BLASTX nr result

ID: Cnidium21_contig00012733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012733
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522475.1| conserved hypothetical protein [Ricinus comm...   160   6e-37
ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|2...   151   2e-34
gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]       151   3e-34
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                  148   2e-33
ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...   147   4e-33

>ref|XP_002522475.1| conserved hypothetical protein [Ricinus communis]
           gi|223538360|gb|EEF39967.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  160 bits (404), Expect = 6e-37
 Identities = 86/141 (60%), Positives = 98/141 (69%), Gaps = 5/141 (3%)
 Frame = -1

Query: 813 MALRLAMLKSSKGIGGYSSFGINRLTHSIAIPSPTDCLFGPTTKSPQCVLPE----SDQI 646
           MALRL MLK++ G  GY+  G  R TH  A+P P D         PQ VLPE     D  
Sbjct: 1   MALRLGMLKAASGNNGYT-LGFLRWTHVAAMPPPLDGSINNAIAPPQMVLPEFNPNHDNS 59

Query: 645 SNSESNGAGLGF-PCFPLVGGSMELMAVPRKKVSRHKRGIRNGPKALKPIPVIIRCKACG 469
           ++S  N    GF P F   GGSM+LMAVP+KKVSRHKRGIRNGPKALKP PVIIRC++CG
Sbjct: 60  NSSYDNNLEFGFLPSFSF-GGSMDLMAVPKKKVSRHKRGIRNGPKALKPTPVIIRCRSCG 118

Query: 468 RVKLPHFFCCSGERGNPGEQS 406
           RVKLPHF+CCSGERGN GEQ+
Sbjct: 119 RVKLPHFYCCSGERGNAGEQN 139


>ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|222851139|gb|EEE88686.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  151 bits (382), Expect = 2e-34
 Identities = 80/138 (57%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
 Frame = -1

Query: 813 MALRLAMLKSSKGIGGYSSFGINRLTHSIAIPSPTDCLFGPTTKSPQCVLPESD--QISN 640
           MALRL MLK + G       GI R  H  A+  P D        SPQ  LPE D  Q ++
Sbjct: 1   MALRLGMLKCAAGGNSGCRSGIRRWAHVPAMARPLDGALESYIASPQLTLPELDANQDTS 60

Query: 639 SESNGAGLGFPCFPLVGGSMELMAVPRKKVSRHKRGIRNGPKALKPIPVIIRCKACGRVK 460
           S S+ +G G P F   GGSMELMAVP++KV+ HKRGIRNGPKALKPIPVIIRCK+CG+VK
Sbjct: 61  SNSSNSGFGLPGFSF-GGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVK 119

Query: 459 LPHFFCCSGERGNPGEQS 406
           LPHF+CCSG+RG  GE++
Sbjct: 120 LPHFYCCSGDRGKNGERN 137


>gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]
          Length = 139

 Score =  151 bits (381), Expect = 3e-34
 Identities = 78/140 (55%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
 Frame = -1

Query: 813 MALRLAMLKSSKGIGGYSSFGINRLTHSIAIPSPTDCLFGPTTKSPQCVLPE----SDQI 646
           MALR+ MLK++ G  G  +  + R  H  ++PSP D     TT  P  VLPE     D +
Sbjct: 1   MALRIGMLKTAVGKYG-CTLSLLRWAHIASMPSPLDGSLQRTTAPPDMVLPEFDTNPDNV 59

Query: 645 SNSESNGAGLGFPCFPLVGGSMELMAVPRKKVSRHKRGIRNGPKALKPIPVIIRCKACGR 466
           ++S  N    GFP F   GGS+E+MAVP+KKVS HKRGIRNGPKALKP PVIIRC++CGR
Sbjct: 60  NSSYRNNLEFGFPSFSF-GGSIEVMAVPKKKVSPHKRGIRNGPKALKPTPVIIRCRSCGR 118

Query: 465 VKLPHFFCCSGERGNPGEQS 406
           +KLPHF+CCSG+RG  GEQ+
Sbjct: 119 IKLPHFYCCSGDRGKAGEQN 138


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score =  148 bits (373), Expect = 2e-33
 Identities = 76/138 (55%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = -1

Query: 813 MALRLAMLKSSKGIGGYSSFGINRLTHSIAIPSPTDCLFGPTTKSPQCVLPESDQISNSE 634
           MALRL MLK +         GI + TH +A+  P D     +  +PQ  LPE D   ++ 
Sbjct: 1   MALRLGMLKCAAEGNNGCRLGIRKWTHVVAMAPPLDGALESSIAAPQFTLPEFDANQDTS 60

Query: 633 SNGAGLGFPCFP--LVGGSMELMAVPRKKVSRHKRGIRNGPKALKPIPVIIRCKACGRVK 460
            N +  GF  FP    GGSMELMAVP++KV+ HKRGIRNGPKALKPIPVIIRCK+CG+VK
Sbjct: 61  KNSSDFGFT-FPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVK 119

Query: 459 LPHFFCCSGERGNPGEQS 406
           LPHF+CCSG+RG  GE++
Sbjct: 120 LPHFYCCSGDRGKNGERN 137


>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  147 bits (371), Expect = 4e-33
 Identities = 75/138 (54%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = -1

Query: 813 MALRLAMLKSSKGIGGYSSFGINRLTHSIAIPSPTDCLFGPTTKSPQCVLPESDQISNSE 634
           MALRL MLK +         GI + TH +A+  P D     +  SPQ  LPE D   ++ 
Sbjct: 1   MALRLGMLKCAAEANNGCRLGIRKWTHVVAMAPPLDGALESSIASPQFTLPEFDANQDTS 60

Query: 633 SNGAGLGFPCFP--LVGGSMELMAVPRKKVSRHKRGIRNGPKALKPIPVIIRCKACGRVK 460
           +N +  GF  FP    GGSMELMAVP++KV+ HKRGIRNGPKALKP PVIIRCK+CG+VK
Sbjct: 61  NNSSDFGFT-FPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCKSCGQVK 119

Query: 459 LPHFFCCSGERGNPGEQS 406
           LPHF+CCSG+RG  G+++
Sbjct: 120 LPHFYCCSGDRGKNGKRN 137


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