BLASTX nr result
ID: Cnidium21_contig00012715
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00012715
(1361 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g... 338 2e-90
ref|XP_003554261.1| PREDICTED: F-box/kelch-repeat protein SKIP30... 334 4e-89
gb|ACU17996.1| unknown [Glycine max] 330 4e-88
ref|XP_003521251.1| PREDICTED: F-box/kelch-repeat protein SKIP30... 330 5e-88
ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|... 328 2e-87
>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
gi|118482816|gb|ABK93324.1| unknown [Populus trichocarpa]
gi|222857044|gb|EEE94591.1| f-box family protein [Populus
trichocarpa]
Length = 345
Score = 338 bits (866), Expect = 2e-90
Identities = 176/351 (50%), Positives = 235/351 (66%)
Frame = +2
Query: 128 MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
MS LIEG PD V++ +AR+P YLHP+L LV +W+AVV S EL RQEV ED +CV
Sbjct: 1 MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60
Query: 308 CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
C+ +PE +WQL+D ++WIT+PVLPS I HL++FG VS+AGKL+VLGG D D +T
Sbjct: 61 CAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAVDPLTGD 120
Query: 488 RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
+ ATN+VWSY+PV R+W A M++ RA FACG L+GKI+VAGGF++ + I QA
Sbjct: 121 QDGSFATNEVWSYDPVLRQWAARASMLVPRAMFACGTLNGKIVVAGGFTSC--RKSISQA 178
Query: 668 EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
EMYDP + WIP+PDL THN+ C GVV+ K+HV+H+ L+TVQ+LDN WTV + W
Sbjct: 179 EMYDPEKDVWIPIPDLHRTHNSTCSGVVIGGKLHVLHRGLSTVQVLDNVGSGWTVEDYGW 238
Query: 848 RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
P+AVV D +YVM I+ Q G +++ +A + KR GFAM LG+ IY+IGG
Sbjct: 239 LQGPMAVVHDALYVMSHGLIF--KQEGKTRKVVVSASEFRKRIGFAMMGLGDDIYVIGG- 295
Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
+ + + +V ILT+ + P +A MTRCRGTILGCT LR+
Sbjct: 296 VIGPDRWNWDIRPMSDVDILTVGGDRP-TWRQATPMTRCRGTILGCTQLRI 345
>ref|XP_003554261.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
Length = 345
Score = 334 bits (856), Expect = 4e-89
Identities = 176/351 (50%), Positives = 236/351 (67%)
Frame = +2
Query: 128 MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
MS LIEG PD V++ LAR+P YLHP L LV +W+A + S EL RQEV ED +CV
Sbjct: 1 MSGLIEGLPDAVAIRCLARVPFYLHPVLELVSRSWQAAICSPELFKARQEVGSTEDLLCV 60
Query: 308 CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
C+ +PE +WQL+D ++WIT+PVLPS I HLS FGAVSTAGKL+V+GG D D +T
Sbjct: 61 CAFDPENLWQLYDPMQDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120
Query: 488 RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
+ AT++VWSY+PV R W A M++ R+ FAC VL+GKI+VAGGF++ + I Q+
Sbjct: 121 QDGCFATDEVWSYDPVAREWASRASMLVPRSMFACCVLNGKIVVAGGFTSC--RKSISQS 178
Query: 668 EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
EMYDP+ + WIP+PDL THN+ C GVV+ K+HV+HK+++TVQ+LDN WTV EC W
Sbjct: 179 EMYDPDKDIWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWTVEECVW 238
Query: 848 RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
+AVVGD +YVM I+ +++ +++ +A + KR GFAM+ LG+ +Y+IGG
Sbjct: 239 LQGQMAVVGDALYVMSHGLIFKQDK--EVRKVVGSASEFRKRIGFAMTGLGDDLYVIGGF 296
Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
+K S EV +LTL E P +A MTRC GTILGCT LR+
Sbjct: 297 IGPDRWNWDIKPLS-EVDVLTLGSERP-TWRQAARMTRCHGTILGCTLLRI 345
>gb|ACU17996.1| unknown [Glycine max]
Length = 345
Score = 330 bits (847), Expect = 4e-88
Identities = 175/351 (49%), Positives = 235/351 (66%)
Frame = +2
Query: 128 MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
MS LIE PD V++ LAR+P Y HP L LV +W+A + S EL RQEV ED +CV
Sbjct: 1 MSGLIERLPDAVAIRCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCV 60
Query: 308 CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
C+ +PE +WQL+D ++WIT+PVLPS I HLS FGAVSTAGKL+V+GG D D +T
Sbjct: 61 CAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120
Query: 488 RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
+ AT++VWSY+PV R+W A M++ R+ FAC VL+GKI+VAGGF++ + I QA
Sbjct: 121 QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSC--RKSISQA 178
Query: 668 EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
EMYDP+ + WIP+PDL THN+ C GVV+ K++V+HK+L+TVQ+LDN WTV EC W
Sbjct: 179 EMYDPDKDVWIPMPDLHRTHNSACSGVVIGGKVYVLHKDLSTVQVLDNAGPGWTVEECVW 238
Query: 848 RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
+AVVGD +YVM I+ +++ E+++ +A + KR GFAM+ LG+ +Y+IGG
Sbjct: 239 LQGQMAVVGDALYVMSHGLIFKQDK--EERKVVGSASEFRKRIGFAMTGLGDDLYVIGGF 296
Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
+K S EV +LTL E P +A MTRC G ILGCT LR+
Sbjct: 297 IGPDRWNWDIKPLS-EVDVLTLGSERP-TWRQAAPMTRCHGPILGCTLLRI 345
>ref|XP_003521251.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
Length = 345
Score = 330 bits (846), Expect = 5e-88
Identities = 175/351 (49%), Positives = 234/351 (66%)
Frame = +2
Query: 128 MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
MS LIE PD V++ LAR+P Y HP L LV +W+A + S EL RQEV ED +CV
Sbjct: 1 MSGLIERLPDAVAIRCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCV 60
Query: 308 CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
C+ +PE +WQL+D ++WIT+PVLPS I HLS FGAVSTAGKL+V+GG D D +T
Sbjct: 61 CAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120
Query: 488 RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
+ AT++VWSY+PV R+W A M++ R+ FAC VL+GKI+VAGGF++ + I QA
Sbjct: 121 QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSC--RKSISQA 178
Query: 668 EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
EMYDP+ + WIP+PDL THN+ C GVV+ K+HV+HK+L+TVQ+LDN WTV EC W
Sbjct: 179 EMYDPDKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDLSTVQVLDNAGPGWTVEECVW 238
Query: 848 RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
+AVVGD +YVM I+ +++ +++ +A + KR GFAM+ LG+ +Y+IGG
Sbjct: 239 LQGQMAVVGDALYVMSHGLIFKQDK--EVRKVVGSASEFRKRIGFAMTGLGDDLYVIGGF 296
Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
+K S EV +LTL E P +A MTRC G ILGCT LR+
Sbjct: 297 IGPDRWNWDIKPLS-EVDVLTLGSERP-TWRQAAPMTRCHGPILGCTLLRI 345
>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|223535945|gb|EEF37604.1|
Protein AFR, putative [Ricinus communis]
Length = 345
Score = 328 bits (842), Expect = 2e-87
Identities = 173/351 (49%), Positives = 231/351 (65%)
Frame = +2
Query: 128 MSTLIEGFPDEVSLMILARLPLYLHPRLWLVCHAWKAVVNSVELLNVRQEVNFVEDFMCV 307
MS LIEG PD +++ +AR+P YLHP+L LV H+W++ + S EL RQEV ED +CV
Sbjct: 1 MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60
Query: 308 CSNEPEKIWQLHDTRHNVWITIPVLPSLISHLSYFGAVSTAGKLYVLGGVRDPNDDITYG 487
C+ EPE +WQL+D ++WIT+PVLPS I HL++FG VSTAGKLYVLGG D D +T
Sbjct: 61 CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120
Query: 488 RPCIPATNQVWSYEPVTRRWTLCAPMIMARAKFACGVLDGKIIVAGGFSNSFHQTPIKQA 667
+ ATN+VWSY+PV R+W L A M++ RA FAC VL GKI+VAGGF++ + I QA
Sbjct: 121 QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSC--RKSISQA 178
Query: 668 EMYDPNNNGWIPLPDLPLTHNAPCYGVVVREKMHVVHKELATVQILDNDTQVWTVSECPW 847
EMYDP + WIP+PDL THN+ C G+V+ K+H++HK L+ VQ+LDN WTV + W
Sbjct: 179 EMYDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNW 238
Query: 848 RNYPLAVVGDEVYVMCCEKIYHENQVGHEKQLKFTAFGYNKRSGFAMSSLGNSIYLIGGN 1027
P+AVV +YVM I Q G +++ +A + +R GFAM+ LG+ IY+IGG
Sbjct: 239 LQGPMAVVHGALYVMSHGLIC--KQEGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGV 296
Query: 1028 ELRGNIFRTVKYESPEVTILTLSLEEPWALHKAKLMTRCRGTILGCTSLRM 1180
+K S +V IL + E P +A M+RCRGTILGC LR+
Sbjct: 297 IGPDRWNWDIKPMS-DVDILAVGGERP-TWRQAAPMSRCRGTILGCAQLRI 345