BLASTX nr result

ID: Cnidium21_contig00012716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012716
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   298   4e-79
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              298   4e-79
ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2...   295   6e-78
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ...   293   2e-77
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ...   290   1e-76

>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  298 bits (764), Expect = 4e-79
 Identities = 147/189 (77%), Positives = 160/189 (84%)
 Frame = +3

Query: 3   SDVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKA 182
           SDV HVHVNPIEPMPS LHHRFVIC+K ER   LLSL+ SDAP+  IIFVGEQSEKSKKA
Sbjct: 292 SDVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKA 351

Query: 183 GNAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGV 362
           GNAP  T LID LK+S  GC DILLL+ED+NFN RA SLSE+RQ GGYLL+STDIAARGV
Sbjct: 352 GNAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGV 411

Query: 363 DLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMF 542
           DLPETTHIYNFDLP+  V YLHRAGR  RKPFSD KC VT+I+TSEE+FVL+RYENELMF
Sbjct: 412 DLPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMF 471

Query: 543 QCEEFFL*T 569
            CEE FL T
Sbjct: 472 HCEELFLST 480


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  298 bits (764), Expect = 4e-79
 Identities = 147/189 (77%), Positives = 160/189 (84%)
 Frame = +3

Query: 3   SDVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKA 182
           SDV HVHVNPIEPMPS LHHRFVIC+K ER   LLSL+ SDAP+  IIFVGEQSEKSKKA
Sbjct: 296 SDVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKA 355

Query: 183 GNAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGV 362
           GNAP  T LID LK+S  GC DILLL+ED+NFN RA SLSE+RQ GGYLL+STDIAARGV
Sbjct: 356 GNAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGV 415

Query: 363 DLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMF 542
           DLPETTHIYNFDLP+  V YLHRAGR  RKPFSD KC VT+I+TSEE+FVL+RYENELMF
Sbjct: 416 DLPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMF 475

Query: 543 QCEEFFL*T 569
            CEE FL T
Sbjct: 476 HCEELFLST 484


>ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  295 bits (754), Expect = 6e-78
 Identities = 143/186 (76%), Positives = 159/186 (85%)
 Frame = +3

Query: 6   DVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKAG 185
           DV HVHVNPIEPMP+ L HRFVIC K +RH  LLSL+ SDAP+S IIFVGEQSEKSKKAG
Sbjct: 125 DVVHVHVNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAG 184

Query: 186 NAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGVD 365
           N PP   L+D LK+S   CS+ILLL+ED+NFNSRA SLSE+RQGGGYLLV+TDIAARGVD
Sbjct: 185 NGPPTIDLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVD 244

Query: 366 LPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMFQ 545
           LPE THIYNF+LP+ AV YLHRAGRTGRKPFSD KC VTSI+  EE+FVL+RYENELMF 
Sbjct: 245 LPEITHIYNFNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFN 304

Query: 546 CEEFFL 563
           CEE FL
Sbjct: 305 CEELFL 310


>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 476

 Score =  293 bits (750), Expect = 2e-77
 Identities = 138/187 (73%), Positives = 161/187 (86%)
 Frame = +3

Query: 3   SDVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKA 182
           SD  HVH+NP++PMPS L HRFVIC KN+RH  LLSL+  DAP+S I+FVGEQSEKSKKA
Sbjct: 290 SDAVHVHINPVQPMPSCLQHRFVICSKNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKA 349

Query: 183 GNAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGV 362
           G+APP T L+D L++S + CSDILLL+ED+NFN RA SLSE++QGGGYLLV+TDIAARGV
Sbjct: 350 GHAPPTTLLVDFLETSYSDCSDILLLEEDMNFNLRAASLSEVKQGGGYLLVATDIAARGV 409

Query: 363 DLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMF 542
           DLPETTHIYNF+LP+ AV YLHRAGRTGRKPFSD KC  T+I+T EE+FVL+RYENELMF
Sbjct: 410 DLPETTHIYNFELPRTAVDYLHRAGRTGRKPFSDEKCYATNIITPEERFVLQRYENELMF 469

Query: 543 QCEEFFL 563
            CEE  L
Sbjct: 470 NCEELIL 476


>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  290 bits (742), Expect = 1e-76
 Identities = 139/187 (74%), Positives = 162/187 (86%)
 Frame = +3

Query: 3   SDVAHVHVNPIEPMPSRLHHRFVICDKNERHAALLSLVLSDAPQSAIIFVGEQSEKSKKA 182
           +DV HVHVN +EPMPS LHHRFV+C K E++  LLSL+  D+P+SAIIFV EQSEKSKKA
Sbjct: 280 ADVVHVHVNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKA 339

Query: 183 GNAPPITTLIDLLKSSLAGCSDILLLDEDVNFNSRAVSLSEMRQGGGYLLVSTDIAARGV 362
           GNAPPIT L+D L SS  G S++ LL+ED+NFN RA SLSE+R GGGYLLV+TDIAARGV
Sbjct: 340 GNAPPITLLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGV 399

Query: 363 DLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCIVTSILTSEEQFVLRRYENELMF 542
           DLPETTHIYNFD+PKDAV+YLHRAGRTGRKPFSD KC VTSI+T EE+FVL+R+ENELMF
Sbjct: 400 DLPETTHIYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMF 459

Query: 543 QCEEFFL 563
            CE+ F+
Sbjct: 460 CCEQLFV 466


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