BLASTX nr result

ID: Cnidium21_contig00012837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012837
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305617.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002317214.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002518540.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
emb|CBI23166.3| unnamed protein product [Vitis vinifera]               60   1e-07

>ref|XP_002305617.1| predicted protein [Populus trichocarpa] gi|222848581|gb|EEE86128.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 15/129 (11%)
 Frame = -2

Query: 342 GLQYTSNKSDSFVLEMERFSHLSSKNVSPNSRITCK--LSRKGS------GCEKKMNRDA 187
           G QYT  KSDSF+++ME FSH  +K+++ N RIT +  LSRKGS      G EKK++ + 
Sbjct: 29  GFQYTKEKSDSFIIDMESFSHGINKDINTNQRITLQRNLSRKGSPRGGGGGGEKKIHSNL 88

Query: 186 DN--EKAAKLVDS-----NTPEKPILVTVGATNYPFXXXXXXXXXXXXXXXXXXTESKLC 28
            +  +K A +  +     +TPEK  +VTVG  ++                     E + C
Sbjct: 89  SHLCDKEAIVASASPRGPSTPEKAAVVTVGTPDHSSSPQVHHQITITTGSINGTPEGR-C 147

Query: 27  SKRNSFKRS 1
            +RNSFKR+
Sbjct: 148 IRRNSFKRA 156


>ref|XP_002317214.1| predicted protein [Populus trichocarpa] gi|222860279|gb|EEE97826.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 52/131 (39%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
 Frame = -2

Query: 342 GLQYTSNKSDSFVLEMERFSHLSSKNVSPNSRITCKLS-------RKGSGCEKKMN---- 196
           G Q T  KSDSFV++MERFSH  +K+ + NSRIT + S       R G G EKK+N    
Sbjct: 32  GFQCTKEKSDSFVIDMERFSHGINKDSNTNSRITLQRSHSRKGSPRGGGGGEKKINSNLS 91

Query: 195 ------RDADNEKAAKLVDSNTPEKPILVTVGATNYPFXXXXXXXXXXXXXXXXXXTESK 34
                 RDA    A+    S TPEK   VTVG  ++                     ES+
Sbjct: 92  HLSVSDRDAIVASASPRGPS-TPEKAAAVTVGTADHSSSPQLHHQITITTGNMNATPESR 150

Query: 33  LCSKRNSFKRS 1
            C +RNSFKRS
Sbjct: 151 -CIRRNSFKRS 160


>ref|XP_002518540.1| conserved hypothetical protein [Ricinus communis]
           gi|223542385|gb|EEF43927.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 214

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 18/131 (13%)
 Frame = -2

Query: 342 GLQYTSNKSDSFVLEMERFSH-LSSKNVSPNSRITCK--LSRKGS------GCEKKMNRD 190
           G +Y++ KSD+FV++ME FSH  ++K V+PNSRIT +  LSRKGS      G +KK+N +
Sbjct: 39  GFEYSAEKSDNFVIDMESFSHATNNKEVNPNSRITLQRSLSRKGSLRMSGRGGDKKINSN 98

Query: 189 -ADNEKAAKLVDSN-----TPEKPILVTVGATNYP---FXXXXXXXXXXXXXXXXXXTES 37
            + N++ A +  S+      PEK  +V+VG  ++P                      TE 
Sbjct: 99  PSPNDRDAAVATSSPRGPGMPEKGSMVSVGTADHPSSSAQVHHQITITTTNNLNASSTEG 158

Query: 36  KLCSKRNSFKR 4
           +   +RNSFKR
Sbjct: 159 RCTIRRNSFKR 169


>emb|CBI23166.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
 Frame = -2

Query: 342 GLQYTSNKSDSFVLEMERFSHLSSKNVSPNSRITCK--LSRKGS--GCEKKMNR----DA 187
           G QY + KSDSFV++ME F +  +K+ + NSRIT +  LSRKGS  G EKK N     DA
Sbjct: 17  GFQYKTEKSDSFVVDMEGFPNGVNKDTTANSRITLQRSLSRKGSQRGGEKKPNSVASIDA 76

Query: 186 D-----NEKAAKLVDSNTPEKPILVTVGAT-------NYPFXXXXXXXXXXXXXXXXXXT 43
           D     +   A L   +T EKP+ V V A        ++P                   T
Sbjct: 77  DAVLATSSPRAALAGGSTLEKPVAVVVAAAAAGGTIDHHPVGSQVHHHIAITAGNISTIT 136

Query: 42  ESKLCSKRNSFKRS 1
           ES+  S+R SF+R+
Sbjct: 137 ESRFISRRYSFRRA 150


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