BLASTX nr result

ID: Cnidium21_contig00012807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012807
         (1705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein...   228   4e-57
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]   163   1e-37
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...   162   2e-37
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...   153   2e-34
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...   148   5e-33

>ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Cucumis
            sativus] gi|449503744|ref|XP_004162155.1| PREDICTED:
            putative F-box/LRR-repeat protein At3g18150-like [Cucumis
            sativus]
          Length = 512

 Score =  228 bits (581), Expect = 4e-57
 Identities = 167/520 (32%), Positives = 263/520 (50%), Gaps = 36/520 (6%)
 Frame = +1

Query: 79   KQKGSEDDQEDRLSNLPDSILLHILSFLPMKDAVKTVLLRRFGNLWISLQTLNFDGRSYL 258
            K+  +E+D+ D +S LP+S+L+ ILS+LP +DAVK  L+ RF NLW  +  L+FD  +Y 
Sbjct: 6    KRTRTEEDRNDWISQLPESVLVDILSYLPTRDAVKMALISRFRNLWTYIHHLSFDECAYH 65

Query: 259  --------NFPKSFRNKWFTVFVPHALLRHECPAIFKFSLKFGSYLYFSPSGFKLPKEKK 414
                    N+     ++ F   + H L+ HE   I +F LKF   L+ +    +   +  
Sbjct: 66   DHNIYDGENYDGPHYDERFLNLIRHVLILHERTIIDEFHLKFAFNLFNAIHDDQYNSDGY 125

Query: 415  AL-EPNLASTVDSWIYFALRKKVKILDLGILAHGSSSTRFDYDLPDAVFTSDFIIEMNLV 591
            A  E  +AS + +WI F+LRK+VK+LD+ +L  G S    +Y+LP ++ T+ ++ E++L 
Sbjct: 126  ASKERRMASELTTWIKFSLRKQVKVLDIDLLGCGLSEPEVNYELPTSILTNKYLKELSLT 185

Query: 592  NISLRQPEQVHLKALKSLSFTTIMLNDKMMEGILSGCPSLESLSLIQCCGLRKLNCTSAR 771
               + +  ++ L +L  LS   IML+DK+M  IL GCP LE LSL  CCGL KL  T++ 
Sbjct: 186  GCGIEEKGRIQLTSLSKLSLKEIMLSDKIMGEILIGCPMLEELSLDGCCGLHKLKLTTSN 245

Query: 772  LTKLMIVVG--NDF--ARVEISGPNLKSLGISGLHGQVDLRNVSSVVEATLDICHD---- 927
            + +L I+VG  N+   +R+EIS P LKSL ++G    V L+  +S+ +A+L         
Sbjct: 246  IKRLKIIVGWRNEMSNSRLEISCPGLKSLELAGAIHLVQLKYSASIFDASLYYSRTFMCE 305

Query: 928  ---YCNIGSLLESLHQASTFTMTSWCILMLIMSEKDSIPCPSSTRKHLVLKTPITKRHLP 1098
               Y  +  LL  L + S F   +W  L+  + +   +P P +  K +  +   TK H+P
Sbjct: 306  RRIYEKVQMLLWKLAEVSVFIPCTWTTLIFTIWDLTYVPIPVAGWKSVEFRLLFTKWHMP 365

Query: 1099 GIARLLRSSPHLEMLTIQIGDDT-SLFHPEDSLHIGISEFSRWDCWNDEMWLNASEIGVE 1275
            GI  +LR+S  LE LT  I   + S F  E++  +   +F     W  +   N    G  
Sbjct: 366  GICSILRNSHWLETLTFYIYPGSYSTFLTEEAKWMEAYDFDGKSYWKSQ---NGDFRG-- 420

Query: 1276 HFLETEPSFSCLNNHLRTVRISGARVSNXXXXXXXXXXXXXXIVLEKMEIHMRKSYPCSY 1455
                       L  +L+TV+I G  V+               +VLEKM I  +K+    +
Sbjct: 421  ----------GLRKYLKTVKIYG-YVTEPYVLELIEFLLKNALVLEKMVISTKKTLQPIH 469

Query: 1456 TW---------------PAELMELSKLLSTCRKASPSAMI 1530
             +               P EL++ S+ L T  +AS SA+I
Sbjct: 470  QYELFKDAVFDQEDRFTPKELLQFSQKLLTLPRASKSAVI 509


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score =  163 bits (412), Expect = 1e-37
 Identities = 160/523 (30%), Positives = 236/523 (45%), Gaps = 36/523 (6%)
 Frame = +1

Query: 76   KKQKGSEDDQEDRLSNLPDSILLHILSFLPMKDAVKT-VLLRRFGNLWISLQTLNFDGRS 252
            + +K   + + DR+S LPD +L+HILSFLPM  A++T VL +RF   W S   L FD  S
Sbjct: 24   RSRKNPRESRVDRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVFDQDS 83

Query: 253  YLNFPKSFRNKWFTVFVPHALLRHECPAIFKFSLKFGSYLYFSPSGFKLPKEKKALEPNL 432
                        F  FV  ALL H+     +   KF  Y+             + +E +L
Sbjct: 84   EWEIDD------FITFVNRALLLHBPNCKVQ---KFTIYMDCMD---------QVIENSL 125

Query: 433  AST-VDSWIYFALRKKVKILDLGILAHGSS----STRFD---YDLPDAVFTSDFIIEMNL 588
                V  W+ FA RK V+ L+LG            +R+D   Y LP  +F      ++  
Sbjct: 126  QEDCVTLWLRFATRKGVEKLNLGFNDEEDPLQLWESRYDSYRYLLPQFIFRHSSFRKLAT 185

Query: 589  VNISLRQPEQVHLKALKSLSFTTIMLNDKMMEGILSGCPSLESLSLIQCCGLRKLNCTSA 768
               +      V    LKSLS     LN++ +  IL G P+LE L   +C G  ++N  S 
Sbjct: 186  RFCNFVTYGVVSWAWLKSLSIGYAELNEETIRNILMGSPALECLEFHRCHGFARINICSE 245

Query: 769  RLTKLMIV---VGNDFAR---VEISGPNLKSLGISGLHGQV-DLRNVSSVVEATLDI--- 918
             L KL I+     ND      +E+S PN++SL +SG   ++  L ++SS+V A LDI   
Sbjct: 246  SLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMM 305

Query: 919  ---------CHDYCN-IGSLLESLHQASTFTMTSWCILMLIMSEKDSIPCPSSTRKHLVL 1068
                       DY N +  +L+ L      T+ +WC+ +L + E  S+P P S  ++L+L
Sbjct: 306  HQDRNFQYFSEDYSNMLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLIL 365

Query: 1069 KTPITKRHLPGIARLLRSSPHLEMLTIQIGDDTSLFHPEDSLHIGISEFSRWDCWNDEMW 1248
             T   K  LPGIA LL+SSP LE                  LHI ++  +    W  +++
Sbjct: 366  NTLPKKWDLPGIASLLKSSPDLE-----------------KLHIDVNPLNVLKFWEXQVF 408

Query: 1249 LNASEIGVEH---FLET-EPSFSCLNNHLRTVRISG---ARVSNXXXXXXXXXXXXXXIV 1407
             N  + G +H   F E+ E SF CL  +L+ ++I G                       V
Sbjct: 409  NNYYKYGDDHGESFWESEEKSFKCLLQNLKIIKIVGFDPGYCDIQFAIAFIEFLLKNAQV 468

Query: 1408 LEKMEIHMRKSYPCSYTWPAELMELSKLLSTCRKASPSAMIVL 1536
            LEKM I++RK    +     EL   SK++   +  S S+  VL
Sbjct: 469  LEKMVINVRKVKRQTSYAAQELPSGSKIVKLHKSVSTSSSFVL 511


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
            gi|222847400|gb|EEE84947.1| f-box family protein [Populus
            trichocarpa]
          Length = 481

 Score =  162 bits (411), Expect = 2e-37
 Identities = 127/384 (33%), Positives = 197/384 (51%), Gaps = 27/384 (7%)
 Frame = +1

Query: 85   KGSEDDQEDRLSNLPDSILLHILSFLPMKDAVKTVLL-RRFGNLWISLQTLNFDGRSYLN 261
            +  E  + DR+SNLPD I+ HILSFLP  DA+KT +L +R+ ++W  +  L F  R   +
Sbjct: 37   QNKECQKVDRISNLPDPIIQHILSFLPADDAIKTCILSKRWDSIWTLVPNLIF--RRECS 94

Query: 262  FPKSFRNKWFTVFVPHALLRHECPAIFKFSLKFGSYLYFSPSGFKLPKEKKALEPNLAST 441
              +   N  F VFV  AL+ +  P + KF ++F     F                   + 
Sbjct: 95   CSQEAEN--FAVFVDKALMHYCSPKVKKFLVEFEFTECFK------------------AQ 134

Query: 442  VDSWIYFALRKKVKILDLGILAHGSSSTRFDYDLPDAVFTSDFIIEMNL--VNISLRQPE 615
            VDSW+ FA+R KV+ L L      +    + Y LP+ ++++    +++L    +S  + +
Sbjct: 135  VDSWVDFAVRLKVEELCLEFHREIADDPDYYY-LPNFLYSNIPAEKLSLRFCALSPNKLK 193

Query: 616  QVHLKALKSLSFTTIMLNDKMMEGILSGCPSLESLSLIQCCGLRKLNCTSARLTKLMIVV 795
            QV   +LK LS +   L+++M++ I  GC  LE L L QCCG  ++N   +   K ++V 
Sbjct: 194  QVSWMSLKVLSISYSWLSNEMIKNIFLGCSLLEYLKLNQCCGFDQINTNFSSSLKDLVVD 253

Query: 796  GN--------DFARVEISGPNLKSLGISGLHGQVD--LRNVSSVVEATLDICHDYCNIG- 942
            G+        DF  + I GPNL SL ++G   + +  L +VSS+VEA++      C+ G 
Sbjct: 254  GSWGPEDKFGDFV-ITIKGPNLLSLTLAGYMHRANYMLLDVSSLVEASIGYRMKSCSHGC 312

Query: 943  -------------SLLESLHQASTFTMTSWCILMLIMSEKDSIPCPSSTRKHLVLKTPIT 1083
                          LLE L      T+ +WC+ +L +SE   +  P+S  K+L L   I 
Sbjct: 313  RSNWYSAHRSVLHDLLEKLQHVEKLTIGTWCLQVLSISEVKGLSSPTSACKYLTLNKKIN 372

Query: 1084 KRHLPGIARLLRSSPHLEMLTIQI 1155
            K  LPGIA LL+SSP+L+ LTI +
Sbjct: 373  KWDLPGIASLLQSSPNLQKLTINL 396


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
            vinifera]
          Length = 610

 Score =  153 bits (386), Expect = 2e-34
 Identities = 153/526 (29%), Positives = 247/526 (46%), Gaps = 40/526 (7%)
 Frame = +1

Query: 70   SNKKQKGSEDDQE---------DRLSNLPDSILLHILSFLPMKDAVKT-VLLRRFGNLWI 219
            +N+  +G +D+ +         D +S L DSIL+ ILSFLPMK  V T +L +R+  LW 
Sbjct: 52   ANQSVRGDDDEDDGDEEISSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWT 111

Query: 220  SLQTLNFDGRSYLNFPKSFRNKWFTVFVPHALLRHECPAIFKFSLKFGSYLYFSPSGFKL 399
             +  L F  R         R++ F   +   L+ H+   I KF + F             
Sbjct: 112  MVPNLVFRFRR--------RDEHFVNSIDKTLVLHQNSQIKKFLIDF------------- 150

Query: 400  PKEKKALEPNLASTVDSWIYFALRKKVKILDLGILAHG---SSSTRFDYDLPDAVFTSDF 570
                   +    S+V+ WI  A RK V+ L L         SS   + + LP  ++ +  
Sbjct: 151  -----TYQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSS 205

Query: 571  IIEMNLVNISLRQPEQVHLKALKSLSFTTIMLNDKMMEGILSGCPSLESLSLIQCCGLRK 750
            I++++L   +++    +   +LK+LS  ++ L D ++E ILSGCP+LESL L  C G+  
Sbjct: 206  IVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGINS 265

Query: 751  LNCTSARLTKLMIVVGNDFAR------VEISGPNLKSLGISG--LHGQVDLRNVSSVVEA 906
            LN TSA L KL+I    D +       ++IS PN++SLGI G     +  ++NV S+ +A
Sbjct: 266  LNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKECRVKNVPSLFDA 325

Query: 907  TLD---------------ICHDYCNIGSLLESLHQASTFTMTSWCILMLIMSEKDSIPCP 1041
            +L+               + H    +  LL+S++     T+ +WCI +L + E   +   
Sbjct: 326  SLNFELAMQEGNPKDHYKLYHKV--VMKLLKSVNHVKALTVGTWCIQVLSIFEGKDLSSL 383

Query: 1042 SSTRKHLVLKTPITKRHLPGIARLLRSSPHLEMLTIQIGDDTSLFHPEDSLHIGISEFSR 1221
             S  K L+L T + K  LPGIA LL+SS HLE   I +    S    + S+ +G S F+ 
Sbjct: 384  LSNLKCLILDTHLNKWDLPGIANLLQSSTHLETFVINMISPCS---QQISVEVGFS-FTD 439

Query: 1222 WDCWNDEMWLNASEIGVEHFLETEPSFSCLNNHLRTVRISGARVSNXXXXXXXXXXXXXX 1401
               +++E + ++ E  + + L           +L+TV+I G  + N              
Sbjct: 440  LHNFDEEKYWSSREGVLANSL----------INLKTVKIIGV-IWNQPGIELVFGLVKFL 488

Query: 1402 I----VLEKMEIHMRKSYPCSYTWPAELMELSKLLSTCRKASPSAM 1527
            +    +LEK+EI  ++       W + L     LLS  R ASP+A+
Sbjct: 489  LKNARMLEKVEICAKRDSQSRSRW-SSLNSAQSLLSFPR-ASPNAV 532


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
            vinifera]
          Length = 665

 Score =  148 bits (373), Expect = 5e-33
 Identities = 129/389 (33%), Positives = 186/389 (47%), Gaps = 29/389 (7%)
 Frame = +1

Query: 76   KKQKGSEDDQEDRLSNLPDSILLHILSFLPMKDAVKT-VLLRRFGNLWISLQTLNFDGRS 252
            + +K   + + DR+S LPD +L+HILSFLPM  A++T VL +RF   W S   L FD  S
Sbjct: 24   RSRKNPRESRVDRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVFDQDS 83

Query: 253  YLNFPKSFRNKWFTVFVPHALLRHECPAIFKFSLKFGSYLYFSPSGFKLPKEKKALEPNL 432
                        F  FV  ALL H+     +   KF  Y+             + +E +L
Sbjct: 84   EWEIDD------FITFVNRALLLHDPNCKVQ---KFTIYMDCMD---------QVIENSL 125

Query: 433  AST-VDSWIYFALRKKVKILDLGILAHGSS----STRFD---YDLPDAVFTSDFIIEMNL 588
                V  W+ FA RK V+ L+LG            +R+D   Y LP  +F      ++  
Sbjct: 126  QEDCVTLWLRFATRKGVEKLNLGFNDEEDPLQLWESRYDSYRYLLPQFIFRHSSFRKLAT 185

Query: 589  VNISLRQPEQVHLKALKSLSFTTIMLNDKMMEGILSGCPSLESLSLIQCCGLRKLNCTSA 768
               +      V    LKSLS     LN++ +  IL G P+LE L   +C G  ++N  S 
Sbjct: 186  RFCNFVTYGVVSWAWLKSLSIGYAELNEETIRNILMGSPALECLEFHRCHGFARINICSE 245

Query: 769  RLTKLMIV---VGNDFAR---VEISGPNLKSLGISGLHGQV-DLRNVSSVVEATLDI--- 918
             L KL I+     ND      +E+S PN++SL +SG   ++  L ++SS+V A LDI   
Sbjct: 246  SLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMM 305

Query: 919  ---------CHDYCN-IGSLLESLHQASTFTMTSWCILMLIMSEKDSIPCPSSTRKHLVL 1068
                       DY N +  +L+ L      T+ +WC+ +L + E  S+P P S  ++L+L
Sbjct: 306  HQDRNFQYFSEDYSNMLREILKHLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLIL 365

Query: 1069 KTPITKRHLPGIARLLRSSPHLEMLTIQI 1155
             T   K  LPGIA LL+SSP LE L I +
Sbjct: 366  NTLPKKWDLPGIASLLKSSPDLEKLHIDV 394



 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 21/263 (7%)
 Frame = +1

Query: 814  VEISGPNLKSLGISGLHGQV-DLRNVSSVVEATLDI------------CHDYCN-IGSLL 951
            +E+S PN++SL +SG   ++  L ++SS+V A LDI              DY N +  +L
Sbjct: 420  LEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLREIL 479

Query: 952  ESLHQASTFTMTSWCILMLIMSEKDSIPCPSSTRKHLVLKTPITKRHLPGIARLLRSSPH 1131
            + L      T+ +WC+ +L + E  S+P P S  ++L+L T   K  LPGIA LL+SSP 
Sbjct: 480  KQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKSSPD 539

Query: 1132 LEMLTIQIGDDTSLFHPEDSLHIGISEFSRWDCWNDEMWLNASEIGVEH---FLET-EPS 1299
            LE                  LHI ++  +    W  +++ N  + G +H   F E+ E S
Sbjct: 540  LE-----------------KLHIDVNPLNVLKFWEHQVFNNYYKYGDDHGESFWESEEKS 582

Query: 1300 FSCLNNHLRTVRISG---ARVSNXXXXXXXXXXXXXXIVLEKMEIHMRKSYPCSYTWPAE 1470
            F CL  +L+ ++I G                       VLEKM I++RK    +     E
Sbjct: 583  FKCLLQNLKIIKIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINVRKVKRQTSYAAQE 642

Query: 1471 LMELSKLLSTCRKASPSAMIVLA 1539
            L  + KLLS  R ASP A ++ +
Sbjct: 643  LPVVQKLLSFTR-ASPRAAVLFS 664


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