BLASTX nr result

ID: Cnidium21_contig00012808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012808
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37201.3| unnamed protein product [Vitis vinifera]              135   5e-30
ref|XP_002269589.1| PREDICTED: ABC transporter C family member 5...   135   5e-30
ref|XP_002301841.1| multidrug resistance protein ABC transporter...   135   5e-30
ref|XP_002526533.1| multidrug resistance-associated protein 2, 6...   133   1e-29
ref|XP_002321297.1| multidrug resistance protein ABC transporter...   122   2e-26

>emb|CBI37201.3| unnamed protein product [Vitis vinifera]
          Length = 1360

 Score =  135 bits (339), Expect = 5e-30
 Identities = 70/114 (61%), Positives = 85/114 (74%)
 Frame = -1

Query: 345 ICINLTLVLVLLFIVSARQIVVCLGRIRVDKEGSNRNSVPIRCSRDGDIQNIVIRRWYKA 166
           ICINLTL LV LFIVSARQ  VC+GR+R+ K+ S  NS PIR S D +I++I I + + A
Sbjct: 38  ICINLTLFLVFLFIVSARQFFVCIGRVRIIKDDSGANSNPIRRSIDREIRDIEIGKGFIA 97

Query: 165 SAFCCFYVLFLQVLVLGFDGIGLIRESARGKSINWTLVLSPAAQSLAWFLLSFS 4
           +  CCFYVL LQVLVL  DGIGLIR +  GK+ NW+L+  PAAQ LAWF+LS S
Sbjct: 98  TVSCCFYVLLLQVLVLATDGIGLIRGALIGKTANWSLLCLPAAQFLAWFVLSVS 151


>ref|XP_002269589.1| PREDICTED: ABC transporter C family member 5-like [Vitis vinifera]
          Length = 1773

 Score =  135 bits (339), Expect = 5e-30
 Identities = 70/114 (61%), Positives = 85/114 (74%)
 Frame = -1

Query: 345 ICINLTLVLVLLFIVSARQIVVCLGRIRVDKEGSNRNSVPIRCSRDGDIQNIVIRRWYKA 166
           ICINLTL LV LFIVSARQ  VC+GR+R+ K+ S  NS PIR S D +I++I I + + A
Sbjct: 279 ICINLTLFLVFLFIVSARQFFVCIGRVRIIKDDSGANSNPIRRSIDREIRDIEIGKGFIA 338

Query: 165 SAFCCFYVLFLQVLVLGFDGIGLIRESARGKSINWTLVLSPAAQSLAWFLLSFS 4
           +  CCFYVL LQVLVL  DGIGLIR +  GK+ NW+L+  PAAQ LAWF+LS S
Sbjct: 339 TVSCCFYVLLLQVLVLATDGIGLIRGALIGKTANWSLLCLPAAQFLAWFVLSVS 392


>ref|XP_002301841.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222843567|gb|EEE81114.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 391

 Score =  135 bits (339), Expect = 5e-30
 Identities = 66/116 (56%), Positives = 87/116 (75%), Gaps = 2/116 (1%)
 Frame = -1

Query: 345 ICINLTLVLVLLFIVSARQIVVCLGRIRVDKEGSN-RNSVPIRCSR-DGDIQNIVIRRWY 172
           IC+NLTL +V LFI+SARQI VC+GR+R+ K+ S   N  PIR S  DG+I++++I   +
Sbjct: 33  ICVNLTLFIVSLFIISARQIFVCVGRVRILKDDSTVPNPTPIRRSSVDGEIRDVIIGTGF 92

Query: 171 KASAFCCFYVLFLQVLVLGFDGIGLIRESARGKSINWTLVLSPAAQSLAWFLLSFS 4
           K   FCCFYVL LQ LVLGFDG+ LIRE+ +G  ++W+ +  PAAQ LAWF+LSFS
Sbjct: 93  KLCLFCCFYVLLLQFLVLGFDGVALIREAVKGNDVDWSEICVPAAQGLAWFVLSFS 148


>ref|XP_002526533.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223534094|gb|EEF35811.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1504

 Score =  133 bits (335), Expect = 1e-29
 Identities = 72/117 (61%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
 Frame = -1

Query: 345 ICINLTLVLVLLFIVSARQIVVCLGRIRVDKEG-SNRNSVPIR-CSRDGDIQNIV-IRRW 175
           ICINLTL LV LFIVSARQI VC+GR+R+ K+  S  NS PIR  S DG+I  ++ I   
Sbjct: 35  ICINLTLFLVFLFIVSARQIFVCVGRVRLLKDDHSAANSSPIRRSSADGEIPVVITISTG 94

Query: 174 YKASAFCCFYVLFLQVLVLGFDGIGLIRESARGKSINWTLVLSPAAQSLAWFLLSFS 4
           +K    CCFYVLFLQ LVLGFDGI LIRE+  GK ++W+++  PAAQ LAWF+LSFS
Sbjct: 95  FKLVLVCCFYVLFLQFLVLGFDGIALIREAVNGKVVDWSIICLPAAQGLAWFVLSFS 151


>ref|XP_002321297.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222862070|gb|EEE99612.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1513

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/114 (53%), Positives = 79/114 (69%)
 Frame = -1

Query: 345 ICINLTLVLVLLFIVSARQIVVCLGRIRVDKEGSNRNSVPIRCSRDGDIQNIVIRRWYKA 166
           IC+NLTL +V LFI SARQI VC+GRIR+              S DGDI++++I   +K 
Sbjct: 33  ICVNLTLFIVFLFISSARQIFVCVGRIRMS-------------SIDGDIRDVIIGTGFKL 79

Query: 165 SAFCCFYVLFLQVLVLGFDGIGLIRESARGKSINWTLVLSPAAQSLAWFLLSFS 4
             F CFYVL LQ LVLGFDG+ LI+E+  GK ++W+++  PAAQ LAWF+LSFS
Sbjct: 80  CLFGCFYVLLLQFLVLGFDGVALIKEAVNGKDVDWSVICLPAAQGLAWFVLSFS 133


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