BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012787
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC86742.1| RNA recognition motif-containing protein [Vitis p...   154   5e-36
ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   154   5e-36
ref|XP_002329210.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_002874610.1| RNA recognition motif-containing protein [Ar...   149   2e-34
ref|NP_192749.2| RNA recognition motif-containing protein [Arabi...   149   2e-34

>gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
          Length = 194

 Score =  154 bits (390), Expect = 5e-36
 Identities = 76/89 (85%), Positives = 82/89 (92%)
 Frame = +2

Query: 38  MSGDRDSTVFIGNLDERVSDRVLYDILIQAGRVVDLYIPRDRETDRPKGIAFAEYESEEI 217
           MS     +V+IGNLDERVSDRVLYDILIQAGRVVDLYIPRD+ETDRPKG AFAEYE+EEI
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 218 ADYAVRLFSGLVTLYNRNLRFAISGQDKP 304
           ADYAV+LFSGLVTLYNR L+FAISGQDKP
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFAISGQDKP 89


>ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|297734803|emb|CBI17037.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  154 bits (390), Expect = 5e-36
 Identities = 76/89 (85%), Positives = 82/89 (92%)
 Frame = +2

Query: 38  MSGDRDSTVFIGNLDERVSDRVLYDILIQAGRVVDLYIPRDRETDRPKGIAFAEYESEEI 217
           MS     +V+IGNLDERVSDRVLYDILIQAGRVVDLYIPRD+ETDRPKG AFAEYE+EEI
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 218 ADYAVRLFSGLVTLYNRNLRFAISGQDKP 304
           ADYAV+LFSGLVTLYNR L+FAISGQDKP
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFAISGQDKP 89


>ref|XP_002329210.1| predicted protein [Populus trichocarpa] gi|222870991|gb|EEF08122.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/88 (84%), Positives = 82/88 (93%)
 Frame = +2

Query: 38  MSGDRDSTVFIGNLDERVSDRVLYDILIQAGRVVDLYIPRDRETDRPKGIAFAEYESEEI 217
           MSG    +++IGNLDERVSDRVLYDILIQAGRVVDL+IPRDRETD+PKG AFAEYE+EEI
Sbjct: 1   MSGPSSCSIYIGNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDKPKGYAFAEYETEEI 60

Query: 218 ADYAVRLFSGLVTLYNRNLRFAISGQDK 301
           ADYAV+LFSGLVTLYNR L+FAISGQDK
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFAISGQDK 88


>ref|XP_002874610.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297320447|gb|EFH50869.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 171

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/88 (80%), Positives = 84/88 (95%)
 Frame = +2

Query: 38  MSGDRDSTVFIGNLDERVSDRVLYDILIQAGRVVDLYIPRDRETDRPKGIAFAEYESEEI 217
           MS + + TV+IGN+DERVSDRVLYDI+IQAGRV+DL+IPRD+ETD+PKG AFAEYE+EEI
Sbjct: 1   MSTNSNCTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEI 60

Query: 218 ADYAVRLFSGLVTLYNRNLRFAISGQDK 301
           ADYAV+LFSGLV+LYNRNL+FAISGQDK
Sbjct: 61  ADYAVKLFSGLVSLYNRNLKFAISGQDK 88


>ref|NP_192749.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|26453246|dbj|BAC43696.1| unknown protein [Arabidopsis
           thaliana] gi|28372886|gb|AAO39925.1| At4g10100
           [Arabidopsis thaliana] gi|332657441|gb|AEE82841.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 173

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/88 (80%), Positives = 83/88 (94%)
 Frame = +2

Query: 38  MSGDRDSTVFIGNLDERVSDRVLYDILIQAGRVVDLYIPRDRETDRPKGIAFAEYESEEI 217
           MSG  + TV+IGN+DERVSDRVLYDI+IQAGRV+DL+IPRD+ETD+PKG AFAEYE+EEI
Sbjct: 1   MSGTSNCTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEI 60

Query: 218 ADYAVRLFSGLVTLYNRNLRFAISGQDK 301
           ADYAV+LFSGLV+LYNR L+FAISGQDK
Sbjct: 61  ADYAVKLFSGLVSLYNRTLKFAISGQDK 88