BLASTX nr result

ID: Cnidium21_contig00012715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012715
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   338   2e-90
ref|XP_003554261.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   334   4e-89
gb|ACU17996.1| unknown [Glycine max]                                  330   4e-88
ref|XP_003521251.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   330   5e-88
ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   328   2e-87

>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
            gi|118482816|gb|ABK93324.1| unknown [Populus trichocarpa]
            gi|222857044|gb|EEE94591.1| f-box family protein [Populus
            trichocarpa]
          Length = 345

 Score =  338 bits (866), Expect = 2e-90
 Identities = 176/351 (50%), Positives = 235/351 (66%)
 Frame = +2

Query: 128  MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
            MS LIEG PD V++  +AR+P YLHP+L LV  +W+AVV S EL   RQEV   ED +CV
Sbjct: 1    MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60

Query: 308  CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
            C+ +PE +WQL+D   ++WIT+PVLPS I HL++FG VS+AGKL+VLGG  D  D +T  
Sbjct: 61   CAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAVDPLTGD 120

Query: 488  RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
            +    ATN+VWSY+PV R+W   A M++ RA FACG L+GKI+VAGGF++   +  I QA
Sbjct: 121  QDGSFATNEVWSYDPVLRQWAARASMLVPRAMFACGTLNGKIVVAGGFTSC--RKSISQA 178

Query: 668  EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
            EMYDP  + WIP+PDL  THN+ C GVV+  K+HV+H+ L+TVQ+LDN    WTV +  W
Sbjct: 179  EMYDPEKDVWIPIPDLHRTHNSTCSGVVIGGKLHVLHRGLSTVQVLDNVGSGWTVEDYGW 238

Query: 848  RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
               P+AVV D +YVM    I+   Q G  +++  +A  + KR GFAM  LG+ IY+IGG 
Sbjct: 239  LQGPMAVVHDALYVMSHGLIF--KQEGKTRKVVVSASEFRKRIGFAMMGLGDDIYVIGG- 295

Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
             +  + +        +V ILT+  + P    +A  MTRCRGTILGCT LR+
Sbjct: 296  VIGPDRWNWDIRPMSDVDILTVGGDRP-TWRQATPMTRCRGTILGCTQLRI 345


>ref|XP_003554261.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
          Length = 345

 Score =  334 bits (856), Expect = 4e-89
 Identities = 176/351 (50%), Positives = 236/351 (67%)
 Frame = +2

Query: 128  MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
            MS LIEG PD V++  LAR+P YLHP L LV  +W+A + S EL   RQEV   ED +CV
Sbjct: 1    MSGLIEGLPDAVAIRCLARVPFYLHPVLELVSRSWQAAICSPELFKARQEVGSTEDLLCV 60

Query: 308  CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
            C+ +PE +WQL+D   ++WIT+PVLPS I HLS FGAVSTAGKL+V+GG  D  D +T  
Sbjct: 61   CAFDPENLWQLYDPMQDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 488  RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
            +    AT++VWSY+PV R W   A M++ R+ FAC VL+GKI+VAGGF++   +  I Q+
Sbjct: 121  QDGCFATDEVWSYDPVAREWASRASMLVPRSMFACCVLNGKIVVAGGFTSC--RKSISQS 178

Query: 668  EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
            EMYDP+ + WIP+PDL  THN+ C GVV+  K+HV+HK+++TVQ+LDN    WTV EC W
Sbjct: 179  EMYDPDKDIWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWTVEECVW 238

Query: 848  RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
                +AVVGD +YVM    I+ +++    +++  +A  + KR GFAM+ LG+ +Y+IGG 
Sbjct: 239  LQGQMAVVGDALYVMSHGLIFKQDK--EVRKVVGSASEFRKRIGFAMTGLGDDLYVIGGF 296

Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
                     +K  S EV +LTL  E P    +A  MTRC GTILGCT LR+
Sbjct: 297  IGPDRWNWDIKPLS-EVDVLTLGSERP-TWRQAARMTRCHGTILGCTLLRI 345


>gb|ACU17996.1| unknown [Glycine max]
          Length = 345

 Score =  330 bits (847), Expect = 4e-88
 Identities = 175/351 (49%), Positives = 235/351 (66%)
 Frame = +2

Query: 128  MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
            MS LIE  PD V++  LAR+P Y HP L LV  +W+A + S EL   RQEV   ED +CV
Sbjct: 1    MSGLIERLPDAVAIRCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCV 60

Query: 308  CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
            C+ +PE +WQL+D   ++WIT+PVLPS I HLS FGAVSTAGKL+V+GG  D  D +T  
Sbjct: 61   CAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 488  RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
            +    AT++VWSY+PV R+W   A M++ R+ FAC VL+GKI+VAGGF++   +  I QA
Sbjct: 121  QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSC--RKSISQA 178

Query: 668  EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
            EMYDP+ + WIP+PDL  THN+ C GVV+  K++V+HK+L+TVQ+LDN    WTV EC W
Sbjct: 179  EMYDPDKDVWIPMPDLHRTHNSACSGVVIGGKVYVLHKDLSTVQVLDNAGPGWTVEECVW 238

Query: 848  RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
                +AVVGD +YVM    I+ +++   E+++  +A  + KR GFAM+ LG+ +Y+IGG 
Sbjct: 239  LQGQMAVVGDALYVMSHGLIFKQDK--EERKVVGSASEFRKRIGFAMTGLGDDLYVIGGF 296

Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
                     +K  S EV +LTL  E P    +A  MTRC G ILGCT LR+
Sbjct: 297  IGPDRWNWDIKPLS-EVDVLTLGSERP-TWRQAAPMTRCHGPILGCTLLRI 345


>ref|XP_003521251.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
          Length = 345

 Score =  330 bits (846), Expect = 5e-88
 Identities = 175/351 (49%), Positives = 234/351 (66%)
 Frame = +2

Query: 128  MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
            MS LIE  PD V++  LAR+P Y HP L LV  +W+A + S EL   RQEV   ED +CV
Sbjct: 1    MSGLIERLPDAVAIRCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCV 60

Query: 308  CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
            C+ +PE +WQL+D   ++WIT+PVLPS I HLS FGAVSTAGKL+V+GG  D  D +T  
Sbjct: 61   CAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 488  RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
            +    AT++VWSY+PV R+W   A M++ R+ FAC VL+GKI+VAGGF++   +  I QA
Sbjct: 121  QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSC--RKSISQA 178

Query: 668  EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
            EMYDP+ + WIP+PDL  THN+ C GVV+  K+HV+HK+L+TVQ+LDN    WTV EC W
Sbjct: 179  EMYDPDKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDLSTVQVLDNAGPGWTVEECVW 238

Query: 848  RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
                +AVVGD +YVM    I+ +++    +++  +A  + KR GFAM+ LG+ +Y+IGG 
Sbjct: 239  LQGQMAVVGDALYVMSHGLIFKQDK--EVRKVVGSASEFRKRIGFAMTGLGDDLYVIGGF 296

Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
                     +K  S EV +LTL  E P    +A  MTRC G ILGCT LR+
Sbjct: 297  IGPDRWNWDIKPLS-EVDVLTLGSERP-TWRQAAPMTRCHGPILGCTLLRI 345


>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|223535945|gb|EEF37604.1|
            Protein AFR, putative [Ricinus communis]
          Length = 345

 Score =  328 bits (842), Expect = 2e-87
 Identities = 173/351 (49%), Positives = 231/351 (65%)
 Frame = +2

Query: 128  MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
            MS LIEG PD +++  +AR+P YLHP+L LV H+W++ + S EL   RQEV   ED +CV
Sbjct: 1    MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 308  CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
            C+ EPE +WQL+D   ++WIT+PVLPS I HL++FG VSTAGKLYVLGG  D  D +T  
Sbjct: 61   CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 488  RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
            +    ATN+VWSY+PV R+W L A M++ RA FAC VL GKI+VAGGF++   +  I QA
Sbjct: 121  QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSC--RKSISQA 178

Query: 668  EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
            EMYDP  + WIP+PDL  THN+ C G+V+  K+H++HK L+ VQ+LDN    WTV +  W
Sbjct: 179  EMYDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNW 238

Query: 848  RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
               P+AVV   +YVM    I    Q G  +++  +A  + +R GFAM+ LG+ IY+IGG 
Sbjct: 239  LQGPMAVVHGALYVMSHGLIC--KQEGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGV 296

Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
                     +K  S +V IL +  E P    +A  M+RCRGTILGC  LR+
Sbjct: 297  IGPDRWNWDIKPMS-DVDILAVGGERP-TWRQAAPMSRCRGTILGCAQLRI 345


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