BLASTX nr result

ID: Cnidium21_contig00012778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012778
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272545.1| PREDICTED: zinc finger protein 1-like [Vitis...   192   9e-47
emb|CAN74885.1| hypothetical protein VITISV_000223 [Vitis vinifera]   190   6e-46
ref|XP_002527314.1| zinc finger protein, putative [Ricinus commu...   178   2e-42
emb|CBI21086.3| unnamed protein product [Vitis vinifera]              167   5e-39
ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis...   167   5e-39

>ref|XP_002272545.1| PREDICTED: zinc finger protein 1-like [Vitis vinifera]
          Length = 267

 Score =  192 bits (489), Expect = 9e-47
 Identities = 136/285 (47%), Positives = 166/285 (58%), Gaps = 16/285 (5%)
 Frame = +3

Query: 96  LSLTLYILSIDLDSRSKLYKLHMQMESQREGKQVVHDLQQDGHDHKEHKIPNXXXXXXXX 275
           LS T  I+S+   + S    L+  M+S +EGKQ      Q+G D  + ++ N        
Sbjct: 10  LSETSSIISVSEAAPS----LNTSMDSPKEGKQ------QEGQDRNQEELTNPDL----- 54

Query: 276 XXXKVEDADREESMITRHQTDQLNLINYLD---DNDHTY-----SSEPRVFPCNYCQRKF 431
               V D       + +    +LNLIN  +     +H+        EPRVF CNYCQRKF
Sbjct: 55  ----VLDLSLSSRDLEQGSRPELNLINSFEMGSSQNHSEIPQGNEGEPRVFSCNYCQRKF 110

Query: 432 YSSQALGGHQNAHKRERTIAKRRQRIGXXXXXXXXXXXQNP----SMASLPLHGSFNRSL 599
           YSSQALGGHQNAHKRERT+AKR QRIG            NP    SMASLPLHGSFNRSL
Sbjct: 111 YSSQALGGHQNAHKRERTLAKRGQRIG-AASVAFGHPLPNPYRFSSMASLPLHGSFNRSL 169

Query: 600 GIRVHSMIHKPSVTYNLVPAFGG---KPFDQQPAIGRLSQPPENNNYHVVAPPSTGGAAR 770
           GI+ HS+IHKPS   + +    G    P DQQPAIGRL+  PE  NYHV +  S+GGAAR
Sbjct: 170 GIQAHSLIHKPSSLSSTLYGHQGWSRLPIDQQPAIGRLA--PE--NYHVGSSSSSGGAAR 225

Query: 771 FDSVWKFS-PGGDGARGYNRCDSGSLLKKTNHQDDFQKLDLSLKL 902
           F++V KFS P  +G  GY   +S +L  K N QD+ QKLDLSLKL
Sbjct: 226 FETVRKFSRPASEGIGGYWWNNSNNL--KMN-QDELQKLDLSLKL 267


>emb|CAN74885.1| hypothetical protein VITISV_000223 [Vitis vinifera]
          Length = 267

 Score =  190 bits (482), Expect = 6e-46
 Identities = 135/285 (47%), Positives = 163/285 (57%), Gaps = 16/285 (5%)
 Frame = +3

Query: 96  LSLTLYILSIDLDSRSKLYKLHMQMESQREGKQVVHDLQQDGHDHKEHKIPNXXXXXXXX 275
           LS T  I+S+   + S    L+  M+S +EGKQ      Q+  D  + ++ N        
Sbjct: 10  LSETSSIISVSEAAPS----LNTSMDSPKEGKQ------QEXQDRNQEELTNPDL----- 54

Query: 276 XXXKVEDADREESMITRHQTDQLNLINYLDDNDHTYSSE--------PRVFPCNYCQRKF 431
               V D       + +    +LNLIN  +       SE        PRVF CNYCQRKF
Sbjct: 55  ----VLDLSLSSRDLEQGSRPELNLINSFEMGSSQNQSEIPQGNEGEPRVFSCNYCQRKF 110

Query: 432 YSSQALGGHQNAHKRERTIAKRRQRIGXXXXXXXXXXXQNP----SMASLPLHGSFNRSL 599
           YSSQALGGHQNAHKRERT+AKR QRIG            NP    SMASLPLHGSFNRSL
Sbjct: 111 YSSQALGGHQNAHKRERTLAKRGQRIG-AASVAFGHPLPNPYRFSSMASLPLHGSFNRSL 169

Query: 600 GIRVHSMIHKPSVTYNLVPAFGG---KPFDQQPAIGRLSQPPENNNYHVVAPPSTGGAAR 770
           GI+ HS+IHKPS   + +    G    P DQQPAIGRL+  PE  NYHV +  S+GGAAR
Sbjct: 170 GIQAHSLIHKPSSLSSTLYGHQGWSRLPIDQQPAIGRLA--PE--NYHVGSSSSSGGAAR 225

Query: 771 FDSVWKFS-PGGDGARGYNRCDSGSLLKKTNHQDDFQKLDLSLKL 902
           F++V KFS P  +G  GY   +S +L  K N QD+ QKLDLSLKL
Sbjct: 226 FETVRKFSRPASEGIGGYWWNNSNNL--KMN-QDELQKLDLSLKL 267


>ref|XP_002527314.1| zinc finger protein, putative [Ricinus communis]
           gi|223533314|gb|EEF35066.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 280

 Score =  178 bits (452), Expect = 2e-42
 Identities = 119/272 (43%), Positives = 153/272 (56%), Gaps = 23/272 (8%)
 Frame = +3

Query: 156 LHMQMESQREGKQVVHDLQQDGHDHKEHKIPNXXXXXXXXXXXKVEDADREESMITRHQT 335
           L   MES +E +Q+  + +Q+  + +E                K +    + S+ ++   
Sbjct: 23  LKPSMESPKEAQQLKQEQEQEQENQEER-------VQKQQEDGKHDHLVLDLSLSSKDSK 75

Query: 336 DQLNLINYLD---------DNDHTYS-SEPRVFPCNYCQRKFYSSQALGGHQNAHKRERT 485
            +LNLI+  D         DN H  + +EPRVF CNYCQRKFYSSQALGGHQNAHKRERT
Sbjct: 76  AELNLIDTFDLGPSQKSLSDNPHQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERT 135

Query: 486 IAKRRQRIGXXXXXXXXXXXQN----PSMASLPLHGSFNRSLGIRVHSMIHKPSVTYNLV 653
           +AKR QRI             +     SMASLPLHGS NRSLGI+VHSMIHKP+   + +
Sbjct: 136 LAKRGQRISAASFALGHHHHSHLNRYSSMASLPLHGSLNRSLGIQVHSMIHKPTFIQSSI 195

Query: 654 ---------PAFGGKPFDQQPAIGRLSQPPENNNYHVVAPPSTGGAARFDSVWKFSPGGD 806
                      +  +PFDQQPA+GRL+    + ++H +  PS  G ARF+S  KFSP  +
Sbjct: 196 LGSSNLYGQNGWSRQPFDQQPAVGRLA----SESFH-MGSPSGNGVARFESARKFSPVRE 250

Query: 807 GARGYNRCDSGSLLKKTNHQDDFQKLDLSLKL 902
           G  GY   D G    KT  +DD QKLDLSLKL
Sbjct: 251 GIGGY-WWDGGVNHLKTK-KDDLQKLDLSLKL 280


>emb|CBI21086.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  167 bits (422), Expect = 5e-39
 Identities = 111/217 (51%), Positives = 130/217 (59%), Gaps = 29/217 (13%)
 Frame = +3

Query: 339 QLNLINYLDDNDHTYSSE--------PRVFPCNYCQRKFYSSQALGGHQNAHKRERTIAK 494
           +LNLI+ L+ +    SSE        PRVF CNYCQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 44  ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 103

Query: 495 RRQRIG-------XXXXXXXXXXXQNPSMASLPLHGSFNRSLGIRVHSMIHKPSVTYNLV 653
           R QR+G                     SMASLPLHG++NRSLGI+VHSMIHKPS+T    
Sbjct: 104 RGQRLGAPMVAAATAFGHPYFHHQHYSSMASLPLHGAYNRSLGIQVHSMIHKPSLT---T 160

Query: 654 PAFGG-----------KPFDQQPAIGRLSQPPENNNYHVVAPP-STGGAARFDSVWKF-- 791
           P+ G             P DQQPA+GRL+   EN +  V A P S GG  RFD+V     
Sbjct: 161 PSSGSGNLYGHRSWSRPPIDQQPAVGRLA--VENCHEGVTAGPLSRGGIGRFDTVRMMIN 218

Query: 792 SPGGDGARGYNRCDSGSLLKKTNHQDDFQKLDLSLKL 902
           S   +G  G+  C +G    KTN QD+ QKLDLSLKL
Sbjct: 219 SQANEGIGGF--CWTGGGRLKTN-QDELQKLDLSLKL 252


>ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis vinifera]
          Length = 286

 Score =  167 bits (422), Expect = 5e-39
 Identities = 111/217 (51%), Positives = 130/217 (59%), Gaps = 29/217 (13%)
 Frame = +3

Query: 339 QLNLINYLDDNDHTYSSE--------PRVFPCNYCQRKFYSSQALGGHQNAHKRERTIAK 494
           +LNLI+ L+ +    SSE        PRVF CNYCQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 78  ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 137

Query: 495 RRQRIG-------XXXXXXXXXXXQNPSMASLPLHGSFNRSLGIRVHSMIHKPSVTYNLV 653
           R QR+G                     SMASLPLHG++NRSLGI+VHSMIHKPS+T    
Sbjct: 138 RGQRLGAPMVAAATAFGHPYFHHQHYSSMASLPLHGAYNRSLGIQVHSMIHKPSLT---T 194

Query: 654 PAFGG-----------KPFDQQPAIGRLSQPPENNNYHVVAPP-STGGAARFDSVWKF-- 791
           P+ G             P DQQPA+GRL+   EN +  V A P S GG  RFD+V     
Sbjct: 195 PSSGSGNLYGHRSWSRPPIDQQPAVGRLA--VENCHEGVTAGPLSRGGIGRFDTVRMMIN 252

Query: 792 SPGGDGARGYNRCDSGSLLKKTNHQDDFQKLDLSLKL 902
           S   +G  G+  C +G    KTN QD+ QKLDLSLKL
Sbjct: 253 SQANEGIGGF--CWTGGGRLKTN-QDELQKLDLSLKL 286


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