BLASTX nr result
ID: Cnidium21_contig00012716
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00012716 (628 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 298 4e-79 emb|CBI26203.3| unnamed protein product [Vitis vinifera] 298 4e-79 ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2... 295 6e-78 ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ... 293 2e-77 gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ... 290 1e-76 >ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like [Vitis vinifera] Length = 482 Score = 298 bits (764), Expect = 4e-79 Identities = 147/189 (77%), Positives = 160/189 (84%) Frame = +3 Query: 3 SDVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKA 182 SDV HVHVNPIEPMPS LHHRFVIC+K ER LLSL+ SDAP+ IIFVGEQSEKSKKA Sbjct: 292 SDVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKA 351 Query: 183 GNAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGV 362 GNAP T LID LK+S GC DILLL+ED+NFN RA SLSE+RQ GGYLL+STDIAARGV Sbjct: 352 GNAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGV 411 Query: 363 DLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMF 542 DLPETTHIYNFDLP+ V YLHRAGR RKPFSD KC VT+I+TSEE+FVL+RYENELMF Sbjct: 412 DLPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMF 471 Query: 543 QCEEFFL*T 569 CEE FL T Sbjct: 472 HCEELFLST 480 >emb|CBI26203.3| unnamed protein product [Vitis vinifera] Length = 486 Score = 298 bits (764), Expect = 4e-79 Identities = 147/189 (77%), Positives = 160/189 (84%) Frame = +3 Query: 3 SDVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKA 182 SDV HVHVNPIEPMPS LHHRFVIC+K ER LLSL+ SDAP+ IIFVGEQSEKSKKA Sbjct: 296 SDVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKA 355 Query: 183 GNAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGV 362 GNAP T LID LK+S GC DILLL+ED+NFN RA SLSE+RQ GGYLL+STDIAARGV Sbjct: 356 GNAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGV 415 Query: 363 DLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMF 542 DLPETTHIYNFDLP+ V YLHRAGR RKPFSD KC VT+I+TSEE+FVL+RYENELMF Sbjct: 416 DLPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMF 475 Query: 543 QCEEFFL*T 569 CEE FL T Sbjct: 476 HCEELFLST 484 >ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1| predicted protein [Populus trichocarpa] Length = 310 Score = 295 bits (754), Expect = 6e-78 Identities = 143/186 (76%), Positives = 159/186 (85%) Frame = +3 Query: 6 DVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKAG 185 DV HVHVNPIEPMP+ L HRFVIC K +RH LLSL+ SDAP+S IIFVGEQSEKSKKAG Sbjct: 125 DVVHVHVNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAG 184 Query: 186 NAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGVD 365 N PP L+D LK+S CS+ILLL+ED+NFNSRA SLSE+RQGGGYLLV+TDIAARGVD Sbjct: 185 NGPPTIDLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVD 244 Query: 366 LPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMFQ 545 LPE THIYNF+LP+ AV YLHRAGRTGRKPFSD KC VTSI+ EE+FVL+RYENELMF Sbjct: 245 LPEITHIYNFNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFN 304 Query: 546 CEEFFL 563 CEE FL Sbjct: 305 CEELFL 310 >ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 476 Score = 293 bits (750), Expect = 2e-77 Identities = 138/187 (73%), Positives = 161/187 (86%) Frame = +3 Query: 3 SDVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKA 182 SD HVH+NP++PMPS L HRFVIC KN+RH LLSL+ DAP+S I+FVGEQSEKSKKA Sbjct: 290 SDAVHVHINPVQPMPSCLQHRFVICSKNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKA 349 Query: 183 GNAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGV 362 G+APP T L+D L++S + CSDILLL+ED+NFN RA SLSE++QGGGYLLV+TDIAARGV Sbjct: 350 GHAPPTTLLVDFLETSYSDCSDILLLEEDMNFNLRAASLSEVKQGGGYLLVATDIAARGV 409 Query: 363 DLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMF 542 DLPETTHIYNF+LP+ AV YLHRAGRTGRKPFSD KC T+I+T EE+FVL+RYENELMF Sbjct: 410 DLPETTHIYNFELPRTAVDYLHRAGRTGRKPFSDEKCYATNIITPEERFVLQRYENELMF 469 Query: 543 QCEEFFL 563 CEE L Sbjct: 470 NCEELIL 476 >gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum] Length = 466 Score = 290 bits (742), Expect = 1e-76 Identities = 139/187 (74%), Positives = 162/187 (86%) Frame = +3 Query: 3 SDVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKA 182 +DV HVHVN +EPMPS LHHRFV+C K E++ LLSL+ D+P+SAIIFV EQSEKSKKA Sbjct: 280 ADVVHVHVNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKA 339 Query: 183 GNAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGV 362 GNAPPIT L+D L SS G S++ LL+ED+NFN RA SLSE+R GGGYLLV+TDIAARGV Sbjct: 340 GNAPPITLLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGV 399 Query: 363 DLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMF 542 DLPETTHIYNFD+PKDAV+YLHRAGRTGRKPFSD KC VTSI+T EE+FVL+R+ENELMF Sbjct: 400 DLPETTHIYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMF 459 Query: 543 QCEEFFL 563 CE+ F+ Sbjct: 460 CCEQLFV 466