALNLHSEMMEKGILPNVWTYNTIIQVLCNFNRWEEVSMFLKQMTEDLNIT 185
           SLCK   V++AL++ S M  KGI PN++TYN++IQ LCNF+RW E S  L +M   LNI 
Sbjct: 54  SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMM-SLNIM 112

Query: 186 PDVHTFNI 209
           P++ TF++
Sbjct: 113 PNIVTFSL 120


>ref|XP_002336216.1| predicted protein [Populus trichocarpa] gi|222832672|gb|EEE71149.1|
           predicted protein [Populus trichocarpa]
          Length = 616

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = +3

Query: 6   SLCKQGLVDDALNLHSEMMEKGILPNVWTYNTIIQVLCNFNRWEEVSMFLKQMTEDLNIT 185
           SLCK   V++AL++ S M  KGI PN++TYN++IQ LCNF+RW E S  L +M   LNI 
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMM-SLNIM 329

Query: 186 PDVHTFNI 209
           P++ TF++
Sbjct: 330 PNIVTFSL 337


>ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata] gi|297332289|gb|EFH62707.1| hypothetical protein
           ARALYDRAFT_475066 [Arabidopsis lyrata subsp. lyrata]
          Length = 332

 Score = 65.5 bits (158), Expect(2) = 2e-11
 Identities = 31/75 (41%), Positives = 44/75 (58%)
 Frame = +3

Query: 9   LCKQGLVDDALNLHSEMMEKGILPNVWTYNTIIQVLCNFNRWEEVSMFLKQMTEDLNITP 188
           LCK G    A NL +EM +KGI PNV TYN +I   C++ +W +    L+ M E  N+ P
Sbjct: 90  LCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIES-NVDP 148

Query: 189 DVHTFNISLRSWTMQ 233
           DV TFN  + ++  +
Sbjct: 149 DVVTFNALINAFVKE 163



 Score = 28.1 bits (61), Expect(2) = 2e-11
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 209 KSEKLDDATHIIQIMNERGEYPNI 280
           K  +LDDA HI  +M  +G  PN+
Sbjct: 197 KHSRLDDAKHIFDLMVSKGGSPNV 220


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